EDI_146070 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
EDI_146070OTHER0.9773070.0224860.000207
No Results

  • Fasta :-

    >EDI_146070 METGLLGHAEQKAPTSLQKCILGLVALLIIFQAFVLIFIFTSGYVTLDNYQLSAQNIMDK AVQDVDEGLTQPTLPKSFVTPYQLPRYCQYNRGTCWALATIGLLEQSYRDNGIRKGFLKD NEYLRLSPQAYAIDVLNQCALHPEACPGKEGINNSTEGGYVEWLYAFTDLYDKVLPESAC PYAEENEGQWECADKEKKQASNPIKFNVTSITTKRNIYDVKKLLVDTNKPVAFDSSLIIG QYAIPTAGHEMLRAFVKNVDNCPNSNNEECMYLEQHEMNPDGEFFIEDIKAASEGGHAMN IVGYNDHFVNKDGTKGAFIVRNSWLEAVYDYDANQWIFPEEDQRKKFNIKSNKLPPPTPR NYYRGSHSSKYIMQEISEWDERILCPNPNNIQNWDSCVNLAVGPTKQGIRQNIPDSSACF NHTFMMEYAKNYRRPMEFRCLNQFTNELCSEEDLDGSRFFLTHKSQSIHNPNLVNFCMLR VNKTDITQQKEFCANDVPFDYVEFLFMPTREYMDLLQNNEDYCGFHIWPYSYIERNQKYR GFFDVIHFDITWDDRSYVANQEKGFDYQYIHSSTKSQSDFPEFIGPEPYQKRFTE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_146070.fa Sequence name : EDI_146070 Sequence length : 595 VALUES OF COMPUTED PARAMETERS Coef20 : 3.233 CoefTot : 0.000 ChDiff : -23 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.512 3.112 0.530 1.023 MesoH : -0.048 0.618 -0.239 0.322 MuHd_075 : 12.192 7.299 4.312 2.342 MuHd_095 : 10.408 18.059 3.184 4.004 MuHd_100 : 3.411 14.952 3.278 3.009 MuHd_105 : 9.578 11.812 5.155 2.812 Hmax_075 : 3.150 4.317 -1.106 2.532 Hmax_095 : 6.475 11.025 -0.019 3.728 Hmax_100 : 4.000 10.700 -0.158 3.620 Hmax_105 : 2.400 6.200 -0.864 2.928 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9933 0.0067 DFMC : 0.9965 0.0035
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 595 EDI_146070 METGLLGHAEQKAPTSLQKCILGLVALLIIFQAFVLIFIFTSGYVTLDNYQLSAQNIMDKAVQDVDEGLTQPTLPKSFVT 80 PYQLPRYCQYNRGTCWALATIGLLEQSYRDNGIRKGFLKDNEYLRLSPQAYAIDVLNQCALHPEACPGKEGINNSTEGGY 160 VEWLYAFTDLYDKVLPESACPYAEENEGQWECADKEKKQASNPIKFNVTSITTKRNIYDVKKLLVDTNKPVAFDSSLIIG 240 QYAIPTAGHEMLRAFVKNVDNCPNSNNEECMYLEQHEMNPDGEFFIEDIKAASEGGHAMNIVGYNDHFVNKDGTKGAFIV 320 RNSWLEAVYDYDANQWIFPEEDQRKKFNIKSNKLPPPTPRNYYRGSHSSKYIMQEISEWDERILCPNPNNIQNWDSCVNL 400 AVGPTKQGIRQNIPDSSACFNHTFMMEYAKNYRRPMEFRCLNQFTNELCSEEDLDGSRFFLTHKSQSIHNPNLVNFCMLR 480 VNKTDITQQKEFCANDVPFDYVEFLFMPTREYMDLLQNNEDYCGFHIWPYSYIERNQKYRGFFDVIHFDITWDDRSYVAN 560 QEKGFDYQYIHSSTKSQSDFPEFIGPEPYQKRFTE 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_146070 12 LGHAEQK|AP 0.066 . EDI_146070 19 APTSLQK|CI 0.060 . EDI_146070 60 AQNIMDK|AV 0.095 . EDI_146070 76 TQPTLPK|SF 0.067 . EDI_146070 86 TPYQLPR|YC 0.113 . EDI_146070 92 RYCQYNR|GT 0.122 . EDI_146070 109 LLEQSYR|DN 0.122 . EDI_146070 114 YRDNGIR|KG 0.076 . EDI_146070 115 RDNGIRK|GF 0.087 . EDI_146070 119 IRKGFLK|DN 0.091 . EDI_146070 125 KDNEYLR|LS 0.081 . EDI_146070 149 PEACPGK|EG 0.059 . EDI_146070 173 FTDLYDK|VL 0.050 . EDI_146070 195 QWECADK|EK 0.064 . EDI_146070 197 ECADKEK|KQ 0.061 . EDI_146070 198 CADKEKK|QA 0.110 . EDI_146070 205 QASNPIK|FN 0.099 . EDI_146070 214 VTSITTK|RN 0.062 . EDI_146070 215 TSITTKR|NI 0.240 . EDI_146070 221 RNIYDVK|KL 0.061 . EDI_146070 222 NIYDVKK|LL 0.086 . EDI_146070 229 LLVDTNK|PV 0.064 . EDI_146070 253 AGHEMLR|AF 0.087 . EDI_146070 257 MLRAFVK|NV 0.094 . EDI_146070 290 FFIEDIK|AA 0.074 . EDI_146070 311 NDHFVNK|DG 0.088 . EDI_146070 315 VNKDGTK|GA 0.085 . EDI_146070 321 KGAFIVR|NS 0.073 . EDI_146070 344 FPEEDQR|KK 0.077 . EDI_146070 345 PEEDQRK|KF 0.075 . EDI_146070 346 EEDQRKK|FN 0.099 . EDI_146070 350 RKKFNIK|SN 0.078 . EDI_146070 353 FNIKSNK|LP 0.059 . EDI_146070 360 LPPPTPR|NY 0.109 . EDI_146070 364 TPRNYYR|GS 0.162 . EDI_146070 370 RGSHSSK|YI 0.123 . EDI_146070 382 ISEWDER|IL 0.092 . EDI_146070 406 LAVGPTK|QG 0.062 . EDI_146070 410 PTKQGIR|QN 0.073 . EDI_146070 430 FMMEYAK|NY 0.059 . EDI_146070 433 EYAKNYR|RP 0.069 . EDI_146070 434 YAKNYRR|PM 0.095 . EDI_146070 439 RRPMEFR|CL 0.119 . EDI_146070 458 EDLDGSR|FF 0.073 . EDI_146070 464 RFFLTHK|SQ 0.078 . EDI_146070 480 VNFCMLR|VN 0.076 . EDI_146070 483 CMLRVNK|TD 0.126 . EDI_146070 490 TDITQQK|EF 0.072 . EDI_146070 510 FLFMPTR|EY 0.087 . EDI_146070 535 PYSYIER|NQ 0.075 . EDI_146070 538 YIERNQK|YR 0.112 . EDI_146070 540 ERNQKYR|GF 0.194 . EDI_146070 555 DITWDDR|SY 0.098 . EDI_146070 563 YVANQEK|GF 0.073 . EDI_146070 575 YIHSSTK|SQ 0.088 . EDI_146070 591 GPEPYQK|RF 0.062 . EDI_146070 592 PEPYQKR|FT 0.260 . ____________________________^_________________

  • Fasta :-

    >EDI_146070 ATGGAAACTGGTCTTCTTGGACATGCTGAACAAAAAGCACCAACCTCATTACAAAAATGT ATATTGGGGTTAGTTGCATTGTTAATTATTTTCCAAGCATTTGTACTTATTTTTATATTT ACTTCAGGATATGTTACACTTGATAATTATCAACTATCTGCACAAAACATAATGGATAAA GCCGTTCAAGATGTCGATGAGGGATTAACACAACCTACATTACCAAAATCATTTGTTACA CCTTATCAACTCCCACGATATTGTCAATATAATAGAGGAACATGTTGGGCATTAGCTACT ATTGGTCTTTTGGAACAATCATATAGAGATAATGGTATTAGAAAAGGATTCCTTAAAGAT AACGAATATCTTAGATTATCACCTCAAGCATATGCTATTGATGTCTTAAATCAATGTGCC CTTCATCCAGAAGCTTGTCCAGGTAAAGAAGGAATTAATAATTCTACAGAAGGAGGATAT GTAGAATGGTTATATGCATTCACTGATTTATATGATAAAGTTCTTCCAGAAAGTGCTTGT CCATATGCAGAAGAAAATGAAGGACAATGGGAATGTGCTGACAAAGAAAAGAAACAAGCA AGCAATCCAATAAAATTCAATGTTACTAGTATAACTACTAAGAGAAATATTTATGATGTT AAAAAATTATTAGTTGATACAAATAAACCTGTTGCATTTGACTCATCATTAATTATTGGA CAATATGCTATCCCAACTGCTGGACATGAAATGTTAAGAGCATTTGTAAAGAATGTAGAT AATTGTCCAAATAGTAATAATGAAGAATGTATGTACCTTGAACAACATGAAATGAATCCA GATGGAGAGTTCTTCATTGAAGATATTAAAGCTGCTAGTGAAGGAGGACATGCAATGAAT ATTGTTGGATATAATGATCATTTTGTTAATAAAGATGGAACTAAAGGAGCATTTATTGTA AGAAATTCATGGTTAGAAGCTGTTTATGATTATGATGCTAATCAATGGATTTTCCCAGAA GAAGATCAAAGAAAGAAATTTAATATTAAATCAAATAAACTTCCACCACCAACACCTAGA AATTATTATAGAGGATCTCATTCATCAAAATATATAATGCAAGAAATTTCAGAATGGGAT GAACGTATTTTATGTCCAAATCCCAATAATATTCAAAATTGGGATTCATGTGTTAATTTG GCTGTTGGACCTACTAAACAAGGAATTAGACAAAATATTCCAGACTCATCAGCATGTTTC AATCATACTTTTATGATGGAATATGCTAAGAATTATCGTAGACCAATGGAATTTAGATGT TTAAATCAATTTACAAATGAATTATGTAGTGAAGAAGATTTAGATGGATCAAGATTCTTC TTGACACATAAATCACAATCTATTCATAATCCTAATTTGGTTAATTTCTGTATGTTAAGA GTAAACAAAACTGATATCACTCAACAAAAGGAATTTTGTGCTAATGACGTTCCATTTGAT TATGTTGAATTCTTGTTTATGCCAACACGAGAGTATATGGATTTATTACAAAATAATGAA GATTATTGTGGATTCCATATTTGGCCTTATAGCTATATTGAAAGAAATCAAAAATACAGA GGATTCTTTGATGTAATTCATTTTGACATCACTTGGGATGATCGTTCTTATGTAGCTAAT CAAGAAAAAGGATTTGATTATCAATACATTCATTCATCTACAAAGAGCCAATCTGATTTC CCTGAATTCATCGGACCAGAACCTTATCAAAAGAGATTCACTGAATGA
  • Download Fasta

  • Fasta :-

    METGLLGHAEQKAPTSLQKCILGLVALLIIFQAFVLIFIFTSGYVTLDNYQLSAQNIMDK AVQDVDEGLTQPTLPKSFVTPYQLPRYCQYNRGTCWALATIGLLEQSYRDNGIRKGFLKD NEYLRLSPQAYAIDVLNQCALHPEACPGKEGINNSTEGGYVEWLYAFTDLYDKVLPESAC PYAEENEGQWECADKEKKQASNPIKFNVTSITTKRNIYDVKKLLVDTNKPVAFDSSLIIG QYAIPTAGHEMLRAFVKNVDNCPNSNNEECMYLEQHEMNPDGEFFIEDIKAASEGGHAMN IVGYNDHFVNKDGTKGAFIVRNSWLEAVYDYDANQWIFPEEDQRKKFNIKSNKLPPPTPR NYYRGSHSSKYIMQEISEWDERILCPNPNNIQNWDSCVNLAVGPTKQGIRQNIPDSSACF NHTFMMEYAKNYRRPMEFRCLNQFTNELCSEEDLDGSRFFLTHKSQSIHNPNLVNFCMLR VNKTDITQQKEFCANDVPFDYVEFLFMPTREYMDLLQNNEDYCGFHIWPYSYIERNQKYR GFFDVIHFDITWDDRSYVANQEKGFDYQYIHSSTKSQSDFPEFIGPEPYQKRFTE

  • title: active site
  • coordinates: Q89,C95,H297,N322
IDSitePositionGscoreIscore
EDI_146070T5940.5250.056
IDSitePositionGscoreIscore
EDI_146070T5940.5250.056
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_146070576 SSSTKSQSDF0.993unspEDI_146070576 SSSTKSQSDF0.993unspEDI_146070576 SSSTKSQSDF0.993unspEDI_146070323 SIVRNSWLEA0.995unspEDI_146070450 SNELCSEEDL0.997unsp

EDI_146070      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India