EDI_077850 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
EDI_077850OTHER0.8033220.1962200.000457
No Results

  • Fasta :-

    >EDI_077850 MEQPTKKAVIPFWILWSGLIVLNLFILIVTITSACLLGNEIDNVFVEKERFLNSTKKYMS YYNTMTGIENQIKDIPSWVYSAIAFCEASYRKNGLEKGYLESDEYVGFDEEIFYSTLKRL CQEKSNKYCNVVENNGSPELLYYLYELFGNELVKGISPRGYVSDLSKNPIKFDITGIHSV YTKSNVTKLMKDSGLPLTLSFGTFKRRYSVPCSNSFGYVCPNNLPKVPCPSSLGGDCVVL TFNPYSQSGVYDYLGDLHYNKKHSVLVVGWNDEKRIDRSWGNDLHNFFDGGYIVKNSFGY QHGHSLKYWLQQHSIKEEMQICPNVRSFEQWTPLDEDCINKYSYTECCNQYIKRGVKKYI NATITPLICDSSKDDKYQGIFKCDTSRIYFIKSKKHSFGPYKSYGTLDITPINGINMFTI KLLSFKRDMTDKQTITIQPTCPEMLEDIFKASYTKSDEEATTNTEECGYDFIPFKVLEKY NENYVVDGLHAPAFSIFDIKWDDQSYLNSHTQGMDYSAIQSATKKVYQTVFKGPYDMN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_077850.fa Sequence name : EDI_077850 Sequence length : 538 VALUES OF COMPUTED PARAMETERS Coef20 : 3.857 CoefTot : -0.528 ChDiff : -3 ZoneTo : 39 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.176 2.529 0.473 0.926 MesoH : -0.207 0.575 -0.273 0.317 MuHd_075 : 29.296 24.028 10.470 6.495 MuHd_095 : 24.425 10.692 5.028 4.474 MuHd_100 : 22.023 12.628 6.243 4.571 MuHd_105 : 18.205 14.226 6.320 3.699 Hmax_075 : 18.200 23.450 4.464 7.058 Hmax_095 : 14.787 23.713 0.629 5.661 Hmax_100 : 17.200 23.600 1.703 6.370 Hmax_105 : 7.100 26.717 -0.351 4.570 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9816 0.0184 DFMC : 0.9678 0.0322
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 538 EDI_077850 MEQPTKKAVIPFWILWSGLIVLNLFILIVTITSACLLGNEIDNVFVEKERFLNSTKKYMSYYNTMTGIENQIKDIPSWVY 80 SAIAFCEASYRKNGLEKGYLESDEYVGFDEEIFYSTLKRLCQEKSNKYCNVVENNGSPELLYYLYELFGNELVKGISPRG 160 YVSDLSKNPIKFDITGIHSVYTKSNVTKLMKDSGLPLTLSFGTFKRRYSVPCSNSFGYVCPNNLPKVPCPSSLGGDCVVL 240 TFNPYSQSGVYDYLGDLHYNKKHSVLVVGWNDEKRIDRSWGNDLHNFFDGGYIVKNSFGYQHGHSLKYWLQQHSIKEEMQ 320 ICPNVRSFEQWTPLDEDCINKYSYTECCNQYIKRGVKKYINATITPLICDSSKDDKYQGIFKCDTSRIYFIKSKKHSFGP 400 YKSYGTLDITPINGINMFTIKLLSFKRDMTDKQTITIQPTCPEMLEDIFKASYTKSDEEATTNTEECGYDFIPFKVLEKY 480 NENYVVDGLHAPAFSIFDIKWDDQSYLNSHTQGMDYSAIQSATKKVYQTVFKGPYDMN 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .....................................P.......................................... 320 ................................................................................ 400 ................................................................................ 480 .......................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EDI_077850 6 -MEQPTK|KA 0.059 . EDI_077850 7 MEQPTKK|AV 0.144 . EDI_077850 48 DNVFVEK|ER 0.058 . EDI_077850 50 VFVEKER|FL 0.085 . EDI_077850 56 RFLNSTK|KY 0.063 . EDI_077850 57 FLNSTKK|YM 0.146 . EDI_077850 73 GIENQIK|DI 0.071 . EDI_077850 91 FCEASYR|KN 0.088 . EDI_077850 92 CEASYRK|NG 0.067 . EDI_077850 97 RKNGLEK|GY 0.071 . EDI_077850 118 IFYSTLK|RL 0.060 . EDI_077850 119 FYSTLKR|LC 0.145 . EDI_077850 124 KRLCQEK|SN 0.081 . EDI_077850 127 CQEKSNK|YC 0.078 . EDI_077850 154 FGNELVK|GI 0.080 . EDI_077850 159 VKGISPR|GY 0.103 . EDI_077850 167 YVSDLSK|NP 0.062 . EDI_077850 171 LSKNPIK|FD 0.090 . EDI_077850 183 IHSVYTK|SN 0.100 . EDI_077850 188 TKSNVTK|LM 0.085 . EDI_077850 191 NVTKLMK|DS 0.068 . EDI_077850 205 LSFGTFK|RR 0.060 . EDI_077850 206 SFGTFKR|RY 0.156 . EDI_077850 207 FGTFKRR|YS 0.129 . EDI_077850 226 CPNNLPK|VP 0.065 . EDI_077850 261 GDLHYNK|KH 0.060 . EDI_077850 262 DLHYNKK|HS 0.094 . EDI_077850 274 VGWNDEK|RI 0.059 . EDI_077850 275 GWNDEKR|ID 0.190 . EDI_077850 278 DEKRIDR|SW 0.506 *ProP* EDI_077850 295 DGGYIVK|NS 0.065 . EDI_077850 307 QHGHSLK|YW 0.075 . EDI_077850 316 LQQHSIK|EE 0.072 . EDI_077850 326 QICPNVR|SF 0.146 . EDI_077850 341 DEDCINK|YS 0.060 . EDI_077850 353 CCNQYIK|RG 0.055 . EDI_077850 354 CNQYIKR|GV 0.421 . EDI_077850 357 YIKRGVK|KY 0.105 . EDI_077850 358 IKRGVKK|YI 0.174 . EDI_077850 373 LICDSSK|DD 0.070 . EDI_077850 376 DSSKDDK|YQ 0.078 . EDI_077850 382 KYQGIFK|CD 0.056 . EDI_077850 387 FKCDTSR|IY 0.082 . EDI_077850 392 SRIYFIK|SK 0.109 . EDI_077850 394 IYFIKSK|KH 0.063 . EDI_077850 395 YFIKSKK|HS 0.095 . EDI_077850 402 HSFGPYK|SY 0.105 . EDI_077850 421 INMFTIK|LL 0.077 . EDI_077850 426 IKLLSFK|RD 0.060 . EDI_077850 427 KLLSFKR|DM 0.258 . EDI_077850 432 KRDMTDK|QT 0.090 . EDI_077850 450 MLEDIFK|AS 0.072 . EDI_077850 455 FKASYTK|SD 0.084 . EDI_077850 475 YDFIPFK|VL 0.067 . EDI_077850 479 PFKVLEK|YN 0.064 . EDI_077850 500 FSIFDIK|WD 0.068 . EDI_077850 524 AIQSATK|KV 0.072 . EDI_077850 525 IQSATKK|VY 0.135 . EDI_077850 532 VYQTVFK|GP 0.068 . ____________________________^_________________

  • Fasta :-

    >EDI_077850 ATGGAACAACCAACGAAAAAAGCAGTTATTCCATTTTGGATTTTATGGAGTGGATTAATT GTATTAAATTTATTTATATTAATTGTCACAATTACTTCAGCATGTTTATTAGGAAATGAA ATTGATAATGTTTTTGTAGAAAAAGAAAGGTTTTTAAATTCTACAAAGAAATATATGTCA TATTATAATACTATGACTGGTATTGAAAATCAAATTAAAGATATTCCATCATGGGTATAT TCAGCAATTGCATTTTGTGAAGCATCATATAGAAAGAATGGACTTGAAAAAGGATATTTA GAAAGTGATGAATATGTAGGATTTGATGAAGAAATTTTTTATTCTACATTAAAAAGACTT TGTCAAGAAAAGAGTAATAAATATTGTAATGTTGTTGAAAATAATGGATCACCAGAATTA TTATATTATTTATATGAATTATTTGGTAATGAATTAGTTAAAGGAATATCTCCAAGAGGA TATGTTTCTGATCTTAGTAAAAATCCAATTAAATTTGATATTACTGGAATTCATTCTGTT TATACTAAATCAAATGTTACAAAATTAATGAAAGATTCAGGATTACCTTTAACATTATCT TTTGGTACATTTAAAAGAAGATATTCAGTACCATGTTCTAATTCATTTGGATATGTATGT CCAAATAATTTACCAAAAGTACCATGTCCATCATCTTTAGGAGGAGATTGTGTTGTACTT ACTTTTAATCCATATTCACAATCAGGTGTTTATGATTATTTAGGTGATTTACATTATAAT AAAAAACATAGTGTTTTAGTAGTTGGATGGAATGATGAAAAAAGAATAGACAGAAGTTGG GGAAATGATTTACATAATTTCTTTGATGGTGGGTATATTGTTAAGAATAGTTTTGGATAC CAACATGGTCACTCATTAAAATATTGGCTTCAACAACATTCTATTAAAGAAGAAATGCAA ATATGTCCTAATGTACGTTCATTTGAACAATGGACTCCATTAGATGAAGATTGTATTAAT AAATATTCATATACTGAATGTTGTAATCAATATATAAAAAGAGGTGTTAAGAAATATATC AATGCAACAATAACTCCTTTAATTTGTGATAGTAGTAAAGATGATAAATATCAAGGAATC TTTAAATGTGATACATCTAGAATTTACTTTATAAAATCAAAGAAACATTCATTTGGACCT TACAAATCATATGGTACACTTGATATTACACCTATTAATGGAATTAATATGTTTACAATT AAATTACTTTCATTTAAGAGAGATATGACTGACAAACAAACAATTACCATTCAACCTACT TGTCCTGAAATGCTTGAAGACATTTTTAAGGCTTCATATACTAAATCAGATGAAGAAGCT ACAACAAATACTGAAGAATGTGGATATGATTTCATTCCATTTAAGGTATTAGAAAAGTAT AATGAGAATTATGTTGTAGATGGATTACATGCACCAGCATTCTCTATTTTTGATATTAAA TGGGATGATCAATCCTATCTCAACTCACATACTCAAGGAATGGATTATTCAGCTATTCAA TCAGCAACAAAGAAAGTATACCAAACTGTCTTTAAAGGACCTTATGATATGAATTAA
  • Download Fasta

  • Fasta :-

    MEQPTKKAVIPFWILWSGLIVLNLFILIVTITSACLLGNEIDNVFVEKERFLNSTKKYMS YYNTMTGIENQIKDIPSWVYSAIAFCEASYRKNGLEKGYLESDEYVGFDEEIFYSTLKRL CQEKSNKYCNVVENNGSPELLYYLYELFGNELVKGISPRGYVSDLSKNPIKFDITGIHSV YTKSNVTKLMKDSGLPLTLSFGTFKRRYSVPCSNSFGYVCPNNLPKVPCPSSLGGDCVVL TFNPYSQSGVYDYLGDLHYNKKHSVLVVGWNDEKRIDRSWGNDLHNFFDGGYIVKNSFGY QHGHSLKYWLQQHSIKEEMQICPNVRSFEQWTPLDEDCINKYSYTECCNQYIKRGVKKYI NATITPLICDSSKDDKYQGIFKCDTSRIYFIKSKKHSFGPYKSYGTLDITPINGINMFTI KLLSFKRDMTDKQTITIQPTCPEMLEDIFKASYTKSDEEATTNTEECGYDFIPFKVLEKY NENYVVDGLHAPAFSIFDIKWDDQSYLNSHTQGMDYSAIQSATKKVYQTVFKGPYDMN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_077850371 SLICDSSKDD0.995unspEDI_077850371 SLICDSSKDD0.995unspEDI_077850371 SLICDSSKDD0.995unspEDI_077850424 SIKLLSFKRD0.991unspEDI_07785060 SKKYMSYYNT0.996unspEDI_077850209 SKRRYSVPCS0.992unsp

EDI_077850      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India