EDI_223400 | chaperone Clpb, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:  GO:0019538      

  • Computed_GO_Processes:  protein metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_223400OTHER0.9999940.0000030.000003
No Results

  • Fasta :-

    >EDI_223400 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKL KKEIKETMNKIPVQNPPPVDIGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEEKE ISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYEALKKYGNDLTAQAESGKMDPII GRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNLQCRVIGLDM GALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAANILKP MLSRGELRCIGATTLEEYRKYVEKDPAFE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_223400.fa Sequence name : EDI_223400 Sequence length : 329 VALUES OF COMPUTED PARAMETERS Coef20 : 3.362 CoefTot : 0.000 ChDiff : -2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.682 1.506 0.052 0.654 MesoH : -0.990 0.361 -0.444 0.208 MuHd_075 : 6.948 6.747 1.353 0.987 MuHd_095 : 26.723 9.083 6.318 4.329 MuHd_100 : 34.762 11.217 8.878 5.193 MuHd_105 : 40.299 13.996 10.479 5.744 Hmax_075 : -8.633 -2.333 -5.726 0.050 Hmax_095 : -0.787 -2.538 -3.819 1.208 Hmax_100 : 11.800 -0.000 -1.048 2.490 Hmax_105 : 11.800 1.050 -0.202 2.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9146 0.0854 DFMC : 0.9207 0.0793
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 329 EDI_223400 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKLKKEIKETMNKIPVQNPPPVD 80 IGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEEKEISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYEAL 160 KKYGNDLTAQAESGKMDPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNLQCRVIGLDM 240 GALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAANILKPMLSRGELRCIGATTLEEYRK 320 YVEKDPAFE 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_223400 5 --MDPNK|WT 0.079 . EDI_223400 15 ATVQMFK|ES 0.059 . EDI_223400 24 QEIAFER|KN 0.098 . EDI_223400 25 EIAFERK|NA 0.097 . EDI_223400 48 ESNIVIR|IV 0.202 . EDI_223400 59 MGGDVNK|LK 0.069 . EDI_223400 61 GDVNKLK|KE 0.069 . EDI_223400 62 DVNKLKK|EI 0.101 . EDI_223400 65 KLKKEIK|ET 0.074 . EDI_223400 70 IKETMNK|IP 0.057 . EDI_223400 92 TTQQVLR|RA 0.127 . EDI_223400 93 TQQVLRR|AI 0.348 . EDI_223400 97 LRRAIEK|QK 0.073 . EDI_223400 99 RAIEKQK|RM 0.071 . EDI_223400 100 AIEKQKR|MG 0.185 . EDI_223400 119 MSLMEEK|EI 0.076 . EDI_223400 133 NSGINVK|EF 0.068 . EDI_223400 137 NVKEFNK|KI 0.064 . EDI_223400 138 VKEFNKK|IT 0.116 . EDI_223400 143 KKITEMR|KG 0.096 . EDI_223400 144 KITEMRK|GQ 0.084 . EDI_223400 151 GQSVETK|EA 0.108 . EDI_223400 161 SQYEALK|KY 0.070 . EDI_223400 162 QYEALKK|YG 0.111 . EDI_223400 175 AQAESGK|MD 0.069 . EDI_223400 182 MDPIIGR|DE 0.107 . EDI_223400 187 GRDEEIK|RV 0.080 . EDI_223400 188 RDEEIKR|VI 0.121 . EDI_223400 191 EIKRVIR|IL 0.192 . EDI_223400 195 VIRILSR|RT 0.071 . EDI_223400 196 IRILSRR|TK 0.116 . EDI_223400 198 ILSRRTK|NN 0.135 . EDI_223400 211 GEPGVGK|TA 0.064 . EDI_223400 221 VEGLAQR|IV 0.098 . EDI_223400 224 LAQRIVK|GD 0.141 . EDI_223400 234 PSNLQCR|VI 0.106 . EDI_223400 250 IAGAQYR|GQ 0.110 . EDI_223400 256 RGQFEER|LK 0.083 . EDI_223400 258 QFEERLK|AV 0.076 . EDI_223400 262 RLKAVIK|EV 0.076 . EDI_223400 265 AVIKEVK|ES 0.056 . EDI_223400 268 KEVKESK|IP 0.061 . EDI_223400 299 DAANILK|PM 0.057 . EDI_223400 304 LKPMLSR|GE 0.080 . EDI_223400 308 LSRGELR|CI 0.133 . EDI_223400 319 TTLEEYR|KY 0.074 . EDI_223400 320 TLEEYRK|YV 0.140 . EDI_223400 324 YRKYVEK|DP 0.075 . ____________________________^_________________

  • Fasta :-

    >EDI_223400 ATGGACCCAAACAAATGGACAGATGCAACTGTTCAAATGTTCAAAGAATCACAAGAAATA GCATTTGAAAGAAAAAATGCATACATTATGCCAATTCATATGATGGAAGCAATTGTTGAA GAAGAATCAAATATTGTTATCCGAATAGTTGAAATGATGGGAGGTGATGTTAATAAATTA AAGAAAGAAATAAAAGAAACAATGAATAAAATTCCAGTTCAAAATCCACCACCAGTTGAT ATTGGACTTCATCCAACAACACAACAAGTATTAAGAAGAGCAATAGAGAAACAAAAAAGA ATGGGAGACTCATATCTTGCAATAGATGTAATTGTAATGTCATTAATGGAAGAGAAAGAA ATTAGTACAATAGTAGGAAATAGTGGAATTAATGTGAAAGAATTTAACAAAAAAATAACA GAAATGAGAAAAGGACAAAGTGTAGAAACAAAAGAAGCAGAAAGTCAGTATGAAGCATTA AAGAAATATGGAAATGATTTAACAGCACAAGCAGAAAGCGGAAAGATGGATCCAATTATT GGAAGAGATGAAGAAATTAAACGAGTTATTCGTATTTTATCAAGAAGAACAAAAAATAAT CCAGTATTAATAGGAGAACCAGGAGTAGGTAAAACAGCAGTAGTTGAAGGACTTGCACAA CGAATAGTTAAAGGAGATGTTCCAAGTAATTTACAATGTCGAGTTATTGGATTAGATATG GGAGCATTAATAGCAGGAGCACAATATAGAGGACAATTTGAAGAAAGATTAAAAGCAGTA ATAAAAGAAGTTAAAGAAAGTAAAATACCTATTATATTATTTATAGATGAAATTCATACA GTATTAGGAGCAGGAGCAACAGGAGAAGGAGCAATGGATGCAGCTAATATTTTAAAACCA ATGTTATCAAGAGGAGAATTACGATGTATTGGAGCAACAACATTAGAAGAATATAGAAAA TATGTAGAAAAAGATCCAGCATTTGAAAG
  • Download Fasta

  • Fasta :-

    MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKL KKEIKETMNKIPVQNPPPVDIGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEEKE ISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYEALKKYGNDLTAQAESGKMDPII GRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNLQCRVIGLDM GALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAANILKP MLSRGELRCIGATTLEEYRKYVEKDPAFE

  • title: ATP binding site
  • coordinates: E206,P207,G208,V209,G210,K211,T212,A213,D276,T314
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_223400155 SKEAESQYEA0.997unspEDI_223400173 SAQAESGKMD0.994unsp

EDI_223400      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India