EDI_113090 | cysteine proteinase 3 precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_113090SP0.0010960.9988340.000070CS pos: 15-16. SNA-IS. Pr: 0.6917
No Results

  • Fasta :-

    >EDI_113090 MFGLLFVTLISLSNAISFDSWMAKNNQKFKGVELLRRRAIFNMNSKFVAKFNQQHNFQLS VDGPYAAMTNTEYNALLKARSVNDADTPIRKSVKRDIPKAIDWRAEGKVTPIRDQAQCGS CYSFGSLAAIESRLLIGGSQTYTADNLDLSEQQIVDCSDRNNGCNGGSILYVYAYTKRNG VMQEKDYPYTATNGTCQYDTNKIVVKNAGQVIVQQRNETALVEAIAEGPVAVAIDAGQIS FQLYKSGVYDEPKCKKFILNHAVCAVGYGSQDGKDYYIVRNSWGTTWGMDGYILMSRNKN NQCGIANDAIYPTGVTEVKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_113090.fa Sequence name : EDI_113090 Sequence length : 320 VALUES OF COMPUTED PARAMETERS Coef20 : 4.605 CoefTot : -0.838 ChDiff : 6 ZoneTo : 61 KR : 8 DE : 2 CleavSite : 38 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.876 1.859 0.261 0.684 MesoH : -0.833 0.177 -0.390 0.189 MuHd_075 : 33.281 20.548 8.974 7.665 MuHd_095 : 35.507 22.969 9.842 8.617 MuHd_100 : 27.759 16.925 6.443 7.084 MuHd_105 : 25.332 18.329 6.650 5.825 Hmax_075 : 10.000 16.400 -0.099 5.160 Hmax_095 : 13.300 14.500 0.961 4.357 Hmax_100 : 9.000 10.400 -1.204 4.920 Hmax_105 : 0.800 6.100 -0.553 4.470 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4437 0.5563 DFMC : 0.3569 0.6431 This protein is probably imported in mitochondria. f(Ser) = 0.0984 f(Arg) = 0.0492 CMi = 0.70838 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 320 EDI_113090 MFGLLFVTLISLSNAISFDSWMAKNNQKFKGVELLRRRAIFNMNSKFVAKFNQQHNFQLSVDGPYAAMTNTEYNALLKAR 80 SVNDADTPIRKSVKRDIPKAIDWRAEGKVTPIRDQAQCGSCYSFGSLAAIESRLLIGGSQTYTADNLDLSEQQIVDCSDR 160 NNGCNGGSILYVYAYTKRNGVMQEKDYPYTATNGTCQYDTNKIVVKNAGQVIVQQRNETALVEAIAEGPVAVAIDAGQIS 240 FQLYKSGVYDEPKCKKFILNHAVCAVGYGSQDGKDYYIVRNSWGTTWGMDGYILMSRNKNNQCGIANDAIYPTGVTEVKK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_113090 24 FDSWMAK|NN 0.076 . EDI_113090 28 MAKNNQK|FK 0.079 . EDI_113090 30 KNNQKFK|GV 0.113 . EDI_113090 36 KGVELLR|RR 0.067 . EDI_113090 37 GVELLRR|RA 0.116 . EDI_113090 38 VELLRRR|AI 0.105 . EDI_113090 46 IFNMNSK|FV 0.086 . EDI_113090 50 NSKFVAK|FN 0.095 . EDI_113090 78 EYNALLK|AR 0.061 . EDI_113090 80 NALLKAR|SV 0.260 . EDI_113090 90 DADTPIR|KS 0.064 . EDI_113090 91 ADTPIRK|SV 0.125 . EDI_113090 94 PIRKSVK|RD 0.063 . EDI_113090 95 IRKSVKR|DI 0.450 . EDI_113090 99 VKRDIPK|AI 0.074 . EDI_113090 104 PKAIDWR|AE 0.120 . EDI_113090 108 DWRAEGK|VT 0.061 . EDI_113090 113 GKVTPIR|DQ 0.114 . EDI_113090 133 LAAIESR|LL 0.096 . EDI_113090 160 IVDCSDR|NN 0.099 . EDI_113090 177 YVYAYTK|RN 0.061 . EDI_113090 178 VYAYTKR|NG 0.163 . EDI_113090 185 NGVMQEK|DY 0.063 . EDI_113090 202 CQYDTNK|IV 0.072 . EDI_113090 206 TNKIVVK|NA 0.121 . EDI_113090 216 QVIVQQR|NE 0.093 . EDI_113090 245 ISFQLYK|SG 0.070 . EDI_113090 253 GVYDEPK|CK 0.068 . EDI_113090 255 YDEPKCK|KF 0.057 . EDI_113090 256 DEPKCKK|FI 0.093 . EDI_113090 274 YGSQDGK|DY 0.092 . EDI_113090 280 KDYYIVR|NS 0.088 . EDI_113090 297 GYILMSR|NK 0.070 . EDI_113090 299 ILMSRNK|NN 0.062 . EDI_113090 319 TGVTEVK|K- 0.063 . EDI_113090 320 GVTEVKK|-- 0.103 . ____________________________^_________________

  • Fasta :-

    >EDI_113090 ATGTTCGGTTTACTCTTTGTTACTCTTATTTCTTTGAGCAATGCCATTAGTTTTGATAGT TGGATGGCTAAAAATAACCAAAAATTCAAAGGAGTTGAATTATTAAGAAGAAGAGCTATC TTTAATATGAACTCTAAATTTGTTGCTAAGTTTAACCAACAACATAACTTCCAATTATCT GTTGATGGACCATATGCCGCTATGACTAATACTGAATACAATGCCTTATTAAAAGCTAGA AGCGTTAATGATGCTGACACACCAATCAGAAAGTCTGTTAAAAGAGATATTCCAAAGGCT ATTGATTGGAGAGCTGAAGGAAAAGTTACTCCAATTAGAGATCAAGCCCAATGTGGTTCA TGTTATTCATTTGGATCACTTGCTGCTATTGAATCAAGATTATTGATTGGTGGTTCTCAA ACTTATACTGCTGATAATCTTGACCTTTCTGAACAACAAATAGTTGATTGTAGTGACAGA AATAATGGATGTAATGGTGGTTCTATTTTATATGTCTACGCTTACACTAAGAGAAATGGA GTAATGCAAGAAAAAGACTATCCATATACTGCAACAAATGGAACTTGTCAATATGATACT AATAAAATTGTTGTTAAGAACGCTGGACAAGTTATTGTTCAACAAAGAAATGAAACTGCA TTAGTAGAAGCTATTGCTGAAGGACCAGTTGCTGTTGCTATTGATGCAGGTCAAATTTCT TTCCAATTATATAAATCAGGAGTTTATGATGAACCAAAATGTAAAAAGTTTATTCTTAAT CATGCTGTTTGTGCTGTTGGATATGGATCTCAAGATGGTAAAGATTATTATATTGTAAGA AATTCATGGGGAACTACATGGGGAATGGATGGTTATATTTTAATGTCAAGAAATAAGAAT AATCAATGTGGTATTGCTAATGATGCAATTTATCCAACTGGTGTTACAGAAGTGAAGAAA TAA
  • Download Fasta

  • Fasta :-

    MFGLLFVTLISLSNAISFDSWMAKNNQKFKGVELLRRRAIFNMNSKFVAKFNQQHNFQLS VDGPYAAMTNTEYNALLKARSVNDADTPIRKSVKRDIPKAIDWRAEGKVTPIRDQAQCGS CYSFGSLAAIESRLLIGGSQTYTADNLDLSEQQIVDCSDRNNGCNGGSILYVYAYTKRNG VMQEKDYPYTATNGTCQYDTNKIVVKNAGQVIVQQRNETALVEAIAEGPVAVAIDAGQIS FQLYKSGVYDEPKCKKFILNHAVCAVGYGSQDGKDYYIVRNSWGTTWGMDGYILMSRNKN NQCGIANDAIYPTGVTEVKK

  • title: active site
  • coordinates: Q115,C121,H261,N281
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_11309081 SLKARSVNDA0.993unspEDI_11309092 SPIRKSVKRD0.998unsp

EDI_113090      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India