EDI_168350 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
EDI_168350SP0.0062000.9937560.000044CS pos: 22-23. KWA-YN. Pr: 0.6085
No Results

  • Fasta :-

    >EDI_168350 MRLGYLLLFILIVYGKLPNKWAYNYPTNRYYQLDKGTCWAFGIIGMLEHSYRENGIKKGF LKEEEFVRLNVQSFGILMVDACKKYPSVCNTPGDDVIFGSTEGGEINWFYSFPFLYDKIL PSAVCPYTATVDTQFECNGMDEALKTNPIKFNITEMLTTYNEEQTKELLLKVKIPIGFGA LIHDAKYYLPCTEEYKNFCDESVYNVIECPENMKYLAEKCAYIVMPMYSTDGEFNYHNEI EPEGGHAMVTVGYNDEYVTHEGCKGGFILKNSWNDTVYGPSIANTARGVRGSHSVKYFMN QLTAEEERKVCPNAQDPMNWYICDDACVINEELHKTIVNELYQAYKLQCVNPEEHFCETG YDYYLTELKADSKSPMNHYYIATFTKYDSTGKKLDTITLPSLPTSIIGMIFTPVEDQLIR LHDSEEFCGHYMFPYCILNKHLPFWGGYVGSHFEIEWDDRSYLINKDKYPEFDYKFIAQS TFVQNLKLVDQKAGVPFLNERI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_168350.fa Sequence name : EDI_168350 Sequence length : 502 VALUES OF COMPUTED PARAMETERS Coef20 : 3.916 CoefTot : -2.304 ChDiff : -23 ZoneTo : 47 KR : 5 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.865 1.700 0.258 0.648 MesoH : -0.390 0.201 -0.311 0.245 MuHd_075 : 39.212 24.996 10.058 8.240 MuHd_095 : 22.868 15.001 8.066 5.423 MuHd_100 : 22.157 16.518 8.338 4.869 MuHd_105 : 25.735 17.746 7.512 5.594 Hmax_075 : 7.700 6.300 -0.285 3.299 Hmax_095 : 7.300 -3.100 -2.719 5.050 Hmax_100 : 16.200 17.300 -2.619 7.160 Hmax_105 : 19.717 14.700 4.881 8.050 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8749 0.1251 DFMC : 0.8219 0.1781
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 502 EDI_168350 MRLGYLLLFILIVYGKLPNKWAYNYPTNRYYQLDKGTCWAFGIIGMLEHSYRENGIKKGFLKEEEFVRLNVQSFGILMVD 80 ACKKYPSVCNTPGDDVIFGSTEGGEINWFYSFPFLYDKILPSAVCPYTATVDTQFECNGMDEALKTNPIKFNITEMLTTY 160 NEEQTKELLLKVKIPIGFGALIHDAKYYLPCTEEYKNFCDESVYNVIECPENMKYLAEKCAYIVMPMYSTDGEFNYHNEI 240 EPEGGHAMVTVGYNDEYVTHEGCKGGFILKNSWNDTVYGPSIANTARGVRGSHSVKYFMNQLTAEEERKVCPNAQDPMNW 320 YICDDACVINEELHKTIVNELYQAYKLQCVNPEEHFCETGYDYYLTELKADSKSPMNHYYIATFTKYDSTGKKLDTITLP 400 SLPTSIIGMIFTPVEDQLIRLHDSEEFCGHYMFPYCILNKHLPFWGGYVGSHFEIEWDDRSYLINKDKYPEFDYKFIAQS 480 TFVQNLKLVDQKAGVPFLNERI 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_168350 2 -----MR|LG 0.075 . EDI_168350 16 ILIVYGK|LP 0.056 . EDI_168350 20 YGKLPNK|WA 0.064 . EDI_168350 29 YNYPTNR|YY 0.085 . EDI_168350 35 RYYQLDK|GT 0.085 . EDI_168350 52 MLEHSYR|EN 0.124 . EDI_168350 57 YRENGIK|KG 0.068 . EDI_168350 58 RENGIKK|GF 0.135 . EDI_168350 62 IKKGFLK|EE 0.068 . EDI_168350 68 KEEEFVR|LN 0.083 . EDI_168350 83 LMVDACK|KY 0.058 . EDI_168350 84 MVDACKK|YP 0.093 . EDI_168350 118 FPFLYDK|IL 0.059 . EDI_168350 145 GMDEALK|TN 0.058 . EDI_168350 150 LKTNPIK|FN 0.077 . EDI_168350 166 YNEEQTK|EL 0.059 . EDI_168350 171 TKELLLK|VK 0.074 . EDI_168350 173 ELLLKVK|IP 0.059 . EDI_168350 186 ALIHDAK|YY 0.071 . EDI_168350 196 PCTEEYK|NF 0.057 . EDI_168350 214 ECPENMK|YL 0.060 . EDI_168350 219 MKYLAEK|CA 0.092 . EDI_168350 264 VTHEGCK|GG 0.065 . EDI_168350 270 KGGFILK|NS 0.055 . EDI_168350 287 SIANTAR|GV 0.257 . EDI_168350 290 NTARGVR|GS 0.259 . EDI_168350 296 RGSHSVK|YF 0.095 . EDI_168350 308 LTAEEER|KV 0.119 . EDI_168350 309 TAEEERK|VC 0.078 . EDI_168350 335 INEELHK|TI 0.064 . EDI_168350 346 ELYQAYK|LQ 0.061 . EDI_168350 369 YYLTELK|AD 0.060 . EDI_168350 373 ELKADSK|SP 0.065 . EDI_168350 386 YIATFTK|YD 0.078 . EDI_168350 392 KYDSTGK|KL 0.062 . EDI_168350 393 YDSTGKK|LD 0.108 . EDI_168350 420 VEDQLIR|LH 0.079 . EDI_168350 440 PYCILNK|HL 0.059 . EDI_168350 460 EIEWDDR|SY 0.091 . EDI_168350 466 RSYLINK|DK 0.076 . EDI_168350 468 YLINKDK|YP 0.068 . EDI_168350 475 YPEFDYK|FI 0.083 . EDI_168350 487 TFVQNLK|LV 0.076 . EDI_168350 492 LKLVDQK|AG 0.061 . EDI_168350 501 VPFLNER|I- 0.084 . ____________________________^_________________

  • Fasta :-

    >EDI_168350 ATGAGATTAGGATATTTACTTTTATTTATATTAATAGTTTATGGAAAATTACCTAATAAA TGGGCGTATAATTATCCAACAAATAGATATTATCAATTAGATAAAGGAACGTGTTGGGCA TTTGGTATTATTGGAATGTTAGAACATTCATATCGTGAAAATGGAATTAAAAAAGGATTT TTAAAAGAAGAAGAATTTGTTAGATTAAATGTTCAATCATTTGGAATATTAATGGTTGAT GCATGTAAAAAATATCCAAGTGTTTGTAATACACCAGGAGATGATGTTATTTTCGGTTCA ACTGAAGGTGGTGAAATTAATTGGTTTTATTCATTCCCATTTTTATATGATAAAATACTT CCATCAGCTGTTTGTCCTTATACTGCAACTGTTGATACTCAATTTGAATGTAATGGAATG GATGAAGCATTAAAAACTAATCCAATTAAATTTAATATTACTGAAATGTTAACTACATAT AATGAAGAACAAACTAAAGAATTATTATTAAAAGTAAAAATTCCAATTGGTTTTGGTGCA TTAATTCATGATGCTAAATATTATCTTCCATGTACTGAAGAATATAAAAATTTCTGTGAT GAAAGTGTTTATAATGTTATCGAATGTCCAGAAAATATGAAATATTTAGCTGAAAAATGT GCATATATAGTTATGCCAATGTATAGCACTGATGGTGAATTTAATTATCATAATGAAATT GAACCAGAAGGTGGACATGCTATGGTTACAGTTGGATATAATGATGAATATGTTACTCAT GAAGGATGTAAAGGTGGATTTATTTTAAAGAATTCATGGAATGATACTGTTTATGGACCA TCTATTGCTAATACTGCAAGAGGAGTAAGAGGATCTCATAGTGTTAAATATTTTATGAAT CAATTAACTGCTGAAGAAGAACGTAAAGTTTGTCCAAATGCACAAGATCCAATGAATTGG TATATTTGTGATGATGCATGTGTTATTAATGAAGAACTTCATAAAACTATTGTTAATGAA TTATATCAAGCATATAAATTACAATGTGTTAATCCAGAAGAACATTTTTGTGAAACTGGA TATGATTATTATTTAACTGAATTAAAAGCTGATTCTAAAAGTCCTATGAATCATTATTAC ATTGCTACATTTACTAAATATGACTCAACTGGAAAGAAACTTGATACTATCACATTACCA TCATTACCTACTTCTATTATTGGTATGATCTTTACCCCAGTTGAAGACCAATTGATTAGA CTTCATGATAGTGAAGAATTTTGTGGACATTACATGTTCCCATATTGTATCCTCAACAAA CACTTACCATTCTGGGGAGGCTATGTTGGAAGTCATTTTGAAATTGAATGGGATGACAGA AGTTATTTAATTAATAAAGATAAATATCCTGAATTTGATTATAAATTTATTGCACAATCT ACATTCGTCCAAAACTTAAAATTAGTCGATCAAAAGGCTGGTGTTCCATTCTTGAATGAA AGAATTTAA
  • Download Fasta

  • Fasta :-

    MRLGYLLLFILIVYGKLPNKWAYNYPTNRYYQLDKGTCWAFGIIGMLEHSYRENGIKKGF LKEEEFVRLNVQSFGILMVDACKKYPSVCNTPGDDVIFGSTEGGEINWFYSFPFLYDKIL PSAVCPYTATVDTQFECNGMDEALKTNPIKFNITEMLTTYNEEQTKELLLKVKIPIGFGA LIHDAKYYLPCTEEYKNFCDESVYNVIECPENMKYLAEKCAYIVMPMYSTDGEFNYHNEI EPEGGHAMVTVGYNDEYVTHEGCKGGFILKNSWNDTVYGPSIANTARGVRGSHSVKYFMN QLTAEEERKVCPNAQDPMNWYICDDACVINEELHKTIVNELYQAYKLQCVNPEEHFCETG YDYYLTELKADSKSPMNHYYIATFTKYDSTGKKLDTITLPSLPTSIIGMIFTPVEDQLIR LHDSEEFCGHYMFPYCILNKHLPFWGGYVGSHFEIEWDDRSYLINKDKYPEFDYKFIAQS TFVQNLKLVDQKAGVPFLNERI

  • title: active site
  • coordinates: Q32,C38,H246,N271
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_168350374 SADSKSPMNH0.991unspEDI_168350374 SADSKSPMNH0.991unspEDI_168350374 SADSKSPMNH0.991unspEDI_16835050 SMLEHSYREN0.993unspEDI_168350272 SILKNSWNDT0.992unsp

EDI_168350      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India