EDI_198000 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
EDI_198000OTHER0.9997990.0001040.000097
No Results

  • Fasta :-

    >EDI_198000 MLSWKPSYPPCPDLTSSIETIANAKEFINQLDEHLMNNNGVVLFEKIVTFIFNQPTLGYV AVPHYIRFNEKTPIPLINFVRYIVQYAPFDELPDCILPLIVSTAIELIKGHEPEDTLDDQ DNLLYELYKILIQAIIIDEKIIDLINKTIHIIINQLISIHPLQFKELRNTVYQLISYLPN KDEIMNQIVSQLITQYHQQFINSLFIKSNNSNKYCGMENCGATCYINSVIQQLHNNESFK ESILQSDCGDSCFILKTLFERMEQNKNWIVTRDIIENILGPSNKIDISVQDDAYLFLTNL LDILNEDNKIPTNNCINEFKIITKTILKCTECQKIRERNEINTSISVDSVNNESLDQALN NLIKEEEMNDIDCPFCNKKTKQIKQISYESSENLIIGINRNKTIEGGRSYKFNKRFEFPL KMKWKDKEMELNGLVLHSGTTEMGHYTSIIKDNNGKWWKCNDKVVVEYNEKRILEDGYGT VSNSLSASILFYKINESNQIQNSNKEQIQNISEYNSMNSIVHDKQLYEWTEKQIIDSSSQ WKSQECIDLITLLLYKGDYLFFKDINSLIPIIKNKSITIIQELVSKQNELPTIITDCIVG ITTLKNALICIELFDKSSENNTWITTKLVELIPKYTTSHQHILLSKLFLKCNEWFGLCEV TPYEMSILHLLIQSSSLSEESYQLLLVLCNYFQQWLIQNNIKFIQDVLSLITTTSQLNNI KQYKDSLKKLINTTGTLLNLLPLLKSLIQRLITEKDTEKQIILKDLIVTTQCTIKSENSR IEIMDYYMTLLLNHSILQECFEKFIN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_198000.fa Sequence name : EDI_198000 Sequence length : 806 VALUES OF COMPUTED PARAMETERS Coef20 : 3.474 CoefTot : -0.936 ChDiff : -21 ZoneTo : 12 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.129 1.765 0.195 0.611 MesoH : -0.164 0.642 -0.293 0.332 MuHd_075 : 10.158 2.741 4.193 0.950 MuHd_095 : 20.618 14.293 7.709 3.386 MuHd_100 : 20.305 12.942 6.634 3.578 MuHd_105 : 18.019 13.919 5.085 3.809 Hmax_075 : 8.400 2.275 1.502 3.255 Hmax_095 : 12.200 8.575 2.628 3.299 Hmax_100 : 12.200 7.600 2.592 3.630 Hmax_105 : 14.400 10.200 2.423 4.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9825 0.0175 DFMC : 0.9796 0.0204
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 806 EDI_198000 MLSWKPSYPPCPDLTSSIETIANAKEFINQLDEHLMNNNGVVLFEKIVTFIFNQPTLGYVAVPHYIRFNEKTPIPLINFV 80 RYIVQYAPFDELPDCILPLIVSTAIELIKGHEPEDTLDDQDNLLYELYKILIQAIIIDEKIIDLINKTIHIIINQLISIH 160 PLQFKELRNTVYQLISYLPNKDEIMNQIVSQLITQYHQQFINSLFIKSNNSNKYCGMENCGATCYINSVIQQLHNNESFK 240 ESILQSDCGDSCFILKTLFERMEQNKNWIVTRDIIENILGPSNKIDISVQDDAYLFLTNLLDILNEDNKIPTNNCINEFK 320 IITKTILKCTECQKIRERNEINTSISVDSVNNESLDQALNNLIKEEEMNDIDCPFCNKKTKQIKQISYESSENLIIGINR 400 NKTIEGGRSYKFNKRFEFPLKMKWKDKEMELNGLVLHSGTTEMGHYTSIIKDNNGKWWKCNDKVVVEYNEKRILEDGYGT 480 VSNSLSASILFYKINESNQIQNSNKEQIQNISEYNSMNSIVHDKQLYEWTEKQIIDSSSQWKSQECIDLITLLLYKGDYL 560 FFKDINSLIPIIKNKSITIIQELVSKQNELPTIITDCIVGITTLKNALICIELFDKSSENNTWITTKLVELIPKYTTSHQ 640 HILLSKLFLKCNEWFGLCEVTPYEMSILHLLIQSSSLSEESYQLLLVLCNYFQQWLIQNNIKFIQDVLSLITTTSQLNNI 720 KQYKDSLKKLINTTGTLLNLLPLLKSLIQRLITEKDTEKQIILKDLIVTTQCTIKSENSRIEIMDYYMTLLLNHSILQEC 800 FEKFIN 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ...... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_198000 5 --MLSWK|PS 0.061 . EDI_198000 25 ETIANAK|EF 0.065 . EDI_198000 46 GVVLFEK|IV 0.079 . EDI_198000 67 AVPHYIR|FN 0.082 . EDI_198000 71 YIRFNEK|TP 0.062 . EDI_198000 81 PLINFVR|YI 0.104 . EDI_198000 109 TAIELIK|GH 0.069 . EDI_198000 129 LLYELYK|IL 0.073 . EDI_198000 140 AIIIDEK|II 0.067 . EDI_198000 147 IIDLINK|TI 0.076 . EDI_198000 165 IHPLQFK|EL 0.063 . EDI_198000 168 LQFKELR|NT 0.093 . EDI_198000 181 ISYLPNK|DE 0.070 . EDI_198000 207 INSLFIK|SN 0.094 . EDI_198000 213 KSNNSNK|YC 0.094 . EDI_198000 240 HNNESFK|ES 0.071 . EDI_198000 256 DSCFILK|TL 0.063 . EDI_198000 261 LKTLFER|ME 0.077 . EDI_198000 266 ERMEQNK|NW 0.072 . EDI_198000 272 KNWIVTR|DI 0.150 . EDI_198000 284 ILGPSNK|ID 0.071 . EDI_198000 309 ILNEDNK|IP 0.056 . EDI_198000 320 NCINEFK|II 0.066 . EDI_198000 324 EFKIITK|TI 0.062 . EDI_198000 328 ITKTILK|CT 0.059 . EDI_198000 334 KCTECQK|IR 0.059 . EDI_198000 336 TECQKIR|ER 0.098 . EDI_198000 338 CQKIRER|NE 0.068 . EDI_198000 364 ALNNLIK|EE 0.063 . EDI_198000 378 DCPFCNK|KT 0.058 . EDI_198000 379 CPFCNKK|TK 0.099 . EDI_198000 381 FCNKKTK|QI 0.084 . EDI_198000 384 KKTKQIK|QI 0.072 . EDI_198000 400 LIIGINR|NK 0.084 . EDI_198000 402 IGINRNK|TI 0.072 . EDI_198000 408 KTIEGGR|SY 0.094 . EDI_198000 411 EGGRSYK|FN 0.149 . EDI_198000 414 RSYKFNK|RF 0.073 . EDI_198000 415 SYKFNKR|FE 0.151 . EDI_198000 421 RFEFPLK|MK 0.068 . EDI_198000 423 EFPLKMK|WK 0.066 . EDI_198000 425 PLKMKWK|DK 0.109 . EDI_198000 427 KMKWKDK|EM 0.070 . EDI_198000 451 HYTSIIK|DN 0.058 . EDI_198000 456 IKDNNGK|WW 0.062 . EDI_198000 459 NNGKWWK|CN 0.082 . EDI_198000 463 WWKCNDK|VV 0.063 . EDI_198000 471 VVEYNEK|RI 0.055 . EDI_198000 472 VEYNEKR|IL 0.272 . EDI_198000 493 ASILFYK|IN 0.069 . EDI_198000 505 QIQNSNK|EQ 0.069 . EDI_198000 524 NSIVHDK|QL 0.069 . EDI_198000 532 LYEWTEK|QI 0.065 . EDI_198000 542 DSSSQWK|SQ 0.100 . EDI_198000 556 ITLLLYK|GD 0.056 . EDI_198000 563 GDYLFFK|DI 0.084 . EDI_198000 573 SLIPIIK|NK 0.069 . EDI_198000 575 IPIIKNK|SI 0.126 . EDI_198000 586 IQELVSK|QN 0.059 . EDI_198000 605 VGITTLK|NA 0.058 . EDI_198000 616 CIELFDK|SS 0.072 . EDI_198000 627 NTWITTK|LV 0.076 . EDI_198000 634 LVELIPK|YT 0.071 . EDI_198000 646 QHILLSK|LF 0.062 . EDI_198000 650 LSKLFLK|CN 0.069 . EDI_198000 702 LIQNNIK|FI 0.085 . EDI_198000 721 SQLNNIK|QY 0.068 . EDI_198000 724 NNIKQYK|DS 0.082 . EDI_198000 728 QYKDSLK|KL 0.065 . EDI_198000 729 YKDSLKK|LI 0.087 . EDI_198000 745 NLLPLLK|SL 0.074 . EDI_198000 750 LKSLIQR|LI 0.111 . EDI_198000 755 QRLITEK|DT 0.084 . EDI_198000 759 TEKDTEK|QI 0.062 . EDI_198000 764 EKQIILK|DL 0.069 . EDI_198000 775 TTQCTIK|SE 0.074 . EDI_198000 780 IKSENSR|IE 0.087 . EDI_198000 803 LQECFEK|FI 0.071 . ____________________________^_________________

  • Fasta :-

    >EDI_198000 ATGCTCAGCTGGAAACCATCATATCCCCCTTGTCCTGATTTAACTTCTTCTATAGAAACA ATAGCAAATGCAAAAGAGTTCATTAATCAATTGGATGAACATCTCATGAATAATAATGGT GTTGTCTTATTTGAAAAAATTGTTACTTTTATCTTTAACCAACCTACTTTGGGTTATGTA GCTGTTCCTCATTACATTCGGTTCAACGAAAAAACTCCAATCCCTTTAATTAATTTTGTA AGATATATTGTTCAATATGCACCATTTGATGAATTACCAGATTGTATTCTCCCATTAATT GTATCAACAGCAATTGAACTAATTAAAGGACATGAACCTGAAGACACTTTAGATGATCAA GATAATTTATTGTATGAACTCTACAAAATTCTTATACAGGCAATTATTATTGATGAAAAA ATAATTGACTTAATCAATAAAACTATTCACATCATTATTAATCAACTTATTTCAATTCAT CCACTACAATTTAAAGAACTCAGAAATACTGTTTATCAACTTATATCTTATTTACCAAAT AAAGATGAAATAATGAATCAAATTGTAAGTCAATTAATCACTCAATATCACCAACAATTC ATTAATTCATTATTTATTAAATCTAATAATTCAAATAAATATTGTGGAATGGAGAATTGT GGTGCAACTTGTTATATTAATAGTGTCATTCAACAACTTCATAATAATGAATCTTTTAAA GAGTCTATTCTTCAAAGTGATTGTGGTGATTCTTGTTTCATATTAAAAACATTATTTGAA CGAATGGAACAAAACAAAAATTGGATTGTAACAAGAGATATTATTGAAAACATTCTTGGA CCATCTAACAAAATTGATATTAGTGTTCAAGATGATGCATATCTCTTCTTAACTAATTTA CTTGATATTCTTAATGAAGATAACAAAATACCAACTAACAATTGTATCAATGAATTTAAA ATTATAACAAAAACAATATTGAAATGTACAGAATGTCAAAAAATTCGTGAAAGAAATGAA ATAAACACATCAATATCTGTAGATTCTGTTAATAATGAATCATTAGATCAAGCACTAAAT AATTTAATTAAAGAAGAAGAAATGAATGATATTGATTGTCCATTTTGTAATAAGAAAACA AAACAAATCAAACAAATAAGTTATGAATCATCTGAGAATCTCATCATTGGAATTAATAGA AATAAAACTATTGAAGGAGGAAGAAGTTATAAATTCAATAAACGATTTGAGTTTCCTCTT AAAATGAAATGGAAAGATAAAGAAATGGAATTAAATGGACTTGTTTTACATAGTGGAACA ACAGAAATGGGACATTATACCTCAATCATTAAAGATAATAATGGAAAGTGGTGGAAATGT AATGATAAAGTTGTTGTTGAATATAATGAAAAAAGAATCCTTGAAGATGGATATGGAACG GTGAGTAATTCATTATCAGCATCAATTCTATTTTATAAAATAAATGAATCTAATCAAATT CAAAATTCTAACAAAGAACAAATTCAAAATATTAGTGAATATAACTCTATGAATAGTATT GTCCATGATAAACAACTTTATGAATGGACTGAAAAACAAATAATTGATTCTTCTTCACAA TGGAAGAGTCAAGAATGCATTGATTTAATTACTCTCTTACTCTATAAAGGAGATTATTTA TTCTTTAAAGATATTAATTCTTTAATTCCTATAATAAAAAATAAATCAATTACAATAATA CAAGAACTTGTTTCAAAACAAAATGAATTACCTACAATAATTACTGATTGTATTGTTGGT ATAACAACATTAAAAAATGCCTTAATATGTATTGAACTATTTGATAAATCATCAGAAAAT AATACCTGGATTACAACTAAACTTGTTGAATTAATACCAAAATATACTACTTCACATCAA CATATCCTTCTTTCAAAATTGTTCCTAAAATGTAATGAATGGTTTGGTTTATGTGAAGTA ACTCCATATGAAATGTCAATTCTTCACTTGCTTATCCAATCTTCTTCTCTTTCAGAAGAG TCATATCAACTACTTTTAGTTCTATGTAACTATTTTCAACAATGGCTTATTCAAAACAAT ATTAAATTTATTCAAGATGTACTATCATTAATTACTACTACATCTCAGTTAAATAATATT AAACAATACAAAGACTCATTAAAAAAACTCATCAATACTACAGGAACTCTTCTTAATCTT CTTCCTCTTCTTAAATCACTCATACAACGATTAATCACAGAAAAAGATACTGAAAAACAA ATAATATTGAAAGATTTAATTGTTACAACACAATGTACAATTAAATCAGAGAATAGTCGT ATAGAAATAATGGATTATTATATGACTCTTCTTTTAAACCATTCAATACTTCAAGAATGT TTTGAAAAATTTATTAATTGA
  • Download Fasta

  • Fasta :-

    MLSWKPSYPPCPDLTSSIETIANAKEFINQLDEHLMNNNGVVLFEKIVTFIFNQPTLGYV AVPHYIRFNEKTPIPLINFVRYIVQYAPFDELPDCILPLIVSTAIELIKGHEPEDTLDDQ DNLLYELYKILIQAIIIDEKIIDLINKTIHIIINQLISIHPLQFKELRNTVYQLISYLPN KDEIMNQIVSQLITQYHQQFINSLFIKSNNSNKYCGMENCGATCYINSVIQQLHNNESFK ESILQSDCGDSCFILKTLFERMEQNKNWIVTRDIIENILGPSNKIDISVQDDAYLFLTNL LDILNEDNKIPTNNCINEFKIITKTILKCTECQKIRERNEINTSISVDSVNNESLDQALN NLIKEEEMNDIDCPFCNKKTKQIKQISYESSENLIIGINRNKTIEGGRSYKFNKRFEFPL KMKWKDKEMELNGLVLHSGTTEMGHYTSIIKDNNGKWWKCNDKVVVEYNEKRILEDGYGT VSNSLSASILFYKINESNQIQNSNKEQIQNISEYNSMNSIVHDKQLYEWTEKQIIDSSSQ WKSQECIDLITLLLYKGDYLFFKDINSLIPIIKNKSITIIQELVSKQNELPTIITDCIVG ITTLKNALICIELFDKSSENNTWITTKLVELIPKYTTSHQHILLSKLFLKCNEWFGLCEV TPYEMSILHLLIQSSSLSEESYQLLLVLCNYFQQWLIQNNIKFIQDVLSLITTTSQLNNI KQYKDSLKKLINTTGTLLNLLPLLKSLIQRLITEKDTEKQIILKDLIVTTQCTIKSENSR IEIMDYYMTLLLNHSILQECFEKFIN

  • title: Active Site
  • coordinates: N219,C224,H445,D462
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_198000409 SEGGRSYKFN0.995unspEDI_198000779 SKSENSRIEI0.991unsp

EDI_198000      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India