EDI_076230 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_076230OTHER0.9670090.0007650.032226
No Results

  • Fasta :-

    >EDI_076230 MSQPVKLKSLNLKKAYPLFGIKNFRSTCFANSVFQVLCSLPPFVEYLKEVIPTDDMKYTK AMKEMLNLFLQCDKVGIQKDIIDPPQSMKEIIMKLQTESGQHQMDATEFYTTLINCLHTE CKNKISEGEETKQEDDDGWEEVGKKSKKIQLRSEKTDGTSIISDYFRGSMRSLTITIDEK KKKQNQAVSQEFYVLSLPIQSKQNCVSSVSQAINLAFSKRKIDNTHFQQLFIEEAPKLLV LQLNRFIYDRVKLDVVKLVDHINYTESLQLKTNKGNVSYRLISIIEHRGNQIRRGHYVCY VRRGEKWYFCNDESIQPIEQKDIYDKMAYVLVYSSLN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_076230.fa Sequence name : EDI_076230 Sequence length : 337 VALUES OF COMPUTED PARAMETERS Coef20 : 3.573 CoefTot : -0.987 ChDiff : 7 ZoneTo : 44 KR : 6 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.294 1.388 0.213 0.503 MesoH : -0.986 0.149 -0.501 0.132 MuHd_075 : 28.799 19.423 9.456 6.572 MuHd_095 : 26.911 23.079 7.179 6.093 MuHd_100 : 20.414 24.813 5.364 6.924 MuHd_105 : 24.864 22.426 5.175 7.031 Hmax_075 : 9.333 17.500 0.004 6.670 Hmax_095 : 7.788 21.613 0.863 6.820 Hmax_100 : 2.200 25.800 -1.463 7.900 Hmax_105 : 16.700 24.800 -0.454 6.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3774 0.6226 DFMC : 0.6167 0.3833
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 337 EDI_076230 MSQPVKLKSLNLKKAYPLFGIKNFRSTCFANSVFQVLCSLPPFVEYLKEVIPTDDMKYTKAMKEMLNLFLQCDKVGIQKD 80 IIDPPQSMKEIIMKLQTESGQHQMDATEFYTTLINCLHTECKNKISEGEETKQEDDDGWEEVGKKSKKIQLRSEKTDGTS 160 IISDYFRGSMRSLTITIDEKKKKQNQAVSQEFYVLSLPIQSKQNCVSSVSQAINLAFSKRKIDNTHFQQLFIEEAPKLLV 240 LQLNRFIYDRVKLDVVKLVDHINYTESLQLKTNKGNVSYRLISIIEHRGNQIRRGHYVCYVRRGEKWYFCNDESIQPIEQ 320 KDIYDKMAYVLVYSSLN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_076230 6 -MSQPVK|LK 0.067 . EDI_076230 8 SQPVKLK|SL 0.080 . EDI_076230 13 LKSLNLK|KA 0.080 . EDI_076230 14 KSLNLKK|AY 0.074 . EDI_076230 22 YPLFGIK|NF 0.052 . EDI_076230 25 FGIKNFR|ST 0.134 . EDI_076230 48 PFVEYLK|EV 0.065 . EDI_076230 57 IPTDDMK|YT 0.075 . EDI_076230 60 DDMKYTK|AM 0.067 . EDI_076230 63 KYTKAMK|EM 0.054 . EDI_076230 74 LFLQCDK|VG 0.054 . EDI_076230 79 DKVGIQK|DI 0.072 . EDI_076230 89 DPPQSMK|EI 0.076 . EDI_076230 94 MKEIIMK|LQ 0.071 . EDI_076230 122 CLHTECK|NK 0.067 . EDI_076230 124 HTECKNK|IS 0.076 . EDI_076230 132 SEGEETK|QE 0.066 . EDI_076230 144 GWEEVGK|KS 0.066 . EDI_076230 145 WEEVGKK|SK 0.155 . EDI_076230 147 EVGKKSK|KI 0.058 . EDI_076230 148 VGKKSKK|IQ 0.105 . EDI_076230 152 SKKIQLR|SE 0.150 . EDI_076230 155 IQLRSEK|TD 0.136 . EDI_076230 167 IISDYFR|GS 0.139 . EDI_076230 171 YFRGSMR|SL 0.145 . EDI_076230 180 TITIDEK|KK 0.058 . EDI_076230 181 ITIDEKK|KK 0.085 . EDI_076230 182 TIDEKKK|KQ 0.115 . EDI_076230 183 IDEKKKK|QN 0.128 . EDI_076230 202 SLPIQSK|QN 0.065 . EDI_076230 219 INLAFSK|RK 0.060 . EDI_076230 220 NLAFSKR|KI 0.276 . EDI_076230 221 LAFSKRK|ID 0.099 . EDI_076230 237 FIEEAPK|LL 0.059 . EDI_076230 245 LVLQLNR|FI 0.081 . EDI_076230 250 NRFIYDR|VK 0.085 . EDI_076230 252 FIYDRVK|LD 0.058 . EDI_076230 257 VKLDVVK|LV 0.078 . EDI_076230 271 TESLQLK|TN 0.066 . EDI_076230 274 LQLKTNK|GN 0.064 . EDI_076230 280 KGNVSYR|LI 0.199 . EDI_076230 288 ISIIEHR|GN 0.100 . EDI_076230 293 HRGNQIR|RG 0.095 . EDI_076230 294 RGNQIRR|GH 0.138 . EDI_076230 302 HYVCYVR|RG 0.071 . EDI_076230 303 YVCYVRR|GE 0.121 . EDI_076230 306 YVRRGEK|WY 0.106 . EDI_076230 321 IQPIEQK|DI 0.088 . EDI_076230 326 QKDIYDK|MA 0.067 . ____________________________^_________________

  • Fasta :-

    >EDI_076230 ATGTCACAACCTGTAAAACTTAAGTCATTGAATTTAAAGAAAGCATACCCATTATTTGGC ATTAAAAATTTTAGGTCAACGTGTTTTGCTAATAGTGTATTCCAAGTGTTATGTTCTTTA CCACCATTTGTTGAATATTTAAAAGAGGTAATTCCTACAGATGATATGAAATATACAAAA GCAATGAAAGAGATGCTTAATTTATTTCTTCAGTGTGACAAAGTTGGAATTCAAAAAGAT ATTATTGATCCACCTCAATCAATGAAGGAGATTATTATGAAATTACAAACAGAAAGTGGT CAACACCAAATGGACGCAACAGAATTTTATACTACTTTAATTAATTGTTTACACACTGAA TGTAAAAATAAAATATCTGAAGGAGAAGAAACAAAACAAGAAGACGATGATGGATGGGAA GAAGTTGGAAAAAAATCAAAAAAAATTCAATTAAGAAGTGAAAAAACTGATGGAACAAGT ATAATTTCTGATTACTTTAGAGGAAGTATGAGGTCATTGACAATAACTATTGATGAAAAG AAAAAAAAACAAAATCAAGCTGTGTCACAAGAGTTTTATGTTTTATCATTACCTATTCAG TCTAAACAAAACTGTGTTAGTTCTGTTAGTCAAGCAATTAACTTAGCTTTCTCAAAAAGA AAAATTGATAACACACATTTTCAACAATTATTTATTGAAGAAGCACCAAAATTATTAGTA TTACAATTAAATCGTTTTATTTATGATCGTGTAAAATTAGATGTTGTTAAATTAGTAGAT CATATCAATTATACTGAATCTCTTCAACTAAAAACAAATAAAGGAAATGTAAGTTATAGA CTTATAAGTATTATTGAGCATCGTGGGAATCAAATTAGAAGAGGACATTATGTATGTTAT GTTAGAAGAGGTGAGAAATGGTATTTTTGTAATGATGAAAGTATTCAACCTATTGAACAA AAAGATATTTATGATAAGATGGCATATGTTTTAGTTTATTCTTCTTTAAATTAA
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  • Fasta :-

    MSQPVKLKSLNLKKAYPLFGIKNFRSTCFANSVFQVLCSLPPFVEYLKEVIPTDDMKYTK AMKEMLNLFLQCDKVGIQKDIIDPPQSMKEIIMKLQTESGQHQMDATEFYTTLINCLHTE CKNKISEGEETKQEDDDGWEEVGKKSKKIQLRSEKTDGTSIISDYFRGSMRSLTITIDEK KKKQNQAVSQEFYVLSLPIQSKQNCVSSVSQAINLAFSKRKIDNTHFQQLFIEEAPKLLV LQLNRFIYDRVKLDVVKLVDHINYTESLQLKTNKGNVSYRLISIIEHRGNQIRRGHYVCY VRRGEKWYFCNDESIQPIEQKDIYDKMAYVLVYSSLN

    No Results
  • title: Active Site
  • coordinates: N23,C28,H296,D312
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_076230218 SNLAFSKRKI0.992unspEDI_076230218 SNLAFSKRKI0.992unspEDI_076230218 SNLAFSKRKI0.992unspEDI_076230283 SYRLISIIEH0.996unspEDI_07623087 SDPPQSMKEI0.997unspEDI_076230169 SYFRGSMRSL0.992unsp

EDI_076230      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India