EDI_044770 | 26S proteasome non-ATPase regulatory subunit, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_044770OTHER0.9997440.0000220.000234
No Results

  • Fasta :-

    >EDI_044770 MEHIKELQKERLRMEKRLEELTKYLNSPGIKDFKEVDEEGYPNPDGDMIISLRKIKHEFN CLKTDYKNLVDELTQSLYQIHEEALRYEQTNQQGEKITYDVQPLAIIKRIDSDSPAEKAG LQEGDIIIAFGGYKLKSDDKPLQKIAEITNQYTGTNGIEIDVTRKGEILRTKLYPDQYNE HPHCGFFIIPY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_044770.fa Sequence name : EDI_044770 Sequence length : 191 VALUES OF COMPUTED PARAMETERS Coef20 : 3.444 CoefTot : 0.000 ChDiff : -8 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.306 0.600 -0.246 0.414 MesoH : -1.769 -0.348 -0.691 0.033 MuHd_075 : 21.116 10.489 5.318 3.032 MuHd_095 : 36.031 18.628 9.549 7.450 MuHd_100 : 42.042 23.978 11.409 8.299 MuHd_105 : 36.545 22.634 10.432 6.777 Hmax_075 : -18.550 -1.283 -6.801 -0.700 Hmax_095 : -11.400 2.800 -5.027 0.600 Hmax_100 : -11.400 2.800 -4.652 0.600 Hmax_105 : -0.900 7.900 -2.074 1.530 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8482 0.1518 DFMC : 0.9329 0.0671
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 191 EDI_044770 MEHIKELQKERLRMEKRLEELTKYLNSPGIKDFKEVDEEGYPNPDGDMIISLRKIKHEFNCLKTDYKNLVDELTQSLYQI 80 HEEALRYEQTNQQGEKITYDVQPLAIIKRIDSDSPAEKAGLQEGDIIIAFGGYKLKSDDKPLQKIAEITNQYTGTNGIEI 160 DVTRKGEILRTKLYPDQYNEHPHCGFFIIPY 240 ................................................................................ 80 ................................................................................ 160 ............................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_044770 5 --MEHIK|EL 0.069 . EDI_044770 9 HIKELQK|ER 0.055 . EDI_044770 11 KELQKER|LR 0.082 . EDI_044770 13 LQKERLR|ME 0.071 . EDI_044770 16 ERLRMEK|RL 0.118 . EDI_044770 17 RLRMEKR|LE 0.118 . EDI_044770 23 RLEELTK|YL 0.068 . EDI_044770 31 LNSPGIK|DF 0.078 . EDI_044770 34 PGIKDFK|EV 0.080 . EDI_044770 53 DMIISLR|KI 0.091 . EDI_044770 54 MIISLRK|IK 0.069 . EDI_044770 56 ISLRKIK|HE 0.135 . EDI_044770 63 HEFNCLK|TD 0.065 . EDI_044770 67 CLKTDYK|NL 0.069 . EDI_044770 86 IHEEALR|YE 0.082 . EDI_044770 96 TNQQGEK|IT 0.085 . EDI_044770 108 QPLAIIK|RI 0.060 . EDI_044770 109 PLAIIKR|ID 0.224 . EDI_044770 118 SDSPAEK|AG 0.076 . EDI_044770 134 IAFGGYK|LK 0.060 . EDI_044770 136 FGGYKLK|SD 0.081 . EDI_044770 140 KLKSDDK|PL 0.063 . EDI_044770 144 DDKPLQK|IA 0.065 . EDI_044770 164 IEIDVTR|KG 0.087 . EDI_044770 165 EIDVTRK|GE 0.064 . EDI_044770 170 RKGEILR|TK 0.065 . EDI_044770 172 GEILRTK|LY 0.065 . ____________________________^_________________

  • Fasta :-

    >EDI_044770 ATGGAACACATCAAAGAATTACAAAAAGAACGTTTAAGAATGGAAAAACGACTTGAGGAA TTAACAAAATATTTAAACTCTCCTGGAATCAAAGATTTTAAAGAAGTAGATGAAGAAGGA TATCCAAATCCAGATGGTGATATGATTATATCTCTAAGAAAGATTAAACATGAATTTAAT TGTCTTAAAACAGATTATAAGAATCTAGTAGATGAATTAACTCAATCATTATATCAAATC CATGAAGAAGCATTACGTTATGAACAAACTAATCAACAAGGAGAAAAAATAACATATGAC GTCCAACCATTAGCTATTATTAAAAGAATTGATTCTGACTCTCCAGCAGAAAAAGCTGGT TTACAAGAAGGAGATATTATTATTGCTTTTGGTGGATATAAATTAAAATCTGATGATAAA CCATTACAAAAAATAGCAGAAATTACTAATCAATATACTGGAACAAATGGAATTGAAATT GACGTAACAAGAAAAGGGGAAATATTAAGAACAAAATTATATCCAGACCAATACAATGAA CACCCTCATTGTGGGTTTTTTATAATTCCTTACTAA
  • Download Fasta

  • Fasta :-

    MEHIKELQKERLRMEKRLEELTKYLNSPGIKDFKEVDEEGYPNPDGDMIISLRKIKHEFN CLKTDYKNLVDELTQSLYQIHEEALRYEQTNQQGEKITYDVQPLAIIKRIDSDSPAEKAG LQEGDIIIAFGGYKLKSDDKPLQKIAEITNQYTGTNGIEIDVTRKGEILRTKLYPDQYNE HPHCGFFIIPY

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_044770114 SIDSDSPAEK0.995unspEDI_044770114 SIDSDSPAEK0.995unspEDI_044770114 SIDSDSPAEK0.995unspEDI_04477041 YDEEGYPNPD0.991unspEDI_044770112 SKRIDSDSPA0.994unsp

EDI_044770      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India