EDI_091030 | hypothetical protein

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  • Fasta :-

    >EDI_091030 MEKTKLAVPKVSLYNPVELKKVLDLGLEEILKSQLKYDIDYWYSNTIIICSIICSLLGAL AWWYPKPWPESYWHIVSIIVIYIIVDGYLTYIMWFRHKGFAVAIKKPKAIFYSAMIPYTP YFKLTMCKNQKEHNIEIEVNKVFDSDGKLLLPLYQGYVEKLLNFE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_091030.fa Sequence name : EDI_091030 Sequence length : 165 VALUES OF COMPUTED PARAMETERS Coef20 : 3.512 CoefTot : -0.872 ChDiff : 3 ZoneTo : 17 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.182 2.288 0.578 0.815 MesoH : 0.480 0.868 -0.122 0.470 MuHd_075 : 13.042 14.430 4.639 3.821 MuHd_095 : 23.641 6.597 5.906 2.314 MuHd_100 : 10.571 1.338 2.027 0.268 MuHd_105 : 9.062 9.909 2.996 2.164 Hmax_075 : 4.550 8.750 -0.476 3.290 Hmax_095 : 5.400 5.425 -0.932 2.188 Hmax_100 : -1.600 4.500 -2.668 1.890 Hmax_105 : 2.500 6.767 -1.066 2.930 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9418 0.0582 DFMC : 0.9740 0.0260
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 165 EDI_091030 MEKTKLAVPKVSLYNPVELKKVLDLGLEEILKSQLKYDIDYWYSNTIIICSIICSLLGALAWWYPKPWPESYWHIVSIIV 80 IYIIVDGYLTYIMWFRHKGFAVAIKKPKAIFYSAMIPYTPYFKLTMCKNQKEHNIEIEVNKVFDSDGKLLLPLYQGYVEK 160 LLNFE 240 ................................................................................ 80 ................................................................................ 160 ..... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_091030 3 ----MEK|TK 0.060 . EDI_091030 5 --MEKTK|LA 0.069 . EDI_091030 10 TKLAVPK|VS 0.067 . EDI_091030 20 YNPVELK|KV 0.068 . EDI_091030 21 NPVELKK|VL 0.101 . EDI_091030 32 GLEEILK|SQ 0.062 . EDI_091030 36 ILKSQLK|YD 0.064 . EDI_091030 66 LAWWYPK|PW 0.063 . EDI_091030 96 TYIMWFR|HK 0.107 . EDI_091030 98 IMWFRHK|GF 0.068 . EDI_091030 105 GFAVAIK|KP 0.068 . EDI_091030 106 FAVAIKK|PK 0.079 . EDI_091030 108 VAIKKPK|AI 0.078 . EDI_091030 123 PYTPYFK|LT 0.056 . EDI_091030 128 FKLTMCK|NQ 0.057 . EDI_091030 131 TMCKNQK|EH 0.065 . EDI_091030 141 IEIEVNK|VF 0.064 . EDI_091030 148 VFDSDGK|LL 0.054 . EDI_091030 160 YQGYVEK|LL 0.065 . ____________________________^_________________

  • Fasta :-

    >EDI_091030 ATGGAAAAAACCAAGTTAGCTGTTCCAAAAGTTTCATTATATAATCCAGTTGAATTAAAG AAAGTATTGGATTTGGGATTAGAAGAAATTCTTAAATCTCAATTAAAATATGATATTGAT TATTGGTATTCAAATACTATTATTATTTGTTCAATTATTTGTTCTCTTTTAGGGGCACTT GCGTGGTGGTATCCAAAGCCATGGCCTGAATCATATTGGCATATCGTTTCAATAATTGTT ATTTACATTATTGTTGATGGGTATTTAACTTACATTATGTGGTTTAGACATAAAGGTTTT GCTGTTGCAATTAAGAAACCTAAAGCAATATTTTATAGTGCGATGATTCCTTATACTCCA TATTTTAAATTAACAATGTGTAAAAATCAAAAAGAACACAACATTGAAATCGAAGTTAAT AAAGTATTTGATTCTGATGGTAAATTACTTCTTCCTTTATATCAAGGATATGTGGAAAAA TTACTTAATTTTGAATAA
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  • Fasta :-

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IDSitePositionGscoreIscore
EDI_091030T40.5120.020
IDSitePositionGscoreIscore
EDI_091030T40.5120.020
No Results

EDI_091030      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India