EDI_082600 | cysteine protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_082600SP0.0335590.9658600.000581CS pos: 16-17. SLS-KQ. Pr: 0.5992
No Results

  • Fasta :-

    >EDI_082600 MSVLFITAFLITFSLSKQTTNTNKILKTEFETHWKKWKSDNKRIYNSISEELTRKAIFLS NLKKINELNSQRIDPDDAVFGLNAFSDLKPEEFSRRFNKINLKLLKLKQRNHYKLPVPSG EVPTQYSACLQDMLLDKNSSNEIDLCGGIVIDQGDCGSCYAISNAHELQLKYANLTLTQR GKIEYEMFSPQQLMDCTENSYYCEGGTADEPLMSSHYVVFEKDYPYISYSNTLINNSCVH DKLTPMKVSFSLFDSAQNFEILKRITYYYGSFVTSVKASSDWSYYHSGIYSHSCTKNVVT NHVIEIVGYGNHNGKEYLIARNSWGKNWGIDGFIKISAKSLCGIGGDDGGIYPVSLIQHT DFSDVPKGKYGKKSYKQEVQPKLYNGTDKYDIYEQFPDSSGDSFIDIIISFIVTIPLVVG LISWAICAIVILILSCVFYLNKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_082600.fa Sequence name : EDI_082600 Sequence length : 443 VALUES OF COMPUTED PARAMETERS Coef20 : 4.959 CoefTot : 0.203 ChDiff : -1 ZoneTo : 28 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.376 2.971 0.659 0.955 MesoH : -0.249 0.663 -0.226 0.347 MuHd_075 : 23.139 21.191 8.346 6.118 MuHd_095 : 19.067 15.444 6.187 5.029 MuHd_100 : 26.629 18.462 8.893 6.080 MuHd_105 : 32.296 18.151 10.180 6.325 Hmax_075 : 10.150 13.475 1.418 4.454 Hmax_095 : 10.763 13.475 1.571 4.393 Hmax_100 : 10.100 11.700 1.208 4.050 Hmax_105 : 14.350 11.667 2.296 4.025 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6792 0.3208 DFMC : 0.7899 0.2101
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 443 EDI_082600 MSVLFITAFLITFSLSKQTTNTNKILKTEFETHWKKWKSDNKRIYNSISEELTRKAIFLSNLKKINELNSQRIDPDDAVF 80 GLNAFSDLKPEEFSRRFNKINLKLLKLKQRNHYKLPVPSGEVPTQYSACLQDMLLDKNSSNEIDLCGGIVIDQGDCGSCY 160 AISNAHELQLKYANLTLTQRGKIEYEMFSPQQLMDCTENSYYCEGGTADEPLMSSHYVVFEKDYPYISYSNTLINNSCVH 240 DKLTPMKVSFSLFDSAQNFEILKRITYYYGSFVTSVKASSDWSYYHSGIYSHSCTKNVVTNHVIEIVGYGNHNGKEYLIA 320 RNSWGKNWGIDGFIKISAKSLCGIGGDDGGIYPVSLIQHTDFSDVPKGKYGKKSYKQEVQPKLYNGTDKYDIYEQFPDSS 400 GDSFIDIIISFIVTIPLVVGLISWAICAIVILILSCVFYLNKN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_082600 17 ITFSLSK|QT 0.059 . EDI_082600 24 QTTNTNK|IL 0.068 . EDI_082600 27 NTNKILK|TE 0.057 . EDI_082600 35 EFETHWK|KW 0.056 . EDI_082600 36 FETHWKK|WK 0.102 . EDI_082600 38 THWKKWK|SD 0.094 . EDI_082600 42 KWKSDNK|RI 0.065 . EDI_082600 43 WKSDNKR|IY 0.197 . EDI_082600 54 ISEELTR|KA 0.078 . EDI_082600 55 SEELTRK|AI 0.075 . EDI_082600 63 IFLSNLK|KI 0.053 . EDI_082600 64 FLSNLKK|IN 0.100 . EDI_082600 72 NELNSQR|ID 0.067 . EDI_082600 89 NAFSDLK|PE 0.056 . EDI_082600 95 KPEEFSR|RF 0.084 . EDI_082600 96 PEEFSRR|FN 0.153 . EDI_082600 99 FSRRFNK|IN 0.153 . EDI_082600 103 FNKINLK|LL 0.057 . EDI_082600 106 INLKLLK|LK 0.054 . EDI_082600 108 LKLLKLK|QR 0.061 . EDI_082600 110 LLKLKQR|NH 0.085 . EDI_082600 114 KQRNHYK|LP 0.069 . EDI_082600 137 QDMLLDK|NS 0.065 . EDI_082600 171 AHELQLK|YA 0.069 . EDI_082600 180 NLTLTQR|GK 0.084 . EDI_082600 182 TLTQRGK|IE 0.061 . EDI_082600 222 HYVVFEK|DY 0.067 . EDI_082600 242 NSCVHDK|LT 0.070 . EDI_082600 247 DKLTPMK|VS 0.064 . EDI_082600 263 QNFEILK|RI 0.059 . EDI_082600 264 NFEILKR|IT 0.154 . EDI_082600 277 SFVTSVK|AS 0.064 . EDI_082600 296 YSHSCTK|NV 0.071 . EDI_082600 315 YGNHNGK|EY 0.069 . EDI_082600 321 KEYLIAR|NS 0.093 . EDI_082600 326 ARNSWGK|NW 0.084 . EDI_082600 335 GIDGFIK|IS 0.067 . EDI_082600 339 FIKISAK|SL 0.107 . EDI_082600 367 DFSDVPK|GK 0.078 . EDI_082600 369 SDVPKGK|YG 0.083 . EDI_082600 372 PKGKYGK|KS 0.078 . EDI_082600 373 KGKYGKK|SY 0.149 . EDI_082600 376 YGKKSYK|QE 0.060 . EDI_082600 382 KQEVQPK|LY 0.065 . EDI_082600 389 LYNGTDK|YD 0.070 . EDI_082600 442 CVFYLNK|N- 0.058 . ____________________________^_________________

  • Fasta :-

    >EDI_082600 ATGTCAGTTTTGTTTATCACTGCTTTTCTAATAACATTCTCACTTTCTAAACAAACAACT AACACAAACAAAATTTTAAAAACAGAGTTTGAAACTCATTGGAAAAAATGGAAAAGTGAC AACAAGAGAATATATAATTCTATATCTGAAGAACTAACTCGTAAAGCAATATTTCTTTCA AACCTTAAAAAAATTAATGAATTAAATTCACAAAGAATTGATCCAGATGACGCTGTGTTT GGTTTAAATGCTTTTAGTGATCTAAAACCTGAGGAATTTTCAAGAAGATTTAATAAAATT AACTTAAAGTTACTTAAACTAAAACAAAGAAATCATTACAAACTTCCTGTTCCAAGTGGA GAGGTTCCCACACAATATTCTGCCTGTCTTCAAGACATGTTGTTAGACAAAAACTCTTCA AACGAAATAGATTTATGTGGTGGAATAGTGATTGACCAAGGTGACTGTGGCAGTTGTTAC GCTATTTCGAATGCACATGAACTTCAACTAAAATATGCTAATTTAACTTTAACTCAAAGA GGAAAAATTGAATATGAAATGTTCAGTCCTCAACAACTTATGGACTGTACAGAAAATAGT TATTATTGTGAAGGTGGTACAGCAGATGAACCATTAATGTCTTCCCATTATGTTGTATTT GAAAAGGACTATCCATATATTTCTTATTCAAACACGTTAATTAATAATTCTTGTGTCCAT GATAAACTTACACCAATGAAGGTTTCATTTTCATTATTTGATTCAGCACAGAACTTTGAA ATTTTAAAAAGAATAACATATTATTATGGCTCTTTTGTCACCTCTGTAAAAGCATCATCT GATTGGTCATACTACCACTCTGGAATTTATTCACATAGTTGTACAAAAAATGTTGTCACT AATCATGTTATTGAGATAGTTGGCTACGGTAATCACAATGGAAAAGAATATCTTATTGCT AGAAATTCTTGGGGAAAAAACTGGGGTATTGATGGCTTTATAAAGATTTCTGCCAAATCA CTCTGTGGAATTGGAGGTGATGATGGTGGAATTTATCCAGTATCTCTTATCCAACACACT GACTTTAGTGATGTTCCAAAAGGTAAATACGGAAAAAAGTCATATAAACAAGAAGTTCAG CCGAAGTTATATAATGGAACTGATAAATATGATATTTATGAACAATTTCCTGATTCTTCA GGAGATTCATTCATTGACATTATTATCAGTTTTATAGTTACAATACCATTAGTTGTTGGT TTAATTTCTTGGGCAATTTGTGCAATTGTCATTTTGATATTATCTTGTGTTTTTTATTTG AATAAAAACTAA
  • Download Fasta

  • Fasta :-

    MSVLFITAFLITFSLSKQTTNTNKILKTEFETHWKKWKSDNKRIYNSISEELTRKAIFLS NLKKINELNSQRIDPDDAVFGLNAFSDLKPEEFSRRFNKINLKLLKLKQRNHYKLPVPSG EVPTQYSACLQDMLLDKNSSNEIDLCGGIVIDQGDCGSCYAISNAHELQLKYANLTLTQR GKIEYEMFSPQQLMDCTENSYYCEGGTADEPLMSSHYVVFEKDYPYISYSNTLINNSCVH DKLTPMKVSFSLFDSAQNFEILKRITYYYGSFVTSVKASSDWSYYHSGIYSHSCTKNVVT NHVIEIVGYGNHNGKEYLIARNSWGKNWGIDGFIKISAKSLCGIGGDDGGIYPVSLIQHT DFSDVPKGKYGKKSYKQEVQPKLYNGTDKYDIYEQFPDSSGDSFIDIIISFIVTIPLVVG LISWAICAIVILILSCVFYLNKN

  • title: active site
  • coordinates: Q153,C159,H302,N322
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_082600399 SQFPDSSGDS0.997unspEDI_082600399 SQFPDSSGDS0.997unspEDI_082600399 SQFPDSSGDS0.997unspEDI_082600403 SSSGDSFIDI0.994unspEDI_082600251 SKVSFSLFDS0.991unspEDI_082600374 SYGKKSYKQE0.996unsp

EDI_082600      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India