EDI_027650 | ubiquitin carboxyl-terminal hydrolase DUB-1, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_027650OTHER0.9999050.0000210.000073
No Results

  • Fasta :-

    >EDI_027650 MSLDVEQQIQRQINEFLPKKLKFIKTETINPIANKTISIDNRIDVDYDDIEELMKWKLKN GRNAGRGYFNAHSNCYMISILQVLTHTTPFYNYMIQQKIKVDDIFFKELERIIKEAFEKN NNQPLKPIIFEKNLKKLSSSLQRYQQEDATEFYLLLIDHLHEAIIGKGKNKISAISSIFH VELISRITCYNCTRFNDHDEHFSVLPIEITKQKTLESGFDQFFKKEMISHYHCEKCNTKS NASKCYFFKRLPWVLPIQLKRFTWDEKKINGKVTFPLQLNISKYGVDGLYDLYAIVVHLG KTKFSGHYISYCKTPSGGWFRFDDEEVKPVSIKVVLQEEAYMLFYSKSEERVSTTKEIKR AIESNDLEKLSTIVVKENEQKDKPTEIKEETVFVNNIFKSSRVKSVHQFINQKYQPIKRK PEEPQNNDIRGGKITSEEIEQKFKERQVETEPIPMITIRKKDGKQQKKLDIAGKPIKERK GIETFDLRKIPFGLNYSERVEGWDDETEEIRKNVLRNKVGAIDKEKETHISKLDQYDIEL DKPKERKLRKNMKNAFKVEDKKFNPFQYQSDKKRHQKERERNEGQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_027650.fa Sequence name : EDI_027650 Sequence length : 585 VALUES OF COMPUTED PARAMETERS Coef20 : 3.406 CoefTot : 0.234 ChDiff : 18 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.118 1.176 0.040 0.508 MesoH : -0.914 0.052 -0.503 0.173 MuHd_075 : 16.863 9.867 4.886 4.091 MuHd_095 : 40.293 28.715 10.782 9.050 MuHd_100 : 38.298 27.135 10.586 8.584 MuHd_105 : 31.657 22.874 9.138 7.499 Hmax_075 : -1.700 8.000 -1.380 3.370 Hmax_095 : 13.300 15.225 1.676 5.180 Hmax_100 : 12.400 15.500 1.293 5.280 Hmax_105 : 5.950 13.183 0.503 4.877 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6143 0.3857 DFMC : 0.7766 0.2234
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 585 EDI_027650 MSLDVEQQIQRQINEFLPKKLKFIKTETINPIANKTISIDNRIDVDYDDIEELMKWKLKNGRNAGRGYFNAHSNCYMISI 80 LQVLTHTTPFYNYMIQQKIKVDDIFFKELERIIKEAFEKNNNQPLKPIIFEKNLKKLSSSLQRYQQEDATEFYLLLIDHL 160 HEAIIGKGKNKISAISSIFHVELISRITCYNCTRFNDHDEHFSVLPIEITKQKTLESGFDQFFKKEMISHYHCEKCNTKS 240 NASKCYFFKRLPWVLPIQLKRFTWDEKKINGKVTFPLQLNISKYGVDGLYDLYAIVVHLGKTKFSGHYISYCKTPSGGWF 320 RFDDEEVKPVSIKVVLQEEAYMLFYSKSEERVSTTKEIKRAIESNDLEKLSTIVVKENEQKDKPTEIKEETVFVNNIFKS 400 SRVKSVHQFINQKYQPIKRKPEEPQNNDIRGGKITSEEIEQKFKERQVETEPIPMITIRKKDGKQQKKLDIAGKPIKERK 480 GIETFDLRKIPFGLNYSERVEGWDDETEEIRKNVLRNKVGAIDKEKETHISKLDQYDIELDKPKERKLRKNMKNAFKVED 560 KKFNPFQYQSDKKRHQKERERNEGQ 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ......................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_027650 11 VEQQIQR|QI 0.088 . EDI_027650 19 INEFLPK|KL 0.065 . EDI_027650 20 NEFLPKK|LK 0.087 . EDI_027650 22 FLPKKLK|FI 0.069 . EDI_027650 25 KKLKFIK|TE 0.062 . EDI_027650 35 INPIANK|TI 0.066 . EDI_027650 42 TISIDNR|ID 0.111 . EDI_027650 55 DIEELMK|WK 0.059 . EDI_027650 57 EELMKWK|LK 0.057 . EDI_027650 59 LMKWKLK|NG 0.068 . EDI_027650 62 WKLKNGR|NA 0.131 . EDI_027650 66 NGRNAGR|GY 0.104 . EDI_027650 98 NYMIQQK|IK 0.060 . EDI_027650 100 MIQQKIK|VD 0.069 . EDI_027650 107 VDDIFFK|EL 0.073 . EDI_027650 111 FFKELER|II 0.074 . EDI_027650 114 ELERIIK|EA 0.130 . EDI_027650 119 IKEAFEK|NN 0.065 . EDI_027650 126 NNNQPLK|PI 0.075 . EDI_027650 132 KPIIFEK|NL 0.071 . EDI_027650 135 IFEKNLK|KL 0.064 . EDI_027650 136 FEKNLKK|LS 0.095 . EDI_027650 143 LSSSLQR|YQ 0.104 . EDI_027650 167 HEAIIGK|GK 0.070 . EDI_027650 169 AIIGKGK|NK 0.067 . EDI_027650 171 IGKGKNK|IS 0.061 . EDI_027650 186 HVELISR|IT 0.072 . EDI_027650 194 TCYNCTR|FN 0.118 . EDI_027650 211 LPIEITK|QK 0.058 . EDI_027650 213 IEITKQK|TL 0.087 . EDI_027650 224 GFDQFFK|KE 0.060 . EDI_027650 225 FDQFFKK|EM 0.108 . EDI_027650 235 SHYHCEK|CN 0.067 . EDI_027650 239 CEKCNTK|SN 0.069 . EDI_027650 244 TKSNASK|CY 0.079 . EDI_027650 249 SKCYFFK|RL 0.077 . EDI_027650 250 KCYFFKR|LP 0.164 . EDI_027650 260 VLPIQLK|RF 0.060 . EDI_027650 261 LPIQLKR|FT 0.264 . EDI_027650 267 RFTWDEK|KI 0.062 . EDI_027650 268 FTWDEKK|IN 0.107 . EDI_027650 272 EKKINGK|VT 0.067 . EDI_027650 283 LQLNISK|YG 0.065 . EDI_027650 301 IVVHLGK|TK 0.059 . EDI_027650 303 VHLGKTK|FS 0.077 . EDI_027650 313 HYISYCK|TP 0.060 . EDI_027650 321 PSGGWFR|FD 0.116 . EDI_027650 328 FDDEEVK|PV 0.071 . EDI_027650 333 VKPVSIK|VV 0.084 . EDI_027650 347 YMLFYSK|SE 0.075 . EDI_027650 351 YSKSEER|VS 0.083 . EDI_027650 356 ERVSTTK|EI 0.068 . EDI_027650 359 STTKEIK|RA 0.065 . EDI_027650 360 TTKEIKR|AI 0.189 . EDI_027650 369 ESNDLEK|LS 0.064 . EDI_027650 376 LSTIVVK|EN 0.074 . EDI_027650 381 VKENEQK|DK 0.075 . EDI_027650 383 ENEQKDK|PT 0.102 . EDI_027650 388 DKPTEIK|EE 0.059 . EDI_027650 399 FVNNIFK|SS 0.076 . EDI_027650 402 NIFKSSR|VK 0.091 . EDI_027650 404 FKSSRVK|SV 0.173 . EDI_027650 413 HQFINQK|YQ 0.060 . EDI_027650 418 QKYQPIK|RK 0.062 . EDI_027650 419 KYQPIKR|KP 0.161 . EDI_027650 420 YQPIKRK|PE 0.102 . EDI_027650 430 PQNNDIR|GG 0.081 . EDI_027650 433 NDIRGGK|IT 0.181 . EDI_027650 442 SEEIEQK|FK 0.082 . EDI_027650 444 EIEQKFK|ER 0.059 . EDI_027650 446 EQKFKER|QV 0.171 . EDI_027650 459 IPMITIR|KK 0.129 . EDI_027650 460 PMITIRK|KD 0.094 . EDI_027650 461 MITIRKK|DG 0.120 . EDI_027650 464 IRKKDGK|QQ 0.070 . EDI_027650 467 KDGKQQK|KL 0.084 . EDI_027650 468 DGKQQKK|LD 0.100 . EDI_027650 474 KLDIAGK|PI 0.065 . EDI_027650 477 IAGKPIK|ER 0.065 . EDI_027650 479 GKPIKER|KG 0.086 . EDI_027650 480 KPIKERK|GI 0.130 . EDI_027650 488 IETFDLR|KI 0.079 . EDI_027650 489 ETFDLRK|IP 0.065 . EDI_027650 499 GLNYSER|VE 0.116 . EDI_027650 511 DETEEIR|KN 0.062 . EDI_027650 512 ETEEIRK|NV 0.073 . EDI_027650 516 IRKNVLR|NK 0.110 . EDI_027650 518 KNVLRNK|VG 0.056 . EDI_027650 524 KVGAIDK|EK 0.063 . EDI_027650 526 GAIDKEK|ET 0.070 . EDI_027650 532 KETHISK|LD 0.053 . EDI_027650 542 YDIELDK|PK 0.062 . EDI_027650 544 IELDKPK|ER 0.057 . EDI_027650 546 LDKPKER|KL 0.103 . EDI_027650 547 DKPKERK|LR 0.072 . EDI_027650 549 PKERKLR|KN 0.272 . EDI_027650 550 KERKLRK|NM 0.093 . EDI_027650 553 KLRKNMK|NA 0.105 . EDI_027650 557 NMKNAFK|VE 0.064 . EDI_027650 561 AFKVEDK|KF 0.064 . EDI_027650 562 FKVEDKK|FN 0.089 . EDI_027650 572 FQYQSDK|KR 0.068 . EDI_027650 573 QYQSDKK|RH 0.084 . EDI_027650 574 YQSDKKR|HQ 0.285 . EDI_027650 577 DKKRHQK|ER 0.179 . EDI_027650 579 KRHQKER|ER 0.161 . EDI_027650 581 HQKERER|NE 0.098 . ____________________________^_________________

  • Fasta :-

    >EDI_027650 ATGTCTTTAGATGTTGAACAACAAATTCAACGTCAAATTAATGAATTTCTTCCAAAAAAA TTGAAGTTTATCAAAACAGAAACGATAAATCCAATAGCAAATAAAACAATTAGTATTGAT AATAGGATAGATGTTGATTATGACGATATTGAAGAGTTAATGAAATGGAAATTAAAAAAC GGTAGAAATGCAGGGAGAGGATATTTTAATGCACATAGTAATTGTTATATGATTAGTATA TTACAAGTATTAACTCACACAACACCTTTTTATAATTATATGATACAACAAAAGATTAAA GTAGATGACATATTTTTTAAAGAATTAGAACGAATAATAAAAGAGGCGTTTGAAAAAAAT AATAATCAACCATTAAAACCAATAATATTTGAAAAAAATTTAAAAAAATTATCTTCTTCT TTACAAAGATATCAACAAGAAGATGCTACAGAATTTTATTTACTATTAATTGATCATCTT CATGAAGCAATAATTGGAAAAGGAAAAAATAAAATATCAGCTATTAGTAGTATATTTCAT GTTGAATTGATATCAAGAATTACATGTTATAATTGTACAAGATTTAATGACCATGACGAA CATTTTTCTGTATTACCAATTGAAATAACAAAACAAAAAACACTTGAAAGTGGATTTGAT CAATTCTTTAAAAAAGAAATGATTTCCCATTATCATTGTGAAAAATGTAATACAAAATCA AATGCTAGTAAATGTTATTTCTTTAAAAGATTACCTTGGGTATTGCCAATTCAACTAAAA AGATTTACTTGGGACGAAAAAAAAATTAATGGAAAAGTAACTTTTCCTTTGCAACTTAAC ATCTCAAAATATGGAGTAGATGGATTATATGATCTTTATGCAATTGTGGTTCATCTAGGA AAAACAAAATTTAGTGGTCATTATATTTCTTACTGTAAAACGCCAAGTGGTGGTTGGTTT AGATTTGATGATGAAGAAGTTAAACCTGTTTCAATTAAAGTAGTCTTACAAGAAGAGGCT TACATGTTATTCTATTCTAAATCAGAAGAGAGAGTCAGTACAACAAAAGAAATAAAAAGA GCAATTGAAAGTAATGACTTAGAAAAATTGAGTACTATTGTTGTGAAAGAAAATGAACAA AAAGATAAACCAACAGAAATAAAAGAAGAAACTGTTTTTGTTAATAATATATTTAAGTCT TCAAGAGTTAAATCAGTTCATCAATTCATCAACCAAAAATATCAACCAATTAAAAGAAAA CCTGAAGAACCACAAAATAATGATATAAGAGGTGGAAAAATTACTTCAGAAGAAATAGAA CAAAAGTTTAAAGAGAGACAAGTAGAAACTGAACCAATTCCAATGATCACTATACGTAAA AAAGATGGAAAGCAACAAAAAAAATTAGACATTGCTGGAAAGCCTATCAAAGAAAGAAAA GGTATTGAAACATTTGACTTAAGAAAAATTCCATTTGGTTTGAATTATAGTGAACGAGTA GAAGGGTGGGATGATGAGACAGAAGAAATAAGGAAGAATGTATTAAGAAATAAAGTTGGT GCTATTGATAAAGAAAAAGAAACCCATATCAGTAAATTAGACCAATATGATATTGAGTTA GATAAACCAAAAGAAAGAAAACTTAGAAAAAATATGAAGAATGCATTTAAAGTAGAAGAT AAAAAGTTTAATCCATTCCAATATCAATCTGATAAAAAAAGACACCAAAAAGAAAGGGAA AGAAATGAAGGACAATAA
  • Download Fasta

  • Fasta :-

    MSLDVEQQIQRQINEFLPKKLKFIKTETINPIANKTISIDNRIDVDYDDIEELMKWKLKN GRNAGRGYFNAHSNCYMISILQVLTHTTPFYNYMIQQKIKVDDIFFKELERIIKEAFEKN NNQPLKPIIFEKNLKKLSSSLQRYQQEDATEFYLLLIDHLHEAIIGKGKNKISAISSIFH VELISRITCYNCTRFNDHDEHFSVLPIEITKQKTLESGFDQFFKKEMISHYHCEKCNTKS NASKCYFFKRLPWVLPIQLKRFTWDEKKINGKVTFPLQLNISKYGVDGLYDLYAIVVHLG KTKFSGHYISYCKTPSGGWFRFDDEEVKPVSIKVVLQEEAYMLFYSKSEERVSTTKEIKR AIESNDLEKLSTIVVKENEQKDKPTEIKEETVFVNNIFKSSRVKSVHQFINQKYQPIKRK PEEPQNNDIRGGKITSEEIEQKFKERQVETEPIPMITIRKKDGKQQKKLDIAGKPIKERK GIETFDLRKIPFGLNYSERVEGWDDETEEIRKNVLRNKVGAIDKEKETHISKLDQYDIEL DKPKERKLRKNMKNAFKVEDKKFNPFQYQSDKKRHQKERERNEGQ

  • title: Active Site
  • coordinates: N70,C75,H307,D324
No Results
No Results
IDSitePeptideScoreMethod
EDI_027650353 SEERVSTTKE0.994unsp

EDI_027650      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India