EDI_114910 | hypothetical protein

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No Results
No Results

  • Fasta :-

    >EDI_114910 MENTTLVSLYNEEQKENNQTTIRIDGSSSSSSEESFQGFSFSTILLPHHSNEKEDGFVDI DGYLTPFENETNIFKQILYCVFPCLIPPFISNKRIEKYIRATMSISFIFTLLLIGVFIGE LCICGIT
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_114910.fa Sequence name : EDI_114910 Sequence length : 127 VALUES OF COMPUTED PARAMETERS Coef20 : 3.179 CoefTot : 0.000 ChDiff : -8 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.500 2.547 0.550 0.892 MesoH : -0.128 0.769 -0.171 0.344 MuHd_075 : 22.231 9.381 5.949 2.254 MuHd_095 : 5.007 5.027 2.018 2.133 MuHd_100 : 5.990 4.003 0.536 1.815 MuHd_105 : 11.577 4.319 1.839 2.036 Hmax_075 : -5.133 -4.317 -4.353 -0.385 Hmax_095 : -7.200 -2.625 -4.410 0.691 Hmax_100 : -10.600 -6.300 -6.317 -0.540 Hmax_105 : -5.900 -4.200 -5.135 0.187 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9951 0.0049 DFMC : 0.9894 0.0106
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 127 EDI_114910 MENTTLVSLYNEEQKENNQTTIRIDGSSSSSSEESFQGFSFSTILLPHHSNEKEDGFVDIDGYLTPFENETNIFKQILYC 80 VFPCLIPPFISNKRIEKYIRATMSISFIFTLLLIGVFIGELCICGIT 160 ................................................................................ 80 ............................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_114910 15 LYNEEQK|EN 0.063 . EDI_114910 23 NNQTTIR|ID 0.091 . EDI_114910 53 PHHSNEK|ED 0.065 . EDI_114910 75 NETNIFK|QI 0.057 . EDI_114910 93 PPFISNK|RI 0.076 . EDI_114910 94 PFISNKR|IE 0.139 . EDI_114910 97 SNKRIEK|YI 0.162 . EDI_114910 100 RIEKYIR|AT 0.100 . ____________________________^_________________

  • Fasta :-

    >EDI_114910 ATGGAAAATACCACACTTGTCTCTCTTTATAATGAAGAACAAAAAGAAAATAATCAAACA ACAATTAGAATAGATGGAAGTTCATCTTCTTCAAGTGAAGAAAGTTTTCAAGGATTTAGT TTTAGTACAATACTTCTTCCACATCATTCAAATGAAAAAGAAGATGGATTTGTTGATATT GATGGATATTTAACTCCATTTGAGAATGAAACAAATATTTTTAAACAAATATTGTATTGT GTATTTCCATGTTTAATACCACCATTTATTTCTAATAAAAGAATAGAAAAATATATAAGA GCAACAATGTCTATATCATTTATTTTTACATTATTATTGATTGGAGTATTTATTGGAGAA TTATGTATATGTGGAATTACAT
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  • Fasta :-

    No Results
    No Results
IDSitePositionGscoreIscore
EDI_114910T200.5150.022
IDSitePositionGscoreIscore
EDI_114910T200.5150.022
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_11491032 SSSSSSEESF0.993unspEDI_11491032 SSSSSSEESF0.993unspEDI_11491032 SSSSSSEESF0.993unspEDI_11491030 SGSSSSSSEE0.992unspEDI_11491031 SSSSSSSEES0.998unsp

EDI_114910      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India