EDI_156850 | cysteine proteinase 3 precursor, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_156850SP0.0147920.9845480.000660CS pos: 20-21. SWA-AK. Pr: 0.6209
No Results

  • Fasta :-

    >EDI_156850 MFGLLLFVAAATAIDFKSWAAKNNKHFTAVEALRRRAIFNMNAKFVAKFNKANSFELSVD GPFAAMTNEEYNHLLRVHETEAAADSVYDNTIITASSKDWRAEGKVTPVRDQGNCGSCYS FSSLAVLESRLLIAGSKYNQNNLDLSEQQIVDCSTANNGCNGGSLSATYLYVKNNGVTDE ASYPYTATKGTCKAFTPKVKTTGLTHVTPNEDALTSALEQGPVAVCIDAGKASFQLYKSG VYDEPKCSKTVNHGVAAVGYGTQDGKDYYIVKNSWGTSWGDKGYILMSRNKNNQCAIASV AYFPNGAHDAN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_156850.fa Sequence name : EDI_156850 Sequence length : 311 VALUES OF COMPUTED PARAMETERS Coef20 : 4.626 CoefTot : 0.367 ChDiff : 1 ZoneTo : 55 KR : 9 DE : 2 CleavSite : 36 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.129 1.712 0.070 0.621 MesoH : -0.635 0.101 -0.378 0.122 MuHd_075 : 41.747 21.754 11.937 8.132 MuHd_095 : 39.344 21.110 10.355 8.622 MuHd_100 : 33.130 18.507 8.428 7.735 MuHd_105 : 25.105 18.062 7.053 6.655 Hmax_075 : 16.683 16.333 2.884 5.705 Hmax_095 : 13.300 14.500 0.961 5.380 Hmax_100 : 8.300 11.700 -0.501 4.540 Hmax_105 : 13.600 15.400 1.252 5.940 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6275 0.3725 DFMC : 0.5674 0.4326
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 311 EDI_156850 MFGLLLFVAAATAIDFKSWAAKNNKHFTAVEALRRRAIFNMNAKFVAKFNKANSFELSVDGPFAAMTNEEYNHLLRVHET 80 EAAADSVYDNTIITASSKDWRAEGKVTPVRDQGNCGSCYSFSSLAVLESRLLIAGSKYNQNNLDLSEQQIVDCSTANNGC 160 NGGSLSATYLYVKNNGVTDEASYPYTATKGTCKAFTPKVKTTGLTHVTPNEDALTSALEQGPVAVCIDAGKASFQLYKSG 240 VYDEPKCSKTVNHGVAAVGYGTQDGKDYYIVKNSWGTSWGDKGYILMSRNKNNQCAIASVAYFPNGAHDAN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_156850 17 ATAIDFK|SW 0.085 . EDI_156850 22 FKSWAAK|NN 0.080 . EDI_156850 25 WAAKNNK|HF 0.081 . EDI_156850 34 TAVEALR|RR 0.073 . EDI_156850 35 AVEALRR|RA 0.105 . EDI_156850 36 VEALRRR|AI 0.136 . EDI_156850 44 IFNMNAK|FV 0.090 . EDI_156850 48 NAKFVAK|FN 0.077 . EDI_156850 51 FVAKFNK|AN 0.080 . EDI_156850 76 EYNHLLR|VH 0.077 . EDI_156850 98 IITASSK|DW 0.079 . EDI_156850 101 ASSKDWR|AE 0.171 . EDI_156850 105 DWRAEGK|VT 0.062 . EDI_156850 110 GKVTPVR|DQ 0.125 . EDI_156850 130 LAVLESR|LL 0.082 . EDI_156850 137 LLIAGSK|YN 0.065 . EDI_156850 173 ATYLYVK|NN 0.061 . EDI_156850 189 YPYTATK|GT 0.082 . EDI_156850 193 ATKGTCK|AF 0.071 . EDI_156850 198 CKAFTPK|VK 0.081 . EDI_156850 200 AFTPKVK|TT 0.068 . EDI_156850 231 VCIDAGK|AS 0.065 . EDI_156850 238 ASFQLYK|SG 0.072 . EDI_156850 246 GVYDEPK|CS 0.072 . EDI_156850 249 DEPKCSK|TV 0.075 . EDI_156850 266 YGTQDGK|DY 0.068 . EDI_156850 272 KDYYIVK|NS 0.058 . EDI_156850 282 GTSWGDK|GY 0.065 . EDI_156850 289 GYILMSR|NK 0.073 . EDI_156850 291 ILMSRNK|NN 0.063 . ____________________________^_________________

  • Fasta :-

    >EDI_156850 ATGTTTGGTTTACTTTTATTTGTAGCTGCTGCTACAGCCATTGACTTCAAGAGTTGGGCT GCTAAAAACAATAAACACTTCACTGCTGTTGAAGCACTCAGAAGAAGAGCTATCTTCAAT ATGAATGCTAAATTTGTTGCTAAATTCAATAAGGCAAATTCATTTGAATTATCTGTTGAT GGACCATTTGCTGCTATGACAAATGAAGAATATAATCATTTATTAAGAGTACATGAAACT GAAGCAGCTGCTGACTCAGTTTATGATAACACTATTATTACTGCTAGTTCTAAAGATTGG AGAGCTGAAGGTAAAGTCACTCCAGTTAGAGATCAAGGAAATTGTGGATCATGTTATTCA TTCTCATCACTTGCTGTCCTTGAATCAAGATTATTAATTGCTGGAAGCAAATACAACCAA AACAATCTTGATCTTTCAGAACAACAAATTGTTGACTGTAGTACTGCTAATAATGGATGT AATGGAGGATCTCTCTCTGCTACTTATCTTTATGTTAAAAATAATGGTGTTACTGATGAA GCTTCATACCCATACACAGCTACTAAGGGAACTTGCAAAGCTTTCACTCCAAAAGTTAAA ACTACTGGTTTAACTCATGTCACTCCAAATGAAGATGCTTTGACTTCAGCTCTTGAACAA GGACCAGTTGCTGTTTGTATTGATGCTGGTAAAGCTTCATTCCAATTATATAAATCTGGA GTTTATGATGAACCAAAATGTAGTAAAACTGTTAACCATGGTGTCGCCGCTGTTGGATAT GGTACTCAAGATGGTAAAGACTATTATATTGTTAAGAACTCATGGGGAACTTCATGGGGA GACAAAGGTTATATTTTAATGTCAAGAAATAAGAACAACCAATGTGCTATTGCTTCAGTT GCTTATTTCCCAAATGGTGCTCATGACGCTAACTAA
  • Download Fasta

  • Fasta :-

    MFGLLLFVAAATAIDFKSWAAKNNKHFTAVEALRRRAIFNMNAKFVAKFNKANSFELSVD GPFAAMTNEEYNHLLRVHETEAAADSVYDNTIITASSKDWRAEGKVTPVRDQGNCGSCYS FSSLAVLESRLLIAGSKYNQNNLDLSEQQIVDCSTANNGCNGGSLSATYLYVKNNGVTDE ASYPYTATKGTCKAFTPKVKTTGLTHVTPNEDALTSALEQGPVAVCIDAGKASFQLYKSG VYDEPKCSKTVNHGVAAVGYGTQDGKDYYIVKNSWGTSWGDKGYILMSRNKNNQCAIASV AYFPNGAHDAN

  • title: active site
  • coordinates: Q112,C118,H253,N273
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EDI_156850T2010.5130.079EDI_156850T2080.5060.339EDI_156850T1960.5040.078
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EDI_156850T2010.5130.079EDI_156850T2080.5060.339EDI_156850T1960.5040.078
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_15685086 SAAADSVYDN0.995unspEDI_15685096 SIITASSKDW0.997unsp

EDI_156850      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India