• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008236      

  • Computed_GO_Functions:  serine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_096060SP0.0002450.9997480.000007CS pos: 15-16. CYA-KV. Pr: 0.8699
No Results
  • Fasta :-

    >EDI_096060 MRIILLVTFIAFCYAKVLDAETLVKLQKLSLGCHLNGVVYYTSSQWFEEENKTKHSLKKL TLTETEPIDLVPYSEESFSNFVCLNEGVYLLHNGQIAKIENDKIIDITSTPISIDTFKMI SVDGKLRGLASMTVFPEMTLEESAKKFIELEKQNYRVYDQLMIRRWDTYWDGQFQHLFTF KQEEDKSFTFKDIMNDKKYDCPARPFGGNEEYDISPDGTKIAFSILLENPASSLDNNVYY ATFDNPLEWNIITIDNKGYDNQPLFNNDGSLLYYLSMSAPKDESDKSVLKSYDFKEKIIR DITGKIDLSFSAPMKIVGNYMHLSTQIEGNVYIVGLDTSKSELTREDVNIITQKGTAGSF VFTTTGIIYEYNSFTLPQELFIFENKVIKQITHINQEVLSTIKFGEYKEVHYTGANNDQI HAFITYPPNMKTNTKYPVILYTHGGPESPWTNNFHYRWNPQVIAAQGYIVFAPNFHGSGS YGDEFLKAIRKNWGGWPFEDLMKGMDYLKTNEPIVDIDNACAMGASYGGYMMNWINSQNT GRFKCIICHDGIMDSEGSYYYMDEMYFLETEFGYPMYEDNTYYKKYSPLNYVNGYNTPQL TIHGGSDYRIDVVAGYQQFVTLQRKNIESKLVIYPEENHWVLRPYNSIDWHTQVFNWLAK YLPKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_096060.fa Sequence name : EDI_096060 Sequence length : 665 VALUES OF COMPUTED PARAMETERS Coef20 : 4.835 CoefTot : 0.513 ChDiff : -22 ZoneTo : 18 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.059 2.094 0.215 0.673 MesoH : -0.450 0.227 -0.387 0.209 MuHd_075 : 20.711 8.487 6.755 4.508 MuHd_095 : 9.721 8.023 3.092 2.999 MuHd_100 : 19.963 13.374 5.788 5.375 MuHd_105 : 21.735 14.076 6.321 5.571 Hmax_075 : 18.500 21.600 5.436 7.537 Hmax_095 : 16.900 20.213 3.737 6.650 Hmax_100 : 17.400 23.700 5.427 7.460 Hmax_105 : 18.900 27.650 6.782 7.770 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9757 0.0243 DFMC : 0.9810 0.0190
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 665 EDI_096060 MRIILLVTFIAFCYAKVLDAETLVKLQKLSLGCHLNGVVYYTSSQWFEEENKTKHSLKKLTLTETEPIDLVPYSEESFSN 80 FVCLNEGVYLLHNGQIAKIENDKIIDITSTPISIDTFKMISVDGKLRGLASMTVFPEMTLEESAKKFIELEKQNYRVYDQ 160 LMIRRWDTYWDGQFQHLFTFKQEEDKSFTFKDIMNDKKYDCPARPFGGNEEYDISPDGTKIAFSILLENPASSLDNNVYY 240 ATFDNPLEWNIITIDNKGYDNQPLFNNDGSLLYYLSMSAPKDESDKSVLKSYDFKEKIIRDITGKIDLSFSAPMKIVGNY 320 MHLSTQIEGNVYIVGLDTSKSELTREDVNIITQKGTAGSFVFTTTGIIYEYNSFTLPQELFIFENKVIKQITHINQEVLS 400 TIKFGEYKEVHYTGANNDQIHAFITYPPNMKTNTKYPVILYTHGGPESPWTNNFHYRWNPQVIAAQGYIVFAPNFHGSGS 480 YGDEFLKAIRKNWGGWPFEDLMKGMDYLKTNEPIVDIDNACAMGASYGGYMMNWINSQNTGRFKCIICHDGIMDSEGSYY 560 YMDEMYFLETEFGYPMYEDNTYYKKYSPLNYVNGYNTPQLTIHGGSDYRIDVVAGYQQFVTLQRKNIESKLVIYPEENHW 640 VLRPYNSIDWHTQVFNWLAKYLPKK 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ......................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_096060 2 -----MR|II 0.087 . EDI_096060 16 IAFCYAK|VL 0.069 . EDI_096060 25 DAETLVK|LQ 0.056 . EDI_096060 28 TLVKLQK|LS 0.058 . EDI_096060 52 WFEEENK|TK 0.055 . EDI_096060 54 EEENKTK|HS 0.074 . EDI_096060 58 KTKHSLK|KL 0.069 . EDI_096060 59 TKHSLKK|LT 0.127 . EDI_096060 98 HNGQIAK|IE 0.068 . EDI_096060 103 AKIENDK|II 0.062 . EDI_096060 118 ISIDTFK|MI 0.076 . EDI_096060 125 MISVDGK|LR 0.079 . EDI_096060 127 SVDGKLR|GL 0.081 . EDI_096060 145 TLEESAK|KF 0.079 . EDI_096060 146 LEESAKK|FI 0.104 . EDI_096060 152 KFIELEK|QN 0.069 . EDI_096060 156 LEKQNYR|VY 0.082 . EDI_096060 164 YDQLMIR|RW 0.088 . EDI_096060 165 DQLMIRR|WD 0.110 . EDI_096060 181 QHLFTFK|QE 0.071 . EDI_096060 186 FKQEEDK|SF 0.077 . EDI_096060 191 DKSFTFK|DI 0.091 . EDI_096060 197 KDIMNDK|KY 0.057 . EDI_096060 198 DIMNDKK|YD 0.116 . EDI_096060 204 KYDCPAR|PF 0.118 . EDI_096060 220 ISPDGTK|IA 0.065 . EDI_096060 257 IITIDNK|GY 0.062 . EDI_096060 281 LSMSAPK|DE 0.073 . EDI_096060 286 PKDESDK|SV 0.102 . EDI_096060 290 SDKSVLK|SY 0.089 . EDI_096060 295 LKSYDFK|EK 0.070 . EDI_096060 297 SYDFKEK|II 0.074 . EDI_096060 300 FKEKIIR|DI 0.127 . EDI_096060 305 IRDITGK|ID 0.056 . EDI_096060 315 SFSAPMK|IV 0.117 . EDI_096060 340 VGLDTSK|SE 0.062 . EDI_096060 345 SKSELTR|ED 0.110 . EDI_096060 354 VNIITQK|GT 0.071 . EDI_096060 386 LFIFENK|VI 0.066 . EDI_096060 389 FENKVIK|QI 0.078 . EDI_096060 403 EVLSTIK|FG 0.062 . EDI_096060 408 IKFGEYK|EV 0.082 . EDI_096060 431 TYPPNMK|TN 0.058 . EDI_096060 435 NMKTNTK|YP 0.062 . EDI_096060 457 TNNFHYR|WN 0.203 . EDI_096060 487 YGDEFLK|AI 0.062 . EDI_096060 490 EFLKAIR|KN 0.074 . EDI_096060 491 FLKAIRK|NW 0.084 . EDI_096060 503 PFEDLMK|GM 0.060 . EDI_096060 509 KGMDYLK|TN 0.064 . EDI_096060 542 NSQNTGR|FK 0.124 . EDI_096060 544 QNTGRFK|CI 0.067 . EDI_096060 584 EDNTYYK|KY 0.065 . EDI_096060 585 DNTYYKK|YS 0.080 . EDI_096060 609 HGGSDYR|ID 0.078 . EDI_096060 624 QFVTLQR|KN 0.072 . EDI_096060 625 FVTLQRK|NI 0.083 . EDI_096060 630 RKNIESK|LV 0.084 . EDI_096060 643 ENHWVLR|PY 0.106 . EDI_096060 660 VFNWLAK|YL 0.076 . EDI_096060 664 LAKYLPK|K- 0.066 . EDI_096060 665 AKYLPKK|-- 0.111 . ____________________________^_________________
  • Fasta :-

    >EDI_096060 ATGCGAATAATACTGTTAGTAACCTTTATTGCATTTTGTTATGCTAAAGTATTAGATGCA GAGACATTAGTAAAACTTCAAAAGTTATCACTTGGATGTCATCTAAATGGAGTAGTATAT TATACATCAAGCCAATGGTTTGAAGAAGAAAATAAAACAAAGCACTCATTAAAGAAATTA ACATTAACGGAAACTGAGCCAATTGATTTAGTTCCATATAGTGAAGAATCATTTTCTAAT TTTGTATGCCTTAATGAAGGTGTTTATTTACTTCACAATGGACAAATTGCAAAAATAGAG AATGATAAAATTATAGACATTACTTCTACACCTATTTCTATTGACACATTTAAAATGATT TCTGTTGATGGTAAATTAAGAGGACTTGCATCAATGACTGTTTTCCCAGAAATGACTCTT GAAGAATCAGCAAAGAAATTTATTGAATTAGAAAAACAAAATTATAGAGTATATGATCAA TTAATGATAAGAAGATGGGATACTTATTGGGATGGACAATTCCAACATTTATTTACTTTT AAACAAGAAGAAGATAAATCATTTACATTTAAAGATATAATGAATGATAAAAAATATGAT TGTCCTGCACGTCCATTTGGAGGAAATGAAGAATATGATATTAGTCCAGATGGAACAAAA ATTGCATTTTCTATTTTATTAGAGAATCCAGCATCATCATTAGATAATAATGTTTATTAT GCAACATTTGATAATCCATTAGAATGGAATATTATTACAATAGATAATAAAGGATATGAT AATCAACCATTATTTAATAATGATGGAAGTCTTTTATATTATCTTTCAATGTCAGCACCT AAAGATGAAAGTGATAAATCAGTATTAAAATCATATGATTTTAAAGAAAAAATAATTAGA GATATTACTGGTAAGATTGATTTATCATTTAGTGCACCAATGAAAATTGTTGGTAATTAT ATGCATCTTTCTACTCAAATTGAAGGAAATGTATATATTGTAGGATTAGATACATCTAAA AGTGAATTAACTCGTGAAGATGTTAATATTATTACACAAAAAGGTACTGCTGGATCATTT GTTTTTACAACAACAGGAATAATTTATGAATATAATTCATTTACTCTTCCACAAGAATTA TTCATTTTTGAAAATAAAGTCATTAAACAAATTACTCATATTAATCAAGAAGTTCTTTCA ACAATTAAATTTGGAGAATATAAAGAAGTTCATTATACTGGAGCAAATAATGATCAAATT CATGCATTTATTACTTATCCACCAAATATGAAAACAAATACAAAATATCCAGTAATTTTA TATACACATGGAGGACCAGAATCACCATGGACTAATAATTTCCATTATAGATGGAATCCA CAAGTTATAGCAGCACAAGGTTATATTGTTTTTGCACCAAATTTCCATGGATCAGGAAGT TATGGAGATGAATTTTTAAAAGCTATTAGAAAGAATTGGGGAGGATGGCCATTTGAAGAT TTAATGAAAGGAATGGATTATTTAAAAACTAATGAACCAATAGTTGATATAGATAATGCA TGTGCTATGGGAGCAAGTTATGGAGGATATATGATGAATTGGATTAATAGTCAAAATACA GGTAGATTTAAATGTATTATTTGTCATGATGGTATTATGGATTCTGAAGGTAGTTATTAT TATATGGATGAAATGTATTTCCTTGAAACAGAATTTGGATATCCAATGTATGAAGATAAT ACATATTATAAAAAATATAGTCCATTAAATTATGTTAATGGATATAATACTCCTCAATTA ACTATTCATGGAGGTTCAGATTATAGAATTGATGTTGTTGCAGGATATCAACAATTTGTT ACATTACAAAGAAAAAATATTGAAAGTAAATTAGTTATTTATCCTGAAGAAAATCATTGG GTATTAAGACCATATAATTCTATTGATTGGCATACTCAAGTCTTTAATTGGCTTGCCAAA TATCTTCCAAAGAAATAA
  • Download Fasta
  • Fasta :-

    MRIILLVTFIAFCYAKVLDAETLVKLQKLSLGCHLNGVVYYTSSQWFEEENKTKHSLKKL TLTETEPIDLVPYSEESFSNFVCLNEGVYLLHNGQIAKIENDKIIDITSTPISIDTFKMI SVDGKLRGLASMTVFPEMTLEESAKKFIELEKQNYRVYDQLMIRRWDTYWDGQFQHLFTF KQEEDKSFTFKDIMNDKKYDCPARPFGGNEEYDISPDGTKIAFSILLENPASSLDNNVYY ATFDNPLEWNIITIDNKGYDNQPLFNNDGSLLYYLSMSAPKDESDKSVLKSYDFKEKIIR DITGKIDLSFSAPMKIVGNYMHLSTQIEGNVYIVGLDTSKSELTREDVNIITQKGTAGSF VFTTTGIIYEYNSFTLPQELFIFENKVIKQITHINQEVLSTIKFGEYKEVHYTGANNDQI HAFITYPPNMKTNTKYPVILYTHGGPESPWTNNFHYRWNPQVIAAQGYIVFAPNFHGSGS YGDEFLKAIRKNWGGWPFEDLMKGMDYLKTNEPIVDIDNACAMGASYGGYMMNWINSQNT GRFKCIICHDGIMDSEGSYYYMDEMYFLETEFGYPMYEDNTYYKKYSPLNYVNGYNTPQL TIHGGSDYRIDVVAGYQQFVTLQRKNIESKLVIYPEENHWVLRPYNSIDWHTQVFNWLAK YLPKK

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EDI_096060480 SHGSGSYGDE0.994unsp

EDI_096060      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India