EDI_221540 | chaperone Clpb, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0019538      

  • Computed_GO_Processes:  protein metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_221540OTHER0.9999930.0000040.000003
No Results

  • Fasta :-

    >EDI_221540 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKL KKEIKETMNKIAVQNPPPVDIGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEEKE ISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYEALKKYGNDLTAQAESGKMDPII GRDEEIKRVIRILS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_221540.fa Sequence name : EDI_221540 Sequence length : 194 VALUES OF COMPUTED PARAMETERS Coef20 : 3.362 CoefTot : 0.000 ChDiff : -3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.218 1.100 -0.130 0.446 MesoH : -1.498 -0.086 -0.659 0.078 MuHd_075 : 6.948 6.747 1.353 0.987 MuHd_095 : 26.723 9.083 6.318 4.329 MuHd_100 : 34.762 11.217 8.878 5.193 MuHd_105 : 40.299 13.996 10.479 5.744 Hmax_075 : -8.633 -2.333 -5.726 0.050 Hmax_095 : -0.787 -2.538 -3.819 1.208 Hmax_100 : 11.800 -0.000 -1.048 2.490 Hmax_105 : 11.800 1.050 -0.202 2.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9419 0.0581 DFMC : 0.9281 0.0719
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 194 EDI_221540 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKLKKEIKETMNKIAVQNPPPVD 80 IGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEEKEISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYEAL 160 KKYGNDLTAQAESGKMDPIIGRDEEIKRVIRILS 240 ................................................................................ 80 ................................................................................ 160 .................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_221540 5 --MDPNK|WT 0.079 . EDI_221540 15 ATVQMFK|ES 0.059 . EDI_221540 24 QEIAFER|KN 0.098 . EDI_221540 25 EIAFERK|NA 0.097 . EDI_221540 48 ESNIVIR|IV 0.202 . EDI_221540 59 MGGDVNK|LK 0.069 . EDI_221540 61 GDVNKLK|KE 0.069 . EDI_221540 62 DVNKLKK|EI 0.101 . EDI_221540 65 KLKKEIK|ET 0.071 . EDI_221540 70 IKETMNK|IA 0.065 . EDI_221540 92 TTQQVLR|RA 0.127 . EDI_221540 93 TQQVLRR|AI 0.348 . EDI_221540 97 LRRAIEK|QK 0.073 . EDI_221540 99 RAIEKQK|RM 0.071 . EDI_221540 100 AIEKQKR|MG 0.185 . EDI_221540 119 MSLMEEK|EI 0.076 . EDI_221540 133 NSGINVK|EF 0.068 . EDI_221540 137 NVKEFNK|KI 0.064 . EDI_221540 138 VKEFNKK|IT 0.116 . EDI_221540 143 KKITEMR|KG 0.096 . EDI_221540 144 KITEMRK|GQ 0.084 . EDI_221540 151 GQSVETK|EA 0.108 . EDI_221540 161 SQYEALK|KY 0.070 . EDI_221540 162 QYEALKK|YG 0.111 . EDI_221540 175 AQAESGK|MD 0.069 . EDI_221540 182 MDPIIGR|DE 0.107 . EDI_221540 187 GRDEEIK|RV 0.085 . EDI_221540 188 RDEEIKR|VI 0.122 . EDI_221540 191 EIKRVIR|IL 0.241 . ____________________________^_________________

  • Fasta :-

    >EDI_221540 ATGGACCCAAACAAATGGACAGATGCAACTGTTCAAATGTTCAAAGAATCACAAGAAATA GCATTTGAAAGAAAAAATGCATACATTATGCCAATTCATATGATGGAAGCAATTGTTGAA GAAGAATCAAATATTGTTATCCGAATAGTTGAAATGATGGGAGGTGATGTTAATAAATTA AAGAAAGAAATAAAAGAAACAATGAATAAAATCGCAGTTCAAAATCCACCACCAGTTGAT ATTGGACTTCATCCAACAACACAACAAGTATTAAGAAGAGCAATAGAGAAACAAAAAAGA ATGGGAGACTCATATCTTGCAATAGATGTAATTGTAATGTCATTAATGGAAGAGAAAGAA ATTAGTACAATAGTAGGAAATAGTGGAATTAATGTGAAAGAATTTAACAAAAAAATAACA GAAATGAGAAAAGGACAAAGTGTAGAAACAAAAGAAGCAGAAAGTCAATATGAAGCATTA AAGAAATATGGAAATGATTTAACAGCACAAGCAGAAAGTGGAAAGATGGATCCAATTATT GGAAGAGATGAAGAAATTAAACGAGTTATTCGTATTTTATCAA
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  • Fasta :-

    MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKL KKEIKETMNKIAVQNPPPVDIGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEEKE ISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYEALKKYGNDLTAQAESGKMDPII GRDEEIKRVIRILS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_221540155 SKEAESQYEA0.997unspEDI_221540173 SAQAESGKMD0.994unsp

EDI_221540      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India