EDI_155340 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004177      GO:0008270      

  • Computed_GO_Functions:  aminopeptidase activity      zinc ion binding      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_155340OTHER0.9995160.0001790.000306
No Results

  • Fasta :-

    >EDI_155340 MKFTDKVKKKKKNKKRKILKLCIMSSSAKDFINFLNEASGSPFVACQTVQKRLESAGYVH LKENEVWNLELHKKYYLVRDDSSLIAFRTNSANATSRIFITSSHLDSPFLKLKPYPDLIK NNLALVSCEVYGGGIWHTWIDRDLGISGRVILTNGERRIVSIKEPLFRICGLAIHLDTER KYIIDKDKHLSAVCSEAASKKISAYDLLLNKIAIQLKVDVKDIISTDLCLCDCEPASLLS LNKYIVGQGIDNLNGVFTSLQGFFSSEQHNQNSQQIDMFVAFDNEEIGSTNRRGAQSVFL TNTINRIHSILFNNESIQSIYVAYAKSVVLSIDGAHASHPTVDVMEKNHPIRLNSGPVLK EHCGQKYMSDGLLRAMVVKAAGDIPTQTFVLKQSIIGGSTIGPHVASTTGMTTIDLGNPM LSMHSIREMCGAFDVDYMIQLIERSYTSFPDITF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_155340.fa Sequence name : EDI_155340 Sequence length : 454 VALUES OF COMPUTED PARAMETERS Coef20 : 3.728 CoefTot : -0.872 ChDiff : 7 ZoneTo : 29 KR : 13 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.324 1.194 0.135 0.527 MesoH : -0.011 0.485 -0.245 0.263 MuHd_075 : 32.314 19.549 9.977 7.868 MuHd_095 : 37.643 24.246 11.132 8.222 MuHd_100 : 35.205 23.468 10.992 7.493 MuHd_105 : 31.385 17.080 7.828 6.296 Hmax_075 : -17.850 14.700 -1.581 4.270 Hmax_095 : -11.375 2.538 -4.867 0.219 Hmax_100 : -15.900 3.300 -4.867 -0.610 Hmax_105 : -16.100 -1.800 -7.243 -1.410 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3791 0.6209 DFMC : 0.2274 0.7726 This protein is probably imported in mitochondria. f(Ser) = 0.1034 f(Arg) = 0.0345 CMi = 0.87464 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 454 EDI_155340 MKFTDKVKKKKKNKKRKILKLCIMSSSAKDFINFLNEASGSPFVACQTVQKRLESAGYVHLKENEVWNLELHKKYYLVRD 80 DSSLIAFRTNSANATSRIFITSSHLDSPFLKLKPYPDLIKNNLALVSCEVYGGGIWHTWIDRDLGISGRVILTNGERRIV 160 SIKEPLFRICGLAIHLDTERKYIIDKDKHLSAVCSEAASKKISAYDLLLNKIAIQLKVDVKDIISTDLCLCDCEPASLLS 240 LNKYIVGQGIDNLNGVFTSLQGFFSSEQHNQNSQQIDMFVAFDNEEIGSTNRRGAQSVFLTNTINRIHSILFNNESIQSI 320 YVAYAKSVVLSIDGAHASHPTVDVMEKNHPIRLNSGPVLKEHCGQKYMSDGLLRAMVVKAAGDIPTQTFVLKQSIIGGST 400 IGPHVASTTGMTTIDLGNPMLSMHSIREMCGAFDVDYMIQLIERSYTSFPDITF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_155340 2 -----MK|FT 0.086 . EDI_155340 6 -MKFTDK|VK 0.056 . EDI_155340 8 KFTDKVK|KK 0.057 . EDI_155340 9 FTDKVKK|KK 0.085 . EDI_155340 10 TDKVKKK|KK 0.158 . EDI_155340 11 DKVKKKK|KN 0.096 . EDI_155340 12 KVKKKKK|NK 0.106 . EDI_155340 14 KKKKKNK|KR 0.062 . EDI_155340 15 KKKKNKK|RK 0.108 . EDI_155340 16 KKKNKKR|KI 0.258 . EDI_155340 17 KKNKKRK|IL 0.135 . EDI_155340 20 KKRKILK|LC 0.062 . EDI_155340 29 IMSSSAK|DF 0.087 . EDI_155340 51 ACQTVQK|RL 0.069 . EDI_155340 52 CQTVQKR|LE 0.184 . EDI_155340 62 AGYVHLK|EN 0.070 . EDI_155340 73 WNLELHK|KY 0.062 . EDI_155340 74 NLELHKK|YY 0.113 . EDI_155340 79 KKYYLVR|DD 0.108 . EDI_155340 88 SSLIAFR|TN 0.090 . EDI_155340 97 SANATSR|IF 0.099 . EDI_155340 111 LDSPFLK|LK 0.058 . EDI_155340 113 SPFLKLK|PY 0.069 . EDI_155340 120 PYPDLIK|NN 0.055 . EDI_155340 142 WHTWIDR|DL 0.128 . EDI_155340 149 DLGISGR|VI 0.084 . EDI_155340 157 ILTNGER|RI 0.067 . EDI_155340 158 LTNGERR|IV 0.344 . EDI_155340 163 RRIVSIK|EP 0.061 . EDI_155340 168 IKEPLFR|IC 0.109 . EDI_155340 180 IHLDTER|KY 0.070 . EDI_155340 181 HLDTERK|YI 0.104 . EDI_155340 186 RKYIIDK|DK 0.069 . EDI_155340 188 YIIDKDK|HL 0.079 . EDI_155340 200 CSEAASK|KI 0.066 . EDI_155340 201 SEAASKK|IS 0.096 . EDI_155340 211 YDLLLNK|IA 0.058 . EDI_155340 217 KIAIQLK|VD 0.058 . EDI_155340 221 QLKVDVK|DI 0.069 . EDI_155340 243 SLLSLNK|YI 0.066 . EDI_155340 292 EIGSTNR|RG 0.071 . EDI_155340 293 IGSTNRR|GA 0.251 . EDI_155340 306 LTNTINR|IH 0.099 . EDI_155340 326 IYVAYAK|SV 0.095 . EDI_155340 347 TVDVMEK|NH 0.062 . EDI_155340 352 EKNHPIR|LN 0.099 . EDI_155340 360 NSGPVLK|EH 0.068 . EDI_155340 366 KEHCGQK|YM 0.085 . EDI_155340 374 MSDGLLR|AM 0.073 . EDI_155340 379 LRAMVVK|AA 0.146 . EDI_155340 392 TQTFVLK|QS 0.080 . EDI_155340 427 LSMHSIR|EM 0.128 . EDI_155340 444 MIQLIER|SY 0.106 . ____________________________^_________________

  • Fasta :-

    >EDI_155340 ATGAAATTTACTGATAAAGTCAAAAAAAAAAAGAAAAATAAAAAAAGAAAAATCTTAAAA CTTTGTATCATGTCATCTTCAGCTAAAGACTTCATCAATTTTTTAAATGAGGCTTCAGGA TCTCCATTTGTTGCTTGTCAAACTGTCCAGAAAAGACTTGAATCTGCTGGTTATGTTCAC CTTAAAGAAAATGAGGTTTGGAACCTTGAGCTTCATAAAAAGTACTATCTTGTTAGAGAC GATAGCAGTCTGATCGCATTCAGAACAAATAGTGCAAATGCCACATCAAGGATTTTTATT ACAAGCTCACACCTTGACTCTCCTTTCTTAAAATTAAAGCCATATCCTGATTTAATAAAG AATAACCTTGCACTAGTCTCTTGTGAAGTTTATGGTGGTGGAATTTGGCATACATGGATT GACCGTGATTTAGGAATATCTGGAAGAGTTATTCTAACTAATGGAGAAAGGCGTATTGTT TCAATCAAGGAGCCGTTGTTTAGAATTTGTGGATTAGCAATCCATCTTGACACTGAAAGA AAATACATAATCGACAAGGACAAGCATCTCTCTGCTGTATGTTCAGAAGCAGCATCAAAG AAAATTTCTGCATATGACTTACTTCTAAATAAAATTGCTATCCAATTAAAGGTAGATGTA AAAGACATTATTTCAACTGACCTTTGTCTCTGTGATTGTGAACCTGCATCATTATTATCT TTAAATAAATATATTGTTGGTCAAGGGATTGATAATTTAAACGGTGTTTTCACATCATTA CAAGGATTCTTCTCTAGTGAACAACATAACCAAAATTCTCAACAAATTGATATGTTTGTG GCATTTGATAATGAAGAAATTGGGTCAACAAATAGAAGAGGTGCACAAAGTGTTTTTTTA ACAAATACCATTAACCGTATTCATTCTATTCTTTTTAATAATGAAAGTATCCAATCAATT TATGTTGCTTATGCAAAATCAGTCGTTTTATCAATTGATGGAGCACACGCTTCTCATCCT ACTGTTGATGTAATGGAAAAAAATCATCCAATAAGACTTAATAGTGGACCAGTTTTAAAA GAACATTGCGGACAGAAGTATATGTCTGATGGATTATTACGTGCAATGGTCGTTAAAGCT GCTGGAGATATTCCTACTCAGACATTTGTTCTTAAACAGAGTATTATTGGTGGATCAACA ATCGGTCCACACGTTGCTTCAACAACTGGAATGACAACTATAGACCTTGGTAATCCAATG CTTTCTATGCATTCAATTCGTGAAATGTGTGGAGCTTTTGATGTGGATTACATGATTCAG TTAATAGAAAGAAGTTACACTTCTTTCCCTGATATTACTTTTTAA
  • Download Fasta

  • Fasta :-

    MKFTDKVKKKKKNKKRKILKLCIMSSSAKDFINFLNEASGSPFVACQTVQKRLESAGYVH LKENEVWNLELHKKYYLVRDDSSLIAFRTNSANATSRIFITSSHLDSPFLKLKPYPDLIK NNLALVSCEVYGGGIWHTWIDRDLGISGRVILTNGERRIVSIKEPLFRICGLAIHLDTER KYIIDKDKHLSAVCSEAASKKISAYDLLLNKIAIQLKVDVKDIISTDLCLCDCEPASLLS LNKYIVGQGIDNLNGVFTSLQGFFSSEQHNQNSQQIDMFVAFDNEEIGSTNRRGAQSVFL TNTINRIHSILFNNESIQSIYVAYAKSVVLSIDGAHASHPTVDVMEKNHPIRLNSGPVLK EHCGQKYMSDGLLRAMVVKAAGDIPTQTFVLKQSIIGGSTIGPHVASTTGMTTIDLGNPM LSMHSIREMCGAFDVDYMIQLIERSYTSFPDITF

  • title: metal binding site
  • coordinates: H104,D251,E285,E286,D333,H424
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_155340425 SLSMHSIREM0.993unspEDI_155340425 SLSMHSIREM0.993unspEDI_155340425 SLSMHSIREM0.993unspEDI_155340161 SRRIVSIKEP0.997unspEDI_155340203 SSKKISAYDL0.994unsp

EDI_155340      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India