EDI_037980 | hypothetical protein, conserved

_IDPredictionOTHERSPmTPCS_Position
EDI_037980SP0.1150820.8842190.000699CS pos: 14-15. HQC-IF. Pr: 0.2979
No Results

  • Fasta :-

    >EDI_037980 MIFLLIITTLGHQCIFNEINKNIKKSVLPTLKSARESSASWHPLRFSYDLIGLTDQSYAS QPWCKYAGETIVLSSSNIYKCSEDDVLTKEKIEYIDRLFQSLNQSISEIFNVHTINYNKV IPGKKQCGEAVFPRAYTIPEESDFHIMVTSHPHTSSSVFAYAAACYYGIDSQVNKRRSLM GYVNIVTSALEPTEERFRDQVGIIFHETMHALGFDGSLGVDKKVGNLNLKVVEDEVVVVR ARKHFGCDNMTYVPLEDGGGPGTANAHWERRIFISEIMNGITSNNPRISEITLAYFEALG VYKPNYEMADALSWGRGVGCSFLEDCSKWPKQNGYYCRTGVRRCTNDRSAIGICDGNSFK ETLNQSYQHYGDPHVGGSDEIADNCIFVSPIETSYCYKKMSLLSFDYYFTLEMLNHGQNF GDTSMCFESSLIKFIPYGINNYHCYSVACMNNSFYKISIDGRYYDCDKSIKVRGYGGKLI CADPKDICGNRVIETWPEIDSVENKTISVGDILFINGRNLDVVQKVYIDYTSCKIINKSK EQLQIEVDYRDPFISFTSFEASLMVKVNESVNSCYDHLIKIKVPYHYIFLNFGDWVMTNY IFIAVIPVWILFFILLFGYYILKVIVIRQAEEVHEAKREINLRLNKFDNKPQKKKQCFCV MF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_037980.fa Sequence name : EDI_037980 Sequence length : 662 VALUES OF COMPUTED PARAMETERS Coef20 : 4.082 CoefTot : -0.874 ChDiff : -6 ZoneTo : 35 KR : 5 DE : 1 CleavSite : 37 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.776 3.106 0.519 1.109 MesoH : 0.407 1.086 -0.161 0.497 MuHd_075 : 27.735 27.640 11.190 7.298 MuHd_095 : 46.450 34.570 15.034 10.717 MuHd_100 : 47.743 27.271 14.108 9.216 MuHd_105 : 46.458 20.677 13.114 7.955 Hmax_075 : 17.500 21.467 5.730 6.113 Hmax_095 : 17.675 19.950 3.922 6.449 Hmax_100 : 12.800 19.000 3.859 4.790 Hmax_105 : 9.800 7.400 1.365 2.928 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1174 0.8826 DFMC : 0.3076 0.6924 This protein is probably imported in mitochondria. f(Ser) = 0.0571 f(Arg) = 0.0286 CMi = 0.51948 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 662 EDI_037980 MIFLLIITTLGHQCIFNEINKNIKKSVLPTLKSARESSASWHPLRFSYDLIGLTDQSYASQPWCKYAGETIVLSSSNIYK 80 CSEDDVLTKEKIEYIDRLFQSLNQSISEIFNVHTINYNKVIPGKKQCGEAVFPRAYTIPEESDFHIMVTSHPHTSSSVFA 160 YAAACYYGIDSQVNKRRSLMGYVNIVTSALEPTEERFRDQVGIIFHETMHALGFDGSLGVDKKVGNLNLKVVEDEVVVVR 240 ARKHFGCDNMTYVPLEDGGGPGTANAHWERRIFISEIMNGITSNNPRISEITLAYFEALGVYKPNYEMADALSWGRGVGC 320 SFLEDCSKWPKQNGYYCRTGVRRCTNDRSAIGICDGNSFKETLNQSYQHYGDPHVGGSDEIADNCIFVSPIETSYCYKKM 400 SLLSFDYYFTLEMLNHGQNFGDTSMCFESSLIKFIPYGINNYHCYSVACMNNSFYKISIDGRYYDCDKSIKVRGYGGKLI 480 CADPKDICGNRVIETWPEIDSVENKTISVGDILFINGRNLDVVQKVYIDYTSCKIINKSKEQLQIEVDYRDPFISFTSFE 560 ASLMVKVNESVNSCYDHLIKIKVPYHYIFLNFGDWVMTNYIFIAVIPVWILFFILLFGYYILKVIVIRQAEEVHEAKREI 640 NLRLNKFDNKPQKKKQCFCVMF 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ...................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_037980 21 IFNEINK|NI 0.061 . EDI_037980 24 EINKNIK|KS 0.054 . EDI_037980 25 INKNIKK|SV 0.235 . EDI_037980 32 SVLPTLK|SA 0.081 . EDI_037980 35 PTLKSAR|ES 0.114 . EDI_037980 45 ASWHPLR|FS 0.113 . EDI_037980 65 ASQPWCK|YA 0.098 . EDI_037980 80 SSSNIYK|CS 0.087 . EDI_037980 89 EDDVLTK|EK 0.061 . EDI_037980 91 DVLTKEK|IE 0.055 . EDI_037980 97 KIEYIDR|LF 0.068 . EDI_037980 119 HTINYNK|VI 0.058 . EDI_037980 124 NKVIPGK|KQ 0.062 . EDI_037980 125 KVIPGKK|QC 0.103 . EDI_037980 134 GEAVFPR|AY 0.136 . EDI_037980 175 IDSQVNK|RR 0.065 . EDI_037980 176 DSQVNKR|RS 0.140 . EDI_037980 177 SQVNKRR|SL 0.368 . EDI_037980 196 LEPTEER|FR 0.098 . EDI_037980 198 PTEERFR|DQ 0.100 . EDI_037980 222 GSLGVDK|KV 0.075 . EDI_037980 223 SLGVDKK|VG 0.085 . EDI_037980 230 VGNLNLK|VV 0.078 . EDI_037980 240 DEVVVVR|AR 0.077 . EDI_037980 242 VVVVRAR|KH 0.087 . EDI_037980 243 VVVRARK|HF 0.214 . EDI_037980 270 ANAHWER|RI 0.127 . EDI_037980 271 NAHWERR|IF 0.174 . EDI_037980 287 ITSNNPR|IS 0.130 . EDI_037980 303 EALGVYK|PN 0.062 . EDI_037980 316 DALSWGR|GV 0.118 . EDI_037980 328 FLEDCSK|WP 0.059 . EDI_037980 331 DCSKWPK|QN 0.081 . EDI_037980 338 QNGYYCR|TG 0.075 . EDI_037980 342 YCRTGVR|RC 0.070 . EDI_037980 343 CRTGVRR|CT 0.140 . EDI_037980 348 RRCTNDR|SA 0.184 . EDI_037980 360 CDGNSFK|ET 0.062 . EDI_037980 398 ETSYCYK|KM 0.062 . EDI_037980 399 TSYCYKK|MS 0.108 . EDI_037980 433 FESSLIK|FI 0.073 . EDI_037980 456 MNNSFYK|IS 0.082 . EDI_037980 462 KISIDGR|YY 0.106 . EDI_037980 468 RYYDCDK|SI 0.074 . EDI_037980 471 DCDKSIK|VR 0.063 . EDI_037980 473 DKSIKVR|GY 0.195 . EDI_037980 478 VRGYGGK|LI 0.074 . EDI_037980 485 LICADPK|DI 0.082 . EDI_037980 491 KDICGNR|VI 0.088 . EDI_037980 505 IDSVENK|TI 0.089 . EDI_037980 518 ILFINGR|NL 0.097 . EDI_037980 525 NLDVVQK|VY 0.062 . EDI_037980 534 IDYTSCK|II 0.078 . EDI_037980 538 SCKIINK|SK 0.088 . EDI_037980 540 KIINKSK|EQ 0.071 . EDI_037980 550 QIEVDYR|DP 0.113 . EDI_037980 566 EASLMVK|VN 0.067 . EDI_037980 580 CYDHLIK|IK 0.055 . EDI_037980 582 DHLIKIK|VP 0.058 . EDI_037980 623 FGYYILK|VI 0.056 . EDI_037980 628 LKVIVIR|QA 0.129 . EDI_037980 637 EEVHEAK|RE 0.058 . EDI_037980 638 EVHEAKR|EI 0.145 . EDI_037980 643 KREINLR|LN 0.074 . EDI_037980 646 INLRLNK|FD 0.107 . EDI_037980 650 LNKFDNK|PQ 0.061 . EDI_037980 653 FDNKPQK|KK 0.067 . EDI_037980 654 DNKPQKK|KQ 0.091 . EDI_037980 655 NKPQKKK|QC 0.122 . ____________________________^_________________

  • Fasta :-

    >EDI_037980 ATGATTTTTTTGTTAATCATTACAACACTTGGACATCAATGTATTTTTAATGAAATCAAT AAAAACATTAAGAAAAGTGTATTACCAACACTAAAATCAGCAAGAGAGAGTAGTGCTAGT TGGCATCCTCTTCGATTTAGTTATGATTTAATAGGATTAACTGATCAGTCATATGCCAGT CAGCCATGGTGCAAGTACGCTGGTGAGACAATTGTTCTATCCTCATCGAACATTTATAAA TGTTCAGAAGATGATGTTTTAACAAAAGAAAAAATTGAGTATATTGATAGATTGTTTCAA AGTCTTAACCAGAGTATTTCCGAAATTTTTAATGTTCATACAATTAATTATAATAAAGTT ATTCCTGGTAAAAAACAATGTGGGGAAGCTGTATTTCCTAGGGCATATACTATCCCAGAA GAAAGTGATTTCCATATTATGGTAACTTCACATCCACATACTTCTTCTAGTGTATTTGCT TATGCTGCTGCGTGTTATTATGGCATAGATAGTCAAGTAAACAAACGACGTTCACTAATG GGATATGTAAATATTGTTACGTCAGCATTAGAACCAACTGAAGAACGTTTTAGAGATCAA GTTGGAATTATTTTTCATGAAACAATGCATGCACTTGGGTTTGATGGTAGCCTTGGTGTA GATAAAAAAGTTGGAAATTTGAATTTAAAAGTTGTAGAAGATGAGGTTGTTGTTGTTCGA GCAAGAAAACATTTTGGATGTGATAATATGACGTATGTTCCTCTTGAAGATGGAGGAGGA CCAGGTACAGCAAATGCACATTGGGAAAGAAGAATTTTTATATCAGAAATCATGAATGGT ATTACTTCAAATAATCCAAGAATCAGTGAAATAACATTAGCTTATTTTGAAGCTCTTGGA GTTTATAAACCAAATTATGAAATGGCTGATGCCTTATCCTGGGGAAGAGGTGTTGGATGT TCCTTTTTAGAAGATTGTTCTAAATGGCCCAAACAAAATGGATATTATTGTAGGACTGGT GTAAGAAGGTGTACTAATGATCGTTCTGCTATCGGTATATGTGATGGGAATTCATTTAAA GAAACGTTAAATCAATCATATCAACACTATGGAGATCCACATGTTGGTGGAAGTGATGAA ATTGCTGATAATTGTATATTTGTATCACCTATTGAAACTAGTTATTGTTATAAAAAAATG AGTTTATTATCATTTGACTATTACTTTACTTTAGAGATGCTTAATCATGGACAAAATTTT GGAGATACTTCAATGTGTTTTGAAAGTTCATTAATTAAATTTATACCTTATGGAATTAAT AACTATCATTGTTATTCAGTTGCTTGTATGAATAATTCATTTTATAAAATTTCAATTGAT GGTAGATATTACGATTGTGACAAATCAATTAAAGTTCGTGGATATGGAGGTAAATTAATT TGTGCAGATCCAAAAGATATTTGTGGTAATAGAGTTATAGAAACATGGCCTGAAATTGAT TCTGTAGAAAATAAAACAATTTCAGTTGGAGATATTTTATTTATTAATGGAAGGAATCTT GATGTTGTTCAAAAAGTATATATTGATTATACTTCATGTAAAATTATTAACAAATCAAAA GAACAACTTCAAATAGAAGTTGATTATCGTGACCCATTTATATCATTTACTTCATTTGAA GCATCGTTAATGGTTAAAGTAAATGAATCAGTAAATTCTTGCTATGATCATTTGATAAAA ATTAAAGTACCGTATCATTATATTTTCTTAAATTTTGGAGATTGGGTAATGACCAACTAC ATTTTTATTGCTGTCATTCCAGTATGGATTCTTTTCTTTATATTACTATTTGGATATTAC ATATTAAAGGTCATAGTAATAAGACAAGCAGAGGAAGTTCATGAAGCAAAACGAGAGATT AATCTTCGTTTAAATAAATTTGATAACAAACCACAAAAGAAAAAGCAATGCTTTTGTGTT ATGTTTTAA
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  • Fasta :-

    MIFLLIITTLGHQCIFNEINKNIKKSVLPTLKSARESSASWHPLRFSYDLIGLTDQSYAS QPWCKYAGETIVLSSSNIYKCSEDDVLTKEKIEYIDRLFQSLNQSISEIFNVHTINYNKV IPGKKQCGEAVFPRAYTIPEESDFHIMVTSHPHTSSSVFAYAAACYYGIDSQVNKRRSLM GYVNIVTSALEPTEERFRDQVGIIFHETMHALGFDGSLGVDKKVGNLNLKVVEDEVVVVR ARKHFGCDNMTYVPLEDGGGPGTANAHWERRIFISEIMNGITSNNPRISEITLAYFEALG VYKPNYEMADALSWGRGVGCSFLEDCSKWPKQNGYYCRTGVRRCTNDRSAIGICDGNSFK ETLNQSYQHYGDPHVGGSDEIADNCIFVSPIETSYCYKKMSLLSFDYYFTLEMLNHGQNF GDTSMCFESSLIKFIPYGINNYHCYSVACMNNSFYKISIDGRYYDCDKSIKVRGYGGKLI CADPKDICGNRVIETWPEIDSVENKTISVGDILFINGRNLDVVQKVYIDYTSCKIINKSK EQLQIEVDYRDPFISFTSFEASLMVKVNESVNSCYDHLIKIKVPYHYIFLNFGDWVMTNY IFIAVIPVWILFFILLFGYYILKVIVIRQAEEVHEAKREINLRLNKFDNKPQKKKQCFCV MF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_037980508 SNKTISVGDI0.992unspEDI_037980508 SNKTISVGDI0.992unspEDI_037980508 SNKTISVGDI0.992unspEDI_03798040 SESSASWHPL0.992unspEDI_037980358 SCDGNSFKET0.995unsp

EDI_037980      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India