EDI_220380 | proteasome subunit alpha type-3, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_220380OTHER0.8195350.1508460.029619
No Results

  • Fasta :-

    >EDI_220380 MYMQNYTLYGSLRPFGCSLLIGGVDQHGYSLHYIEPSGTTYGYFANGIGKGKQICKNELE KINFSQITCEEALIKLVEIIDLCHSEWKDKPYEIELSWISEKTNNIVKKVDKEMKQKIID QARNKQMHQN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_220380.fa Sequence name : EDI_220380 Sequence length : 130 VALUES OF COMPUTED PARAMETERS Coef20 : 3.830 CoefTot : -1.166 ChDiff : 0 ZoneTo : 24 KR : 1 DE : 0 CleavSite : 23 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.859 1.282 0.190 0.461 MesoH : -0.773 0.035 -0.409 0.185 MuHd_075 : 20.443 13.441 6.472 5.111 MuHd_095 : 23.964 14.589 3.269 4.304 MuHd_100 : 18.783 10.888 3.069 3.888 MuHd_105 : 17.383 10.260 3.116 3.700 Hmax_075 : 15.050 15.750 4.783 5.040 Hmax_095 : 11.550 9.713 0.592 3.950 Hmax_100 : 14.300 9.100 2.218 5.940 Hmax_105 : 15.983 15.167 3.530 6.113 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8016 0.1984 DFMC : 0.9175 0.0825
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 130 EDI_220380 MYMQNYTLYGSLRPFGCSLLIGGVDQHGYSLHYIEPSGTTYGYFANGIGKGKQICKNELEKINFSQITCEEALIKLVEII 80 DLCHSEWKDKPYEIELSWISEKTNNIVKKVDKEMKQKIIDQARNKQMHQN 160 ................................................................................ 80 .................................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_220380 13 TLYGSLR|PF 0.123 . EDI_220380 50 FANGIGK|GK 0.066 . EDI_220380 52 NGIGKGK|QI 0.077 . EDI_220380 56 KGKQICK|NE 0.059 . EDI_220380 61 CKNELEK|IN 0.069 . EDI_220380 75 CEEALIK|LV 0.076 . EDI_220380 88 LCHSEWK|DK 0.072 . EDI_220380 90 HSEWKDK|PY 0.084 . EDI_220380 102 LSWISEK|TN 0.064 . EDI_220380 108 KTNNIVK|KV 0.093 . EDI_220380 109 TNNIVKK|VD 0.130 . EDI_220380 112 IVKKVDK|EM 0.067 . EDI_220380 115 KVDKEMK|QK 0.063 . EDI_220380 117 DKEMKQK|II 0.086 . EDI_220380 123 KIIDQAR|NK 0.099 . EDI_220380 125 IDQARNK|QM 0.072 . ____________________________^_________________

  • Fasta :-

    >EDI_220380 ATGTATATGCAAAATTATACATTGTATGGATCATTAAGACCATTTGGATGTAGTTTATTA ATAGGAGGAGTTGATCAACATGGATATTCCCTTCATTACATTGAACCATCAGGAACAACA TATGGATATTTTGCTAATGGAATTGGTAAAGGAAAACAAATATGTAAAAATGAGTTAGAA AAAATAAATTTCTCACAAATCACATGTGAAGAGGCATTAATTAAACTTGTAGAAATTATT GATTTATGTCATAGTGAATGGAAAGACAAACCATATGAGATTGAATTAAGTTGGATCTCG GAAAAGACTAATAACATAGTTAAGAAAGTTGATAAAGAAATGAAACAAAAAATTATTGAC CAAGCTCGTAATAAACAAATGCATCAGAACTAA
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  • Fasta :-

    MYMQNYTLYGSLRPFGCSLLIGGVDQHGYSLHYIEPSGTTYGYFANGIGKGKQICKNELE KINFSQITCEEALIKLVEIIDLCHSEWKDKPYEIELSWISEKTNNIVKKVDKEMKQKIID QARNKQMHQN

    No Results
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EDI_220380      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India