EDI_190570 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_190570OTHER0.9136880.0840870.002226
No Results

  • Fasta :-

    >EDI_190570 MGCSRITQKLFFTVLEWAVLIATIVSIILIITSVISFVLIPPMGKTDMETVTTDIIKNGT QRVVEVINQHTSSHSKPVKSSFVLSNLPPVKFQGKRSTCWAFSSIFQLEYAYNKNLSNKY ISLNEQAYAIDAVEACKADDYKGCPKKRFDYSTNTGYPQFLWRYSSLSNKVLPESICEYQ TNKDNEWKCDGKEQAQKTNALKFDVKSIATFRTIEELKEAVKQGPVSLVLVLVQGQYIIQ VDNKDNILGKIPGAEIKECPENSNLCVYIPSERITNDGEYIIPERANNRYGYHVVTIVGY NDNYISKDNTRGAFIIRDSTDDTLVYGSHSYQYLKGEHSEWDERTLCANVYNPLGWDSCV YMNPGPTGDSKVVKYDLKATCLNEKYIKENVLNTRKPTEFKCINSDLCDTTKRYFISSTS RSQYSSYLFTITFLEVNPNNTDEQKEITFTDFPLDSYNKFIQPIDSQIELIQTNTTFCGY RSLPYTVLDKISMAKTQDSYYGVQFNIEWDKQSYSNNGEFDYSQILKSIHEFPEYKGFLG PEPYQVRYED
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_190570.fa Sequence name : EDI_190570 Sequence length : 550 VALUES OF COMPUTED PARAMETERS Coef20 : 4.592 CoefTot : -0.145 ChDiff : -8 ZoneTo : 46 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.459 3.024 0.600 0.936 MesoH : 0.135 0.864 -0.200 0.348 MuHd_075 : 16.042 21.803 5.183 5.153 MuHd_095 : 38.623 26.484 12.280 8.097 MuHd_100 : 35.317 20.137 10.576 7.130 MuHd_105 : 30.209 24.669 7.679 6.998 Hmax_075 : 8.575 28.500 5.003 6.560 Hmax_095 : 17.325 19.863 4.686 5.915 Hmax_100 : 17.500 15.200 3.642 6.860 Hmax_105 : 15.900 30.975 4.758 9.275 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9522 0.0478 DFMC : 0.9543 0.0457
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 550 EDI_190570 MGCSRITQKLFFTVLEWAVLIATIVSIILIITSVISFVLIPPMGKTDMETVTTDIIKNGTQRVVEVINQHTSSHSKPVKS 80 SFVLSNLPPVKFQGKRSTCWAFSSIFQLEYAYNKNLSNKYISLNEQAYAIDAVEACKADDYKGCPKKRFDYSTNTGYPQF 160 LWRYSSLSNKVLPESICEYQTNKDNEWKCDGKEQAQKTNALKFDVKSIATFRTIEELKEAVKQGPVSLVLVLVQGQYIIQ 240 VDNKDNILGKIPGAEIKECPENSNLCVYIPSERITNDGEYIIPERANNRYGYHVVTIVGYNDNYISKDNTRGAFIIRDST 320 DDTLVYGSHSYQYLKGEHSEWDERTLCANVYNPLGWDSCVYMNPGPTGDSKVVKYDLKATCLNEKYIKENVLNTRKPTEF 400 KCINSDLCDTTKRYFISSTSRSQYSSYLFTITFLEVNPNNTDEQKEITFTDFPLDSYNKFIQPIDSQIELIQTNTTFCGY 480 RSLPYTVLDKISMAKTQDSYYGVQFNIEWDKQSYSNNGEFDYSQILKSIHEFPEYKGFLGPEPYQVRYED 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_190570 5 --MGCSR|IT 0.096 . EDI_190570 9 CSRITQK|LF 0.079 . EDI_190570 45 LIPPMGK|TD 0.056 . EDI_190570 57 VTTDIIK|NG 0.057 . EDI_190570 62 IKNGTQR|VV 0.156 . EDI_190570 76 HTSSHSK|PV 0.089 . EDI_190570 79 SHSKPVK|SS 0.094 . EDI_190570 91 SNLPPVK|FQ 0.069 . EDI_190570 95 PVKFQGK|RS 0.058 . EDI_190570 96 VKFQGKR|ST 0.361 . EDI_190570 114 LEYAYNK|NL 0.063 . EDI_190570 119 NKNLSNK|YI 0.101 . EDI_190570 137 DAVEACK|AD 0.061 . EDI_190570 142 CKADDYK|GC 0.073 . EDI_190570 146 DYKGCPK|KR 0.058 . EDI_190570 147 YKGCPKK|RF 0.118 . EDI_190570 148 KGCPKKR|FD 0.205 . EDI_190570 163 YPQFLWR|YS 0.117 . EDI_190570 170 YSSLSNK|VL 0.068 . EDI_190570 183 CEYQTNK|DN 0.074 . EDI_190570 188 NKDNEWK|CD 0.081 . EDI_190570 192 EWKCDGK|EQ 0.064 . EDI_190570 197 GKEQAQK|TN 0.064 . EDI_190570 202 QKTNALK|FD 0.068 . EDI_190570 206 ALKFDVK|SI 0.088 . EDI_190570 212 KSIATFR|TI 0.105 . EDI_190570 218 RTIEELK|EA 0.070 . EDI_190570 222 ELKEAVK|QG 0.058 . EDI_190570 244 IIQVDNK|DN 0.069 . EDI_190570 250 KDNILGK|IP 0.083 . EDI_190570 257 IPGAEIK|EC 0.059 . EDI_190570 273 VYIPSER|IT 0.094 . EDI_190570 285 EYIIPER|AN 0.084 . EDI_190570 289 PERANNR|YG 0.097 . EDI_190570 307 NDNYISK|DN 0.079 . EDI_190570 311 ISKDNTR|GA 0.150 . EDI_190570 317 RGAFIIR|DS 0.106 . EDI_190570 335 HSYQYLK|GE 0.061 . EDI_190570 344 HSEWDER|TL 0.083 . EDI_190570 371 GPTGDSK|VV 0.071 . EDI_190570 374 GDSKVVK|YD 0.084 . EDI_190570 378 VVKYDLK|AT 0.062 . EDI_190570 385 ATCLNEK|YI 0.063 . EDI_190570 388 LNEKYIK|EN 0.055 . EDI_190570 395 ENVLNTR|KP 0.071 . EDI_190570 396 NVLNTRK|PT 0.067 . EDI_190570 401 RKPTEFK|CI 0.068 . EDI_190570 412 DLCDTTK|RY 0.063 . EDI_190570 413 LCDTTKR|YF 0.151 . EDI_190570 421 FISSTSR|SQ 0.115 . EDI_190570 445 NNTDEQK|EI 0.060 . EDI_190570 459 PLDSYNK|FI 0.069 . EDI_190570 481 TTFCGYR|SL 0.103 . EDI_190570 490 PYTVLDK|IS 0.058 . EDI_190570 495 DKISMAK|TQ 0.063 . EDI_190570 511 FNIEWDK|QS 0.065 . EDI_190570 527 DYSQILK|SI 0.089 . EDI_190570 536 HEFPEYK|GF 0.064 . EDI_190570 547 PEPYQVR|YE 0.086 . ____________________________^_________________

  • Fasta :-

    >EDI_190570 ATGGGCTGTTCAAGGATCACTCAAAAACTCTTTTTTACAGTTTTAGAATGGGCAGTACTT ATTGCCACAATAGTTTCGATTATTTTGATTATAACATCTGTTATTTCCTTTGTTCTTATT CCTCCTATGGGAAAAACAGATATGGAAACAGTTACAACTGATATTATTAAAAATGGAACA CAACGAGTTGTCGAAGTTATTAATCAACACACATCATCTCATTCTAAACCAGTTAAATCA TCATTTGTATTAAGTAATCTTCCACCAGTAAAATTCCAAGGAAAAAGATCAACGTGTTGG GCTTTTAGCAGTATTTTCCAATTGGAATATGCTTATAATAAGAATTTATCTAATAAATAT ATTTCATTAAATGAACAAGCTTATGCTATTGATGCAGTTGAGGCATGTAAGGCTGATGAT TATAAAGGATGTCCAAAAAAGAGATTCGACTATAGTACAAATACAGGATATCCACAATTT TTATGGAGATACTCATCTCTTTCAAATAAAGTTCTTCCAGAATCTATTTGTGAATACCAA ACAAATAAAGATAACGAATGGAAATGTGATGGAAAAGAACAAGCACAAAAAACAAATGCA TTAAAATTTGATGTTAAATCAATTGCTACTTTTAGAACAATTGAAGAATTAAAAGAAGCT GTCAAACAAGGACCAGTTTCTCTTGTATTAGTTTTAGTTCAAGGACAATATATTATTCAA GTCGATAATAAAGATAATATTCTTGGTAAGATTCCAGGTGCTGAAATTAAAGAATGTCCA GAAAATTCAAATCTTTGTGTTTATATTCCATCTGAACGAATTACTAATGATGGAGAATAC ATTATTCCTGAAAGAGCAAATAACAGATATGGATATCATGTTGTTACTATTGTTGGGTAT AATGATAATTATATTAGTAAAGATAATACTCGTGGAGCATTCATTATTAGAGATTCTACT GATGACACTCTTGTTTATGGTAGTCATTCATATCAATATCTCAAAGGAGAACATAGTGAA TGGGATGAACGTACTCTTTGTGCTAATGTTTATAATCCACTTGGATGGGATTCTTGTGTC TATATGAATCCAGGACCAACTGGAGATTCTAAAGTTGTTAAATACGATTTAAAAGCAACT TGTTTAAATGAAAAGTATATCAAAGAGAATGTATTAAATACAAGAAAACCAACTGAATTT AAATGTATTAATAGTGATTTGTGTGATACTACTAAACGATATTTCATTTCATCAACTTCT AGGTCTCAATATTCATCATATCTCTTTACTATTACATTCTTAGAAGTTAATCCAAATAAT ACTGATGAACAAAAAGAAATTACGTTTACTGATTTCCCATTAGATTCTTATAATAAATTC ATTCAACCAATTGACTCACAAATTGAATTAATCCAAACAAATACTACATTTTGTGGATAT CGCTCTCTTCCTTATACTGTTCTTGATAAAATTTCTATGGCTAAGACTCAAGACAGTTAT TATGGTGTTCAATTCAATATTGAGTGGGACAAACAATCATATTCTAACAATGGTGAATTC GATTATTCACAAATACTTAAAAGTATTCATGAATTCCCAGAATACAAAGGGTTCCTTGGA CCAGAGCCATACCAAGTACGATATGAAGACTAA
  • Download Fasta

  • Fasta :-

    MGCSRITQKLFFTVLEWAVLIATIVSIILIITSVISFVLIPPMGKTDMETVTTDIIKNGT QRVVEVINQHTSSHSKPVKSSFVLSNLPPVKFQGKRSTCWAFSSIFQLEYAYNKNLSNKY ISLNEQAYAIDAVEACKADDYKGCPKKRFDYSTNTGYPQFLWRYSSLSNKVLPESICEYQ TNKDNEWKCDGKEQAQKTNALKFDVKSIATFRTIEELKEAVKQGPVSLVLVLVQGQYIIQ VDNKDNILGKIPGAEIKECPENSNLCVYIPSERITNDGEYIIPERANNRYGYHVVTIVGY NDNYISKDNTRGAFIIRDSTDDTLVYGSHSYQYLKGEHSEWDERTLCANVYNPLGWDSCV YMNPGPTGDSKVVKYDLKATCLNEKYIKENVLNTRKPTEFKCINSDLCDTTKRYFISSTS RSQYSSYLFTITFLEVNPNNTDEQKEITFTDFPLDSYNKFIQPIDSQIELIQTNTTFCGY RSLPYTVLDKISMAKTQDSYYGVQFNIEWDKQSYSNNGEFDYSQILKSIHEFPEYKGFLG PEPYQVRYED

  • title: active site
  • coordinates: Q93,C99,H293,D318
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_190570319 SIIRDSTDDT0.998unspEDI_190570339 SKGEHSEWDE0.991unsp

EDI_190570      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India