EDI_044950 | 26S protease regulatory subunit 6B, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_044950OTHER0.9999390.0000390.000022
No Results

  • Fasta :-

    >EDI_044950 MSETKHQLRDAYLKMKSLQADLDHLRLIDGYIHEEQQALRLELSRAQEEVKRVQSVPLHI GQFVEMVDKDTAVVTLSSGTTQFVRILSTINRELLKPGTSVAHHKQSNALVDVLPPEADS AIRILSKGETPNVTYADIGGCDIQKQEIREAVELPLTQSELYKQIGIDPPRGCLLYGPPG TGKTMLAKAVAHHTSASFIQIVGSEFAQQYLGEGPRMVRDVFRLARENAPSIVFIDEVDS IATKRHDAQNGADREVQRVLLELLTQMDGFDQTTNVKVIMATNRADSLDPALLRPGRLDR KIEFPLPDRRQKRLIFQVLTSKMNLSKEIDLEDYASRPDKISGAEIASICQEAGMHAVRK NRYIILPADFEKAYKKVVRKQTQAMDFYR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_044950.fa Sequence name : EDI_044950 Sequence length : 389 VALUES OF COMPUTED PARAMETERS Coef20 : 3.827 CoefTot : 0.112 ChDiff : 0 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.729 0.971 0.006 0.366 MesoH : -0.705 0.151 -0.414 0.159 MuHd_075 : 17.726 9.311 5.387 3.719 MuHd_095 : 21.854 10.892 5.842 4.283 MuHd_100 : 29.600 16.659 7.458 5.597 MuHd_105 : 32.856 19.067 8.090 5.855 Hmax_075 : 1.300 5.100 -1.161 2.590 Hmax_095 : 2.900 3.600 -2.303 1.820 Hmax_100 : 14.500 11.200 1.316 4.310 Hmax_105 : 2.013 4.463 -2.719 1.488 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9165 0.0835 DFMC : 0.8091 0.1909
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 389 EDI_044950 MSETKHQLRDAYLKMKSLQADLDHLRLIDGYIHEEQQALRLELSRAQEEVKRVQSVPLHIGQFVEMVDKDTAVVTLSSGT 80 TQFVRILSTINRELLKPGTSVAHHKQSNALVDVLPPEADSAIRILSKGETPNVTYADIGGCDIQKQEIREAVELPLTQSE 160 LYKQIGIDPPRGCLLYGPPGTGKTMLAKAVAHHTSASFIQIVGSEFAQQYLGEGPRMVRDVFRLARENAPSIVFIDEVDS 240 IATKRHDAQNGADREVQRVLLELLTQMDGFDQTTNVKVIMATNRADSLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVLT 320 SKMNLSKEIDLEDYASRPDKISGAEIASICQEAGMHAVRKNRYIILPADFEKAYKKVVRKQTQAMDFYR 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................................................P....... 320 ..................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EDI_044950 5 --MSETK|HQ 0.054 . EDI_044950 9 ETKHQLR|DA 0.125 . EDI_044950 14 LRDAYLK|MK 0.064 . EDI_044950 16 DAYLKMK|SL 0.098 . EDI_044950 26 ADLDHLR|LI 0.096 . EDI_044950 40 EEQQALR|LE 0.062 . EDI_044950 45 LRLELSR|AQ 0.094 . EDI_044950 51 RAQEEVK|RV 0.075 . EDI_044950 52 AQEEVKR|VQ 0.150 . EDI_044950 69 FVEMVDK|DT 0.068 . EDI_044950 85 GTTQFVR|IL 0.103 . EDI_044950 92 ILSTINR|EL 0.100 . EDI_044950 96 INRELLK|PG 0.065 . EDI_044950 105 TSVAHHK|QS 0.082 . EDI_044950 123 EADSAIR|IL 0.112 . EDI_044950 127 AIRILSK|GE 0.066 . EDI_044950 145 GGCDIQK|QE 0.059 . EDI_044950 149 IQKQEIR|EA 0.098 . EDI_044950 163 TQSELYK|QI 0.097 . EDI_044950 171 IGIDPPR|GC 0.083 . EDI_044950 183 GPPGTGK|TM 0.059 . EDI_044950 188 GKTMLAK|AV 0.087 . EDI_044950 216 YLGEGPR|MV 0.145 . EDI_044950 219 EGPRMVR|DV 0.294 . EDI_044950 223 MVRDVFR|LA 0.128 . EDI_044950 226 DVFRLAR|EN 0.208 . EDI_044950 244 VDSIATK|RH 0.066 . EDI_044950 245 DSIATKR|HD 0.191 . EDI_044950 254 AQNGADR|EV 0.136 . EDI_044950 258 ADREVQR|VL 0.105 . EDI_044950 277 DQTTNVK|VI 0.057 . EDI_044950 284 VIMATNR|AD 0.082 . EDI_044950 294 LDPALLR|PG 0.070 . EDI_044950 297 ALLRPGR|LD 0.217 . EDI_044950 300 RPGRLDR|KI 0.309 . EDI_044950 301 PGRLDRK|IE 0.069 . EDI_044950 309 EFPLPDR|RQ 0.062 . EDI_044950 310 FPLPDRR|QK 0.103 . EDI_044950 312 LPDRRQK|RL 0.131 . EDI_044950 313 PDRRQKR|LI 0.760 *ProP* EDI_044950 322 FQVLTSK|MN 0.058 . EDI_044950 327 SKMNLSK|EI 0.069 . EDI_044950 337 LEDYASR|PD 0.079 . EDI_044950 340 YASRPDK|IS 0.297 . EDI_044950 359 AGMHAVR|KN 0.082 . EDI_044950 360 GMHAVRK|NR 0.109 . EDI_044950 362 HAVRKNR|YI 0.262 . EDI_044950 372 LPADFEK|AY 0.076 . EDI_044950 375 DFEKAYK|KV 0.071 . EDI_044950 376 FEKAYKK|VV 0.153 . EDI_044950 379 AYKKVVR|KQ 0.110 . EDI_044950 380 YKKVVRK|QT 0.108 . EDI_044950 389 QAMDFYR|-- 0.110 . ____________________________^_________________

  • Fasta :-

    >EDI_044950 ATGAGTGAAACAAAACATCAATTAAGAGACGCATATTTAAAAATGAAATCCCTTCAGGCA GACTTAGATCATTTGAGATTGATTGATGGATATATTCATGAAGAGCAACAAGCCCTTAGA TTAGAATTATCACGAGCACAAGAAGAAGTCAAAAGGGTTCAAAGTGTACCATTGCATATT GGTCAATTTGTTGAGATGGTAGACAAAGACACAGCTGTTGTAACTCTTTCTAGTGGAACA ACACAGTTTGTTCGTATTTTATCTACCATTAATAGAGAACTTCTTAAACCAGGAACTTCT GTTGCACATCATAAACAATCAAACGCTTTAGTTGATGTATTACCACCAGAGGCCGATAGT GCCATTAGAATATTATCTAAAGGAGAGACACCAAATGTAACATATGCTGATATCGGAGGG TGTGACATCCAAAAACAAGAAATTAGAGAAGCTGTAGAACTTCCATTAACTCAAAGTGAA TTATATAAACAAATTGGTATTGATCCACCACGTGGATGTTTATTATATGGACCACCAGGG ACTGGAAAAACTATGTTAGCTAAAGCTGTTGCACATCACACTTCTGCTTCTTTTATCCAA ATTGTTGGATCTGAATTTGCACAACAATACCTTGGAGAAGGTCCAAGGATGGTTAGAGAT GTTTTCAGATTAGCACGTGAAAATGCACCATCTATTGTATTTATTGATGAAGTTGATTCA ATTGCTACAAAACGTCATGATGCACAAAATGGAGCTGACCGAGAAGTTCAAAGAGTTTTA TTAGAGTTGTTAACTCAAATGGATGGATTTGATCAAACAACCAACGTTAAAGTAATTATG GCAACAAATAGAGCTGACTCATTAGATCCAGCATTATTAAGACCTGGAAGACTTGATAGA AAAATTGAATTTCCATTACCAGATAGAAGGCAAAAGAGGTTAATCTTCCAAGTACTTACA TCTAAAATGAATCTTTCTAAAGAAATTGACTTAGAAGATTATGCTTCACGTCCTGATAAA ATCAGTGGTGCTGAAATAGCTTCTATTTGCCAAGAAGCTGGTATGCACGCAGTAAGAAAG AATAGATATATTATTCTTCCTGCTGATTTTGAGAAAGCTTACAAGAAAGTTGTTAGAAAA CAAACACAAGCAATGGACTTTTACAGATAA
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  • Fasta :-

    MSETKHQLRDAYLKMKSLQADLDHLRLIDGYIHEEQQALRLELSRAQEEVKRVQSVPLHI GQFVEMVDKDTAVVTLSSGTTQFVRILSTINRELLKPGTSVAHHKQSNALVDVLPPEADS AIRILSKGETPNVTYADIGGCDIQKQEIREAVELPLTQSELYKQIGIDPPRGCLLYGPPG TGKTMLAKAVAHHTSASFIQIVGSEFAQQYLGEGPRMVRDVFRLARENAPSIVFIDEVDS IATKRHDAQNGADREVQRVLLELLTQMDGFDQTTNVKVIMATNRADSLDPALLRPGRLDR KIEFPLPDRRQKRLIFQVLTSKMNLSKEIDLEDYASRPDKISGAEIASICQEAGMHAVRK NRYIILPADFEKAYKKVVRKQTQAMDFYR

  • title: ATP binding site
  • coordinates: P178,P179,G180,T181,G182,K183,T184,M185,D236,N283
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_044950126 SIRILSKGET0.996unspEDI_044950287 SNRADSLDPA0.995unsp

EDI_044950      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India