EDI_220270 | hypothetical protein

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No Results
No Results

  • Fasta :-

    >EDI_220270 MNQLTAEEERKVCPNAQDPMNWYICDDACVINEELHKTIVNELYQAYKLQCVNPEEHFCE TGYDYYLTELKADSKSPMNHYYIATFTKYDSTGKKLDTITLPSLPTSIIGMIFTPVEDQL IRLHDSEEFCGHYMFPYCILNKHLPFWGGYVGSHFEIEWDDRSYLINKDKYPEFDYKFIA QSTFVQNLKLVDQKAGVPFLNERI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_220270.fa Sequence name : EDI_220270 Sequence length : 204 VALUES OF COMPUTED PARAMETERS Coef20 : 3.209 CoefTot : -0.026 ChDiff : -13 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.865 1.312 0.258 0.586 MesoH : -0.433 0.094 -0.392 0.244 MuHd_075 : 7.553 1.547 2.316 0.612 MuHd_095 : 34.507 21.747 9.626 6.739 MuHd_100 : 28.698 17.085 7.958 5.591 MuHd_105 : 17.774 9.819 6.058 3.416 Hmax_075 : -12.950 -3.500 -3.325 -0.210 Hmax_095 : -1.400 5.687 -1.237 1.942 Hmax_100 : -1.400 4.000 -1.452 1.890 Hmax_105 : -4.000 3.850 -1.452 1.295 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9602 0.0398 DFMC : 0.9354 0.0646
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 204 EDI_220270 MNQLTAEEERKVCPNAQDPMNWYICDDACVINEELHKTIVNELYQAYKLQCVNPEEHFCETGYDYYLTELKADSKSPMNH 80 YYIATFTKYDSTGKKLDTITLPSLPTSIIGMIFTPVEDQLIRLHDSEEFCGHYMFPYCILNKHLPFWGGYVGSHFEIEWD 160 DRSYLINKDKYPEFDYKFIAQSTFVQNLKLVDQKAGVPFLNERI 240 ................................................................................ 80 ................................................................................ 160 ............................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_220270 10 LTAEEER|KV 0.119 . EDI_220270 11 TAEEERK|VC 0.078 . EDI_220270 37 INEELHK|TI 0.064 . EDI_220270 48 ELYQAYK|LQ 0.061 . EDI_220270 71 YYLTELK|AD 0.060 . EDI_220270 75 ELKADSK|SP 0.065 . EDI_220270 88 YIATFTK|YD 0.078 . EDI_220270 94 KYDSTGK|KL 0.062 . EDI_220270 95 YDSTGKK|LD 0.108 . EDI_220270 122 VEDQLIR|LH 0.079 . EDI_220270 142 PYCILNK|HL 0.059 . EDI_220270 162 EIEWDDR|SY 0.091 . EDI_220270 168 RSYLINK|DK 0.076 . EDI_220270 170 YLINKDK|YP 0.068 . EDI_220270 177 YPEFDYK|FI 0.083 . EDI_220270 189 TFVQNLK|LV 0.076 . EDI_220270 194 LKLVDQK|AG 0.061 . EDI_220270 203 VPFLNER|I- 0.084 . ____________________________^_________________

  • Fasta :-

    >EDI_220270 ATGAATCAATTAACTGCTGAAGAAGAACGTAAAGTTTGTCCAAATGCACAAGATCCAATG AATTGGTATATTTGTGATGATGCATGTGTTATTAATGAAGAACTTCATAAAACTATTGTT AATGAATTATATCAAGCATATAAATTACAATGTGTTAATCCAGAAGAACATTTTTGTGAA ACTGGATATGATTATTATTTAACTGAATTAAAAGCTGATTCTAAAAGTCCTATGAATCAT TATTACATTGCTACATTTACTAAATATGACTCAACTGGAAAGAAACTTGATACTATCACA TTACCATCATTACCTACTTCTATTATTGGTATGATCTTTACCCCAGTTGAAGACCAATTG ATTAGACTTCATGATAGTGAAGAATTTTGTGGACATTACATGTTCCCATATTGTATCCTC AACAAACACTTACCATTCTGGGGAGGCTATGTTGGAAGTCATTTTGAAATTGAATGGGAT GACAGAAGTTATTTAATTAATAAAGATAAATATCCTGAATTTGATTATAAATTTATTGCA CAATCTACATTCGTCCAAAACTTAAAATTAGTCGATCAAAAGGCTGGTGTTCCATTCTTG AATGAAAGAATTTAA
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  • Fasta :-

    No Results
    No Results
IDSitePositionGscoreIscore
EDI_220270T50.5060.040
IDSitePositionGscoreIscore
EDI_220270T50.5060.040
IDSitePeptideScoreMethod
EDI_22027076 SADSKSPMNH0.991unsp

EDI_220270      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India