EDI_233520 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
EDI_233520OTHER0.9999770.0000150.000007
No Results

  • Fasta :-

    >EDI_233520 MTLSDTTDERKRENKKEYEYFQPVSETERIWPMLNSLVNLIDINQFRSEYALTLLECINQ VNKQVISSYPFIGRIEVFLFQKIFNCSQVNFYDSSLFGLAELLLFFLHCKVDKEVVEVFQ KRSNEIFDMMYGFNQNYISIDEVRKVYVSILVMFPLWEWNRLLVHSIEIPSNINSIEFIN QNVPFIGLENIGNTCYINSSLQLLYMCSSFRKNVLSSSTSLGSIFKKLNEQQSYLELNKA IIESVCGHNIIIGEQNDASLFINDVLDVYKTQTNQSPFLVKTTTKMKCLNCLKEREKTED SYSLSVGTEKSISESVNKYYGVVNNMILDCEECHIKGPHQVKFFSETTNDFLISINRVTS ELKKNDDFIEIESEICGFQFIGAIIHRGSYTCGHYTTVALGYDNNWYWFNDKVVNVISKE QVKRMCCGGIEGDWNASVLLYTKNTEMIPPSPQRSYCFNQMIKKYIINSPLFEQILKRCI EGISCLSEEEQKIFINKYATVIDKIPPSDPSRIILLETVAMKSKLFDEEIQSLKLTRKYI MTGEEKELLFSLITIKEPKNLYIQQIIWLVVSTFGDKLPSVLPSLYQRVIDILYCIDGDK IELNFSSITDFISISTPLQRSYSESSLFHNMISLMLYDLNNIQYSSMIIEITRKLIMTLF PCIVSYPLSIKYHIMIIKRYFGTASEEIKYNYLAILIDSSCSWKKISCLVDEVLEILYQI PLSSECCNKLIKRYESNKKYIEPSLSQSFDLFFTTQESFRDV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_233520.fa Sequence name : EDI_233520 Sequence length : 762 VALUES OF COMPUTED PARAMETERS Coef20 : 3.264 CoefTot : 0.234 ChDiff : -14 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.288 1.641 0.192 0.633 MesoH : 0.011 0.640 -0.239 0.305 MuHd_075 : 5.205 3.723 2.263 3.177 MuHd_095 : 22.823 7.783 5.479 2.771 MuHd_100 : 20.617 7.033 4.969 2.950 MuHd_105 : 16.692 6.566 3.983 2.536 Hmax_075 : -27.213 -12.162 -8.632 -1.940 Hmax_095 : -17.150 -9.712 -6.292 -2.459 Hmax_100 : -18.500 -10.300 -7.108 -2.650 Hmax_105 : -17.300 -9.917 -7.739 -2.310 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9861 0.0139 DFMC : 0.9756 0.0244
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 762 EDI_233520 MTLSDTTDERKRENKKEYEYFQPVSETERIWPMLNSLVNLIDINQFRSEYALTLLECINQVNKQVISSYPFIGRIEVFLF 80 QKIFNCSQVNFYDSSLFGLAELLLFFLHCKVDKEVVEVFQKRSNEIFDMMYGFNQNYISIDEVRKVYVSILVMFPLWEWN 160 RLLVHSIEIPSNINSIEFINQNVPFIGLENIGNTCYINSSLQLLYMCSSFRKNVLSSSTSLGSIFKKLNEQQSYLELNKA 240 IIESVCGHNIIIGEQNDASLFINDVLDVYKTQTNQSPFLVKTTTKMKCLNCLKEREKTEDSYSLSVGTEKSISESVNKYY 320 GVVNNMILDCEECHIKGPHQVKFFSETTNDFLISINRVTSELKKNDDFIEIESEICGFQFIGAIIHRGSYTCGHYTTVAL 400 GYDNNWYWFNDKVVNVISKEQVKRMCCGGIEGDWNASVLLYTKNTEMIPPSPQRSYCFNQMIKKYIINSPLFEQILKRCI 480 EGISCLSEEEQKIFINKYATVIDKIPPSDPSRIILLETVAMKSKLFDEEIQSLKLTRKYIMTGEEKELLFSLITIKEPKN 560 LYIQQIIWLVVSTFGDKLPSVLPSLYQRVIDILYCIDGDKIELNFSSITDFISISTPLQRSYSESSLFHNMISLMLYDLN 640 NIQYSSMIIEITRKLIMTLFPCIVSYPLSIKYHIMIIKRYFGTASEEIKYNYLAILIDSSCSWKKISCLVDEVLEILYQI 720 PLSSECCNKLIKRYESNKKYIEPSLSQSFDLFFTTQESFRDV 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .......................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_233520 10 SDTTDER|KR 0.074 . EDI_233520 11 DTTDERK|RE 0.068 . EDI_233520 12 TTDERKR|EN 0.161 . EDI_233520 15 ERKRENK|KE 0.127 . EDI_233520 16 RKRENKK|EY 0.118 . EDI_233520 29 PVSETER|IW 0.078 . EDI_233520 47 IDINQFR|SE 0.124 . EDI_233520 63 CINQVNK|QV 0.081 . EDI_233520 74 SYPFIGR|IE 0.065 . EDI_233520 82 EVFLFQK|IF 0.059 . EDI_233520 110 LFFLHCK|VD 0.059 . EDI_233520 113 LHCKVDK|EV 0.079 . EDI_233520 121 VVEVFQK|RS 0.064 . EDI_233520 122 VEVFQKR|SN 0.316 . EDI_233520 144 ISIDEVR|KV 0.124 . EDI_233520 145 SIDEVRK|VY 0.079 . EDI_233520 161 PLWEWNR|LL 0.077 . EDI_233520 211 YMCSSFR|KN 0.073 . EDI_233520 212 MCSSFRK|NV 0.117 . EDI_233520 226 SLGSIFK|KL 0.067 . EDI_233520 227 LGSIFKK|LN 0.140 . EDI_233520 239 SYLELNK|AI 0.064 . EDI_233520 270 DVLDVYK|TQ 0.057 . EDI_233520 281 QSPFLVK|TT 0.064 . EDI_233520 285 LVKTTTK|MK 0.056 . EDI_233520 287 KTTTKMK|CL 0.059 . EDI_233520 293 KCLNCLK|ER 0.060 . EDI_233520 295 LNCLKER|EK 0.079 . EDI_233520 297 CLKEREK|TE 0.058 . EDI_233520 310 LSVGTEK|SI 0.094 . EDI_233520 318 ISESVNK|YY 0.092 . EDI_233520 336 CEECHIK|GP 0.068 . EDI_233520 342 KGPHQVK|FF 0.085 . EDI_233520 357 FLISINR|VT 0.076 . EDI_233520 363 RVTSELK|KN 0.061 . EDI_233520 364 VTSELKK|ND 0.106 . EDI_233520 387 IGAIIHR|GS 0.109 . EDI_233520 412 WYWFNDK|VV 0.066 . EDI_233520 419 VVNVISK|EQ 0.059 . EDI_233520 423 ISKEQVK|RM 0.063 . EDI_233520 424 SKEQVKR|MC 0.308 . EDI_233520 443 SVLLYTK|NT 0.063 . EDI_233520 454 IPPSPQR|SY 0.143 . EDI_233520 463 CFNQMIK|KY 0.059 . EDI_233520 464 FNQMIKK|YI 0.114 . EDI_233520 477 LFEQILK|RC 0.059 . EDI_233520 478 FEQILKR|CI 0.213 . EDI_233520 492 LSEEEQK|IF 0.062 . EDI_233520 497 QKIFINK|YA 0.084 . EDI_233520 504 YATVIDK|IP 0.053 . EDI_233520 512 PPSDPSR|II 0.097 . EDI_233520 522 LETVAMK|SK 0.068 . EDI_233520 524 TVAMKSK|LF 0.073 . EDI_233520 534 EEIQSLK|LT 0.065 . EDI_233520 537 QSLKLTR|KY 0.085 . EDI_233520 538 SLKLTRK|YI 0.146 . EDI_233520 546 IMTGEEK|EL 0.058 . EDI_233520 556 FSLITIK|EP 0.054 . EDI_233520 559 ITIKEPK|NL 0.073 . EDI_233520 577 VSTFGDK|LP 0.054 . EDI_233520 588 LPSLYQR|VI 0.107 . EDI_233520 600 YCIDGDK|IE 0.050 . EDI_233520 620 ISTPLQR|SY 0.124 . EDI_233520 653 MIIEITR|KL 0.079 . EDI_233520 654 IIEITRK|LI 0.082 . EDI_233520 671 SYPLSIK|YH 0.064 . EDI_233520 678 YHIMIIK|RY 0.059 . EDI_233520 679 HIMIIKR|YF 0.255 . EDI_233520 689 TASEEIK|YN 0.074 . EDI_233520 704 DSSCSWK|KI 0.079 . EDI_233520 705 SSCSWKK|IS 0.097 . EDI_233520 729 SSECCNK|LI 0.073 . EDI_233520 732 CCNKLIK|RY 0.061 . EDI_233520 733 CNKLIKR|YE 0.172 . EDI_233520 738 KRYESNK|KY 0.062 . EDI_233520 739 RYESNKK|YI 0.157 . EDI_233520 760 TTQESFR|DV 0.219 . ____________________________^_________________

  • Fasta :-

    >EDI_233520 ATGACTCTTTCAGATACTACTGATGAAAGAAAAAGAGAAAATAAAAAGGAGTATGAATAT TTCCAACCTGTTTCTGAGACAGAAAGAATTTGGCCCATGTTAAATTCTTTAGTTAATTTA ATTGATATTAATCAGTTTAGAAGTGAGTACGCATTAACGTTATTAGAATGTATTAATCAA GTTAATAAACAGGTTATTTCATCATATCCATTTATTGGTAGAATTGAAGTATTTTTATTC CAAAAAATTTTTAATTGCTCACAGGTAAATTTTTATGACAGTTCATTATTTGGTCTAGCT GAACTTCTTCTATTTTTTCTCCATTGTAAAGTAGATAAGGAAGTAGTTGAAGTGTTTCAA AAAAGAAGTAACGAAATATTTGACATGATGTATGGATTTAATCAAAACTATATTTCTATT GATGAAGTAAGAAAGGTATATGTAAGTATTCTTGTTATGTTTCCATTATGGGAATGGAAT AGGTTATTAGTTCATTCAATAGAAATACCATCAAATATTAATTCAATTGAATTTATAAAT CAAAATGTTCCATTTATAGGATTGGAAAATATTGGAAATACTTGTTATATCAATTCTAGT CTTCAATTACTTTATATGTGTAGCTCTTTTAGGAAAAATGTACTATCCTCATCTACATCA CTTGGATCTATATTTAAGAAATTAAATGAACAACAGAGTTATTTGGAATTGAATAAAGCT ATCATTGAAAGTGTTTGTGGTCATAACATTATTATTGGGGAACAAAATGATGCTTCTCTA TTTATTAATGATGTTTTAGATGTTTATAAAACTCAAACAAACCAAAGCCCATTTCTAGTT AAAACAACAACTAAAATGAAATGTTTAAATTGTCTAAAAGAGAGGGAAAAAACAGAAGAT TCATATTCGTTAAGTGTAGGAACAGAAAAGAGTATTAGTGAAAGTGTAAATAAATATTAT GGTGTTGTTAATAATATGATATTAGACTGTGAAGAATGTCATATAAAAGGACCACATCAA GTTAAATTCTTCAGTGAAACAACAAATGATTTTTTAATTTCTATTAATAGAGTTACTTCA GAACTAAAAAAGAATGATGATTTCATTGAAATAGAATCAGAAATATGCGGATTCCAGTTT ATTGGAGCAATTATTCATAGAGGAAGTTATACGTGTGGGCATTATACTACAGTTGCATTA GGGTATGACAATAATTGGTATTGGTTTAATGATAAAGTTGTTAATGTTATTAGTAAGGAA CAAGTAAAGAGAATGTGTTGTGGAGGGATTGAGGGTGATTGGAATGCTTCAGTCCTTCTC TATACTAAAAATACAGAAATGATACCACCATCACCTCAAAGAAGTTATTGTTTTAATCAA ATGATAAAGAAATATATAATAAATTCTCCTCTTTTTGAACAAATATTAAAAAGGTGTATA GAAGGTATTTCATGTTTATCTGAGGAAGAACAAAAAATTTTTATCAATAAATATGCAACG GTGATTGATAAAATACCTCCTTCAGATCCATCACGAATAATTCTTTTAGAAACAGTCGCA ATGAAATCAAAATTATTTGATGAAGAGATTCAATCATTAAAATTAACACGAAAATACATT ATGACTGGAGAGGAAAAAGAGTTACTTTTTTCATTAATAACAATTAAAGAACCTAAAAAT TTATATATTCAACAAATAATATGGTTAGTTGTTTCAACGTTTGGAGATAAACTACCTTCA GTATTACCTAGTTTATATCAGAGAGTAATTGATATATTATATTGTATTGATGGTGATAAA ATAGAATTAAACTTTAGTAGCATTACTGATTTTATTTCAATCTCAACGCCTTTACAAAGG TCTTATTCTGAATCTTCATTATTCCACAATATGATATCTTTAATGTTGTATGACCTTAAC AATATTCAATATTCATCAATGATAATAGAAATAACAAGAAAACTAATAATGACTCTTTTC CCATGTATTGTTAGTTATCCTTTATCAATCAAATATCATATAATGATTATAAAACGTTAT TTTGGAACAGCTTCAGAAGAAATAAAATACAATTACTTAGCTATACTCATAGATTCATCT TGTTCATGGAAAAAAATTTCATGCCTTGTAGATGAGGTATTAGAAATTTTATATCAAATC CCACTTTCTTCTGAGTGTTGCAATAAATTAATAAAGAGATATGAATCAAATAAAAAGTAC ATAGAACCTTCCTTGTCACAAAGTTTTGATTTGTTTTTTACTACACAAGAATCTTTTCGT GATGTTTAA
  • Download Fasta

  • Fasta :-

    MTLSDTTDERKRENKKEYEYFQPVSETERIWPMLNSLVNLIDINQFRSEYALTLLECINQ VNKQVISSYPFIGRIEVFLFQKIFNCSQVNFYDSSLFGLAELLLFFLHCKVDKEVVEVFQ KRSNEIFDMMYGFNQNYISIDEVRKVYVSILVMFPLWEWNRLLVHSIEIPSNINSIEFIN QNVPFIGLENIGNTCYINSSLQLLYMCSSFRKNVLSSSTSLGSIFKKLNEQQSYLELNKA IIESVCGHNIIIGEQNDASLFINDVLDVYKTQTNQSPFLVKTTTKMKCLNCLKEREKTED SYSLSVGTEKSISESVNKYYGVVNNMILDCEECHIKGPHQVKFFSETTNDFLISINRVTS ELKKNDDFIEIESEICGFQFIGAIIHRGSYTCGHYTTVALGYDNNWYWFNDKVVNVISKE QVKRMCCGGIEGDWNASVLLYTKNTEMIPPSPQRSYCFNQMIKKYIINSPLFEQILKRCI EGISCLSEEEQKIFINKYATVIDKIPPSDPSRIILLETVAMKSKLFDEEIQSLKLTRKYI MTGEEKELLFSLITIKEPKNLYIQQIIWLVVSTFGDKLPSVLPSLYQRVIDILYCIDGDK IELNFSSITDFISISTPLQRSYSESSLFHNMISLMLYDLNNIQYSSMIIEITRKLIMTLF PCIVSYPLSIKYHIMIIKRYFGTASEEIKYNYLAILIDSSCSWKKISCLVDEVLEILYQI PLSSECCNKLIKRYESNKKYIEPSLSQSFDLFFTTQESFRDV

  • title: Active Site
  • coordinates: N190,C195,H394,D411
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_233520621 SPLQRSYSES0.995unspEDI_233520621 SPLQRSYSES0.995unspEDI_233520621 SPLQRSYSES0.995unspEDI_233520736 SKRYESNKKY0.996unspEDI_233520389 SIHRGSYTCG0.99unspEDI_233520487 SISCLSEEEQ0.996unsp

EDI_233520      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India