EDI_149140 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_149140OTHER0.9999930.0000050.000002
No Results

  • Fasta :-

    >EDI_149140 MENTTLVSLYNEEQKENNQTTIRIDGSSSSSSEESFQGFSFSTILLPHHSNEKEDGFVDI DGYLTPFENETNIFKQILYCVFPCLIPPFISNKRIEKYIRATMSISFIFTLLLIGVFIGE LCICGITSFSINPGIGPSADKIVDFGAKYSYDITQNYQIYRLFTSLFLSPSLFGLVVEII FTLRFFLYFEHRWGIILFFVTYIISGEAGVLLSCVLSCNNIAVCSMGPFAGLISVFLVDL ALTNQNYKVYFKRAVFTSLIGLLVIVFTQLFPLQDFTCLLGSVIVGLSLGVLYFINLNQW FSQQSLLLQTIIYVSLVTFLLTYFIIFYLLLFIWIQPLQITISTQTN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_149140.fa Sequence name : EDI_149140 Sequence length : 347 VALUES OF COMPUTED PARAMETERS Coef20 : 3.179 CoefTot : 0.000 ChDiff : -8 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.524 2.588 0.550 1.011 MesoH : 1.419 1.605 0.141 0.638 MuHd_075 : 22.231 9.381 5.949 2.254 MuHd_095 : 5.007 5.027 2.018 2.133 MuHd_100 : 5.990 4.003 0.536 1.815 MuHd_105 : 11.577 4.319 1.839 2.036 Hmax_075 : -5.133 -4.317 -4.353 -0.385 Hmax_095 : -7.200 -2.625 -4.410 0.691 Hmax_100 : -10.600 -6.300 -6.317 -0.540 Hmax_105 : -5.900 -4.200 -5.135 0.187 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9621 0.0379 DFMC : 0.9491 0.0509
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 347 EDI_149140 MENTTLVSLYNEEQKENNQTTIRIDGSSSSSSEESFQGFSFSTILLPHHSNEKEDGFVDIDGYLTPFENETNIFKQILYC 80 VFPCLIPPFISNKRIEKYIRATMSISFIFTLLLIGVFIGELCICGITSFSINPGIGPSADKIVDFGAKYSYDITQNYQIY 160 RLFTSLFLSPSLFGLVVEIIFTLRFFLYFEHRWGIILFFVTYIISGEAGVLLSCVLSCNNIAVCSMGPFAGLISVFLVDL 240 ALTNQNYKVYFKRAVFTSLIGLLVIVFTQLFPLQDFTCLLGSVIVGLSLGVLYFINLNQWFSQQSLLLQTIIYVSLVTFL 320 LTYFIIFYLLLFIWIQPLQITISTQTN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_149140 15 LYNEEQK|EN 0.063 . EDI_149140 23 NNQTTIR|ID 0.091 . EDI_149140 53 PHHSNEK|ED 0.065 . EDI_149140 75 NETNIFK|QI 0.057 . EDI_149140 93 PPFISNK|RI 0.076 . EDI_149140 94 PFISNKR|IE 0.139 . EDI_149140 97 SNKRIEK|YI 0.162 . EDI_149140 100 RIEKYIR|AT 0.100 . EDI_149140 141 IGPSADK|IV 0.073 . EDI_149140 148 IVDFGAK|YS 0.069 . EDI_149140 161 QNYQIYR|LF 0.082 . EDI_149140 184 EIIFTLR|FF 0.080 . EDI_149140 192 FLYFEHR|WG 0.084 . EDI_149140 248 LTNQNYK|VY 0.058 . EDI_149140 252 NYKVYFK|RA 0.054 . EDI_149140 253 YKVYFKR|AV 0.449 . ____________________________^_________________

  • Fasta :-

    >EDI_149140 ATGGAAAATACCACACTTGTCTCTCTTTATAATGAAGAACAAAAAGAAAATAATCAAACA ACAATTAGAATAGATGGAAGTTCATCTTCTTCAAGTGAAGAAAGTTTTCAAGGATTTAGT TTTAGTACAATACTTCTTCCACATCATTCAAATGAAAAAGAAGATGGATTTGTTGATATT GATGGATATTTAACTCCATTTGAGAATGAAACAAATATTTTTAAACAAATATTGTATTGT GTATTTCCATGTTTAATACCACCATTTATTTCTAATAAAAGAATAGAAAAATATATAAGA GCAACAATGTCTATATCATTTATTTTTACATTATTATTGATTGGAGTATTTATTGGAGAA TTATGTATATGTGGAATTACATCATTTTCAATAAATCCAGGGATAGGTCCAAGTGCAGAT AAAATAGTAGATTTTGGAGCAAAATATTCATATGATATAACTCAAAATTATCAAATATAT CGACTTTTTACATCATTATTTCTAAGTCCATCATTATTTGGATTAGTTGTTGAAATTATA TTTACATTAAGATTTTTCTTATATTTTGAACATAGATGGGGAATAATATTATTTTTTGTT ACATATATTATTAGTGGAGAGGCAGGAGTATTATTAAGTTGTGTATTAAGTTGTAATAAT ATTGCAGTATGTTCTATGGGACCATTTGCTGGATTAATATCAGTATTTCTTGTTGATTTA GCATTAACAAATCAAAATTATAAAGTATATTTTAAAAGAGCTGTTTTTACATCATTAATA GGTCTTTTAGTGATAGTATTTACACAATTATTTCCATTACAAGATTTTACATGTTTATTA GGAAGTGTTATTGTTGGATTAAGTCTAGGAGTATTATATTTTATTAATTTGAATCAATGG TTTTCTCAACAATCATTATTATTACAAACAATTATTTATGTTTCATTAGTAACATTTCTC TTAACATATTTTATTATTTTTTATTTATTATTATTCATATGGATTCAACCTTTACAAATT ACAATATCAACTCAAACAAATTGA
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  • Fasta :-

    MENTTLVSLYNEEQKENNQTTIRIDGSSSSSSEESFQGFSFSTILLPHHSNEKEDGFVDI DGYLTPFENETNIFKQILYCVFPCLIPPFISNKRIEKYIRATMSISFIFTLLLIGVFIGE LCICGITSFSINPGIGPSADKIVDFGAKYSYDITQNYQIYRLFTSLFLSPSLFGLVVEII FTLRFFLYFEHRWGIILFFVTYIISGEAGVLLSCVLSCNNIAVCSMGPFAGLISVFLVDL ALTNQNYKVYFKRAVFTSLIGLLVIVFTQLFPLQDFTCLLGSVIVGLSLGVLYFINLNQW FSQQSLLLQTIIYVSLVTFLLTYFIIFYLLLFIWIQPLQITISTQTN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_14914032 SSSSSSEESF0.993unspEDI_14914032 SSSSSSEESF0.993unspEDI_14914032 SSSSSSEESF0.993unspEDI_14914030 SGSSSSSSEE0.992unspEDI_14914031 SSSSSSSEES0.998unsp

EDI_149140      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India