EDI_043410 | cathepsin Q precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_043410SP0.0294940.9703120.000194CS pos: 21-22. VIP-KL. Pr: 0.3920
No Results

  • Fasta :-

    >EDI_043410 MSYLIIITTLIICSFSLKVIPKLEYLKGNENKLWEEWKIKYGKTYNSINEIHRKIIFMKN LIEIKTLNQKREKDIDAYFDLNQWSDLSNQEFEDLMLMKKPKRNNVKELHNKINITIPYP KGPVPINYSACNQKMLFGKLNPGEIDFCNGTEFDQQSCGSCYCVSNALALQLKWANLTYL RDGKPQYTMFSPQQFLDCEVGGYHCAGGYTDGPLDFSHYVSTIDDYPYYSGREPSKRKTC VKGKRTPIKFSYTIFDSAEDINIIKPIVHHYGGFVSCVYPKYWTAYRGGILRGLNCEKGV ITTHVVGVVGYGIEDGIEYVVVRNSWGKNWGLGGYIKLGADSLCGIGGNDGGDVPVSVVL HTDFSDVEYGPYGEFRNNTDVPQRLYNESADTNESSTNIESNDEASSESQSLNNHQSEES LVVEESSSVEPNIRPKNENRLRSIMIYILYLLVGISVITMVVAVIILITQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_043410.fa Sequence name : EDI_043410 Sequence length : 470 VALUES OF COMPUTED PARAMETERS Coef20 : 4.957 CoefTot : 0.188 ChDiff : -7 ZoneTo : 23 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.465 3.112 0.592 0.954 MesoH : -0.437 0.368 -0.276 0.303 MuHd_075 : 24.672 20.782 6.566 7.797 MuHd_095 : 19.739 9.028 7.144 3.180 MuHd_100 : 19.966 12.245 7.960 3.594 MuHd_105 : 21.814 18.965 8.826 5.154 Hmax_075 : 16.888 20.100 4.285 6.940 Hmax_095 : 17.400 19.000 4.752 6.270 Hmax_100 : 16.200 19.000 5.488 5.660 Hmax_105 : 17.500 22.800 5.846 6.510 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9441 0.0559 DFMC : 0.9654 0.0346
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 470 EDI_043410 MSYLIIITTLIICSFSLKVIPKLEYLKGNENKLWEEWKIKYGKTYNSINEIHRKIIFMKNLIEIKTLNQKREKDIDAYFD 80 LNQWSDLSNQEFEDLMLMKKPKRNNVKELHNKINITIPYPKGPVPINYSACNQKMLFGKLNPGEIDFCNGTEFDQQSCGS 160 CYCVSNALALQLKWANLTYLRDGKPQYTMFSPQQFLDCEVGGYHCAGGYTDGPLDFSHYVSTIDDYPYYSGREPSKRKTC 240 VKGKRTPIKFSYTIFDSAEDINIIKPIVHHYGGFVSCVYPKYWTAYRGGILRGLNCEKGVITTHVVGVVGYGIEDGIEYV 320 VVRNSWGKNWGLGGYIKLGADSLCGIGGNDGGDVPVSVVLHTDFSDVEYGPYGEFRNNTDVPQRLYNESADTNESSTNIE 400 SNDEASSESQSLNNHQSEESLVVEESSSVEPNIRPKNENRLRSIMIYILYLLVGISVITMVVAVIILITQ 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_043410 18 ICSFSLK|VI 0.067 . EDI_043410 22 SLKVIPK|LE 0.063 . EDI_043410 27 PKLEYLK|GN 0.065 . EDI_043410 32 LKGNENK|LW 0.070 . EDI_043410 38 KLWEEWK|IK 0.066 . EDI_043410 40 WEEWKIK|YG 0.064 . EDI_043410 43 WKIKYGK|TY 0.068 . EDI_043410 53 SINEIHR|KI 0.088 . EDI_043410 54 INEIHRK|II 0.099 . EDI_043410 59 RKIIFMK|NL 0.076 . EDI_043410 65 KNLIEIK|TL 0.061 . EDI_043410 70 IKTLNQK|RE 0.055 . EDI_043410 71 KTLNQKR|EK 0.138 . EDI_043410 73 LNQKREK|DI 0.099 . EDI_043410 99 EDLMLMK|KP 0.056 . EDI_043410 100 DLMLMKK|PK 0.081 . EDI_043410 102 MLMKKPK|RN 0.082 . EDI_043410 103 LMKKPKR|NN 0.199 . EDI_043410 107 PKRNNVK|EL 0.077 . EDI_043410 112 VKELHNK|IN 0.065 . EDI_043410 121 ITIPYPK|GP 0.063 . EDI_043410 134 YSACNQK|ML 0.078 . EDI_043410 139 QKMLFGK|LN 0.070 . EDI_043410 173 ALALQLK|WA 0.060 . EDI_043410 181 ANLTYLR|DG 0.091 . EDI_043410 184 TYLRDGK|PQ 0.099 . EDI_043410 232 YPYYSGR|EP 0.098 . EDI_043410 236 SGREPSK|RK 0.061 . EDI_043410 237 GREPSKR|KT 0.291 . EDI_043410 238 REPSKRK|TC 0.091 . EDI_043410 242 KRKTCVK|GK 0.074 . EDI_043410 244 KTCVKGK|RT 0.068 . EDI_043410 245 TCVKGKR|TP 0.140 . EDI_043410 249 GKRTPIK|FS 0.135 . EDI_043410 265 EDINIIK|PI 0.064 . EDI_043410 281 VSCVYPK|YW 0.084 . EDI_043410 287 KYWTAYR|GG 0.071 . EDI_043410 292 YRGGILR|GL 0.096 . EDI_043410 298 RGLNCEK|GV 0.072 . EDI_043410 323 IEYVVVR|NS 0.099 . EDI_043410 328 VRNSWGK|NW 0.087 . EDI_043410 337 GLGGYIK|LG 0.065 . EDI_043410 376 GPYGEFR|NN 0.136 . EDI_043410 384 NTDVPQR|LY 0.082 . EDI_043410 434 SVEPNIR|PK 0.077 . EDI_043410 436 EPNIRPK|NE 0.066 . EDI_043410 440 RPKNENR|LR 0.094 . EDI_043410 442 KNENRLR|SI 0.155 . ____________________________^_________________

  • Fasta :-

    >EDI_043410 ATGAGCTATCTGATTATTATTACAACATTGATTATATGTTCTTTTTCACTAAAAGTAATT CCAAAATTAGAATATTTAAAAGGAAATGAGAACAAACTTTGGGAAGAATGGAAAATAAAA TATGGAAAAACATATAATAGTATTAATGAAATTCATAGAAAAATAATTTTTATGAAAAAT TTAATAGAAATTAAAACGTTAAACCAAAAAAGAGAAAAAGATATTGATGCTTATTTTGAT TTAAATCAATGGAGTGATTTATCTAATCAAGAATTTGAGGATTTAATGTTAATGAAAAAA CCTAAAAGAAATAATGTGAAAGAATTACATAATAAAATTAATATTACTATTCCTTATCCA AAAGGTCCTGTTCCTATTAATTATTCTGCTTGTAATCAAAAAATGCTTTTCGGAAAGTTA AATCCTGGAGAAATTGATTTTTGTAATGGAACTGAGTTTGACCAACAGTCTTGTGGTTCA TGTTATTGTGTAAGTAATGCTCTTGCTCTTCAATTAAAATGGGCTAATCTCACTTATTTA AGAGATGGAAAACCTCAATACACAATGTTTAGTCCTCAACAATTTCTTGACTGTGAAGTT GGAGGATATCATTGTGCTGGAGGATATACTGATGGTCCATTAGATTTTTCACATTATGTT TCTACAATAGACGATTACCCTTATTACTCAGGCAGAGAACCATCAAAAAGAAAAACTTGT GTTAAAGGAAAAAGAACACCAATTAAATTCAGTTATACTATTTTTGATTCTGCAGAAGAT ATCAATATTATTAAACCAATTGTTCATCACTATGGTGGATTTGTTTCATGTGTTTATCCT AAATATTGGACTGCATATCGTGGAGGTATATTAAGGGGTCTTAATTGTGAAAAAGGAGTT ATCACAACTCACGTTGTTGGAGTTGTTGGATATGGTATTGAAGATGGTATTGAGTATGTT GTTGTCAGAAATTCTTGGGGTAAAAATTGGGGTCTTGGAGGCTATATTAAACTTGGAGCA GATTCTTTATGTGGTATTGGTGGGAATGATGGAGGAGATGTTCCTGTTTCAGTTGTTCTT CATACAGACTTCTCTGATGTAGAGTATGGACCATACGGTGAGTTTAGAAATAATACTGAT GTCCCTCAACGTCTATACAATGAGTCTGCAGACACAAATGAATCTTCAACTAATATCGAG AGTAATGATGAGGCATCAAGTGAAAGTCAAAGTTTAAATAACCATCAATCAGAAGAGAGT TTAGTAGTAGAAGAGTCTTCATCTGTGGAACCAAACATACGACCTAAAAATGAGAACCGT TTAAGGTCTATTATGATCTATATTTTATATTTACTTGTTGGAATTAGTGTTATTACTATG GTAGTTGCTGTTATAATTCTTATCACTCAATAA
  • Download Fasta

  • Fasta :-

    MSYLIIITTLIICSFSLKVIPKLEYLKGNENKLWEEWKIKYGKTYNSINEIHRKIIFMKN LIEIKTLNQKREKDIDAYFDLNQWSDLSNQEFEDLMLMKKPKRNNVKELHNKINITIPYP KGPVPINYSACNQKMLFGKLNPGEIDFCNGTEFDQQSCGSCYCVSNALALQLKWANLTYL RDGKPQYTMFSPQQFLDCEVGGYHCAGGYTDGPLDFSHYVSTIDDYPYYSGREPSKRKTC VKGKRTPIKFSYTIFDSAEDINIIKPIVHHYGGFVSCVYPKYWTAYRGGILRGLNCEKGV ITTHVVGVVGYGIEDGIEYVVVRNSWGKNWGLGGYIKLGADSLCGIGGNDGGDVPVSVVL HTDFSDVEYGPYGEFRNNTDVPQRLYNESADTNESSTNIESNDEASSESQSLNNHQSEES LVVEESSSVEPNIRPKNENRLRSIMIYILYLLVGISVITMVVAVIILITQ

  • title: active site
  • coordinates: Q155,C161,H304,N324
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_043410235 SGREPSKRKT0.995unspEDI_043410235 SGREPSKRKT0.995unspEDI_043410235 SGREPSKRKT0.995unspEDI_043410406 SNDEASSESQ0.991unspEDI_043410221 SSHYVSTIDD0.994unspEDI_043410230 SYPYYSGREP0.993unsp

EDI_043410      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India