EDI_238810 | antigenic protein NP1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_238810OTHER0.9056300.0893050.005065
No Results

  • Fasta :-

    >EDI_238810 MLGTKGIIAIVAIASAIVTGVIIIVVVVTLSVVLTRDNVEETNLVDISDIITNDPQMTNE MDTLEVISSSKFSGTKPKEWQMKYTKYPYWRCGLTFTNEEKQNIIDENKEYMNSLLELIK SGSLGRMPEKFGGEKQFEADEVNWNADRLEVRYGVFGRVFGQRAVAWAFPGEVVTIKFPK GMSYKGVQVSIGKCNHNPSDQWLDNISRWSNDRMPIDSIGFDLGKNTTESYIINDTFKIG SPFGGMVYLRLDATFTNSFYVTFSNVGRAPIINYNITTNEEWNSVLKNAPGNVAEIRTPG NRLVFTSRHIRNLEDAQYISDYWLKAISISNYAVTLENIPITLNFDQRVDAGAAVAFVGR WFTQHPSDWASGCVNKEGLINSGNWGPLHEMNHHMQGTYLRGGNWGIKEPGEETNNVMTS INYILYTNIAGHRNQGLSGWNYVSDGYSTIYKILNGENDQPHLRSYVNIAHAFGTDTLIA LVKSYYGLWYENNYEGEYSIKRDSTSAFCLLAAIATKRDTRYLCSLFKYDIQQNVSEAIK NMNYPTYYPFFNVYAMSYNGNYYGRTYKIPYGTTRLNFTATTAIDPSATSVSYTIKSGLT KGKLEQVEENVYDYTPNFGADENDTFVLNIDCIVNGEKVHIEQDGTFELDPHQVEYEVYK DVKTKDMEQALNTIQNKTSNYTGTSTFFGIGNYDDGTMQSMLVEKGKLIVPTSGYYTLFM KADDLGRLLLNVNGEYEQLLNVKTYLGGYSKTINGTYATVKLEKDTEYPFILYNLNTGGQ GFIRIGYCYQGTDQSSVNVSKCSVLDIGSSMILNEKVKAGAKEPEFQIPPIKYSRPTRFL TNAYRTIPKCLNGDDDCSIKCISLPLKQDDSNKCSNMFDDNYSTMYHSRWTGGGTTFPVN YTFEFPENVTFNNLYIHHRRPQDSWGYFEIFIKSPETGEMKLLEEYNHQQSTTTEIDFQD LITTDSVQFIVYNNSNGGNYVNVVELSFNIKESFKNYTNSFGPNIKSQGFKKVITPGASG GYLAVNEHEGKGSLCFKAKVTKFGLYGFRKPTSGKFRVTIDSQQGEVTSQSYFSDSERTL FYTHTFDETEANKVHDICVDVVEGTINLDIIGSS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_238810.fa Sequence name : EDI_238810 Sequence length : 1114 VALUES OF COMPUTED PARAMETERS Coef20 : 4.364 CoefTot : 0.426 ChDiff : -24 ZoneTo : 36 KR : 2 DE : 0 CleavSite : 38 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.353 3.106 0.599 0.942 MesoH : -0.242 0.876 -0.223 0.334 MuHd_075 : 17.804 22.760 6.556 6.384 MuHd_095 : 14.307 15.414 4.838 4.360 MuHd_100 : 15.851 18.779 5.836 5.367 MuHd_105 : 16.313 18.400 5.920 5.650 Hmax_075 : 19.700 28.500 5.843 8.720 Hmax_095 : 18.200 28.350 5.034 7.788 Hmax_100 : 18.700 27.900 5.343 8.120 Hmax_105 : 17.600 23.800 5.032 7.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9307 0.0693 DFMC : 0.9543 0.0457
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1114 EDI_238810 MLGTKGIIAIVAIASAIVTGVIIIVVVVTLSVVLTRDNVEETNLVDISDIITNDPQMTNEMDTLEVISSSKFSGTKPKEW 80 QMKYTKYPYWRCGLTFTNEEKQNIIDENKEYMNSLLELIKSGSLGRMPEKFGGEKQFEADEVNWNADRLEVRYGVFGRVF 160 GQRAVAWAFPGEVVTIKFPKGMSYKGVQVSIGKCNHNPSDQWLDNISRWSNDRMPIDSIGFDLGKNTTESYIINDTFKIG 240 SPFGGMVYLRLDATFTNSFYVTFSNVGRAPIINYNITTNEEWNSVLKNAPGNVAEIRTPGNRLVFTSRHIRNLEDAQYIS 320 DYWLKAISISNYAVTLENIPITLNFDQRVDAGAAVAFVGRWFTQHPSDWASGCVNKEGLINSGNWGPLHEMNHHMQGTYL 400 RGGNWGIKEPGEETNNVMTSINYILYTNIAGHRNQGLSGWNYVSDGYSTIYKILNGENDQPHLRSYVNIAHAFGTDTLIA 480 LVKSYYGLWYENNYEGEYSIKRDSTSAFCLLAAIATKRDTRYLCSLFKYDIQQNVSEAIKNMNYPTYYPFFNVYAMSYNG 560 NYYGRTYKIPYGTTRLNFTATTAIDPSATSVSYTIKSGLTKGKLEQVEENVYDYTPNFGADENDTFVLNIDCIVNGEKVH 640 IEQDGTFELDPHQVEYEVYKDVKTKDMEQALNTIQNKTSNYTGTSTFFGIGNYDDGTMQSMLVEKGKLIVPTSGYYTLFM 720 KADDLGRLLLNVNGEYEQLLNVKTYLGGYSKTINGTYATVKLEKDTEYPFILYNLNTGGQGFIRIGYCYQGTDQSSVNVS 800 KCSVLDIGSSMILNEKVKAGAKEPEFQIPPIKYSRPTRFLTNAYRTIPKCLNGDDDCSIKCISLPLKQDDSNKCSNMFDD 880 NYSTMYHSRWTGGGTTFPVNYTFEFPENVTFNNLYIHHRRPQDSWGYFEIFIKSPETGEMKLLEEYNHQQSTTTEIDFQD 960 LITTDSVQFIVYNNSNGGNYVNVVELSFNIKESFKNYTNSFGPNIKSQGFKKVITPGASGGYLAVNEHEGKGSLCFKAKV 1040 TKFGLYGFRKPTSGKFRVTIDSQQGEVTSQSYFSDSERTLFYTHTFDETEANKVHDICVDVVEGTINLDIIGSS 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 .......................................................................... 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_238810 5 --MLGTK|GI 0.068 . EDI_238810 36 LSVVLTR|DN 0.104 . EDI_238810 71 EVISSSK|FS 0.075 . EDI_238810 76 SKFSGTK|PK 0.069 . EDI_238810 78 FSGTKPK|EW 0.074 . EDI_238810 83 PKEWQMK|YT 0.071 . EDI_238810 86 WQMKYTK|YP 0.060 . EDI_238810 91 TKYPYWR|CG 0.096 . EDI_238810 101 TFTNEEK|QN 0.065 . EDI_238810 109 NIIDENK|EY 0.061 . EDI_238810 120 SLLELIK|SG 0.075 . EDI_238810 126 KSGSLGR|MP 0.101 . EDI_238810 130 LGRMPEK|FG 0.081 . EDI_238810 135 EKFGGEK|QF 0.066 . EDI_238810 148 VNWNADR|LE 0.067 . EDI_238810 152 ADRLEVR|YG 0.087 . EDI_238810 158 RYGVFGR|VF 0.112 . EDI_238810 163 GRVFGQR|AV 0.209 . EDI_238810 177 GEVVTIK|FP 0.060 . EDI_238810 180 VTIKFPK|GM 0.084 . EDI_238810 185 PKGMSYK|GV 0.100 . EDI_238810 193 VQVSIGK|CN 0.058 . EDI_238810 208 WLDNISR|WS 0.079 . EDI_238810 213 SRWSNDR|MP 0.101 . EDI_238810 225 IGFDLGK|NT 0.060 . EDI_238810 238 IINDTFK|IG 0.079 . EDI_238810 250 GGMVYLR|LD 0.085 . EDI_238810 268 TFSNVGR|AP 0.106 . EDI_238810 287 EWNSVLK|NA 0.065 . EDI_238810 297 GNVAEIR|TP 0.099 . EDI_238810 302 IRTPGNR|LV 0.137 . EDI_238810 308 RLVFTSR|HI 0.110 . EDI_238810 311 FTSRHIR|NL 0.439 . EDI_238810 325 ISDYWLK|AI 0.073 . EDI_238810 348 TLNFDQR|VD 0.096 . EDI_238810 360 AVAFVGR|WF 0.115 . EDI_238810 376 ASGCVNK|EG 0.057 . EDI_238810 401 MQGTYLR|GG 0.107 . EDI_238810 408 GGNWGIK|EP 0.068 . EDI_238810 433 TNIAGHR|NQ 0.096 . EDI_238810 452 GYSTIYK|IL 0.076 . EDI_238810 464 NDQPHLR|SY 0.135 . EDI_238810 483 TLIALVK|SY 0.073 . EDI_238810 501 EGEYSIK|RD 0.064 . EDI_238810 502 GEYSIKR|DS 0.200 . EDI_238810 517 LAAIATK|RD 0.063 . EDI_238810 518 AAIATKR|DT 0.191 . EDI_238810 521 ATKRDTR|YL 0.223 . EDI_238810 528 YLCSLFK|YD 0.068 . EDI_238810 540 NVSEAIK|NM 0.055 . EDI_238810 565 NGNYYGR|TY 0.090 . EDI_238810 568 YYGRTYK|IP 0.095 . EDI_238810 575 IPYGTTR|LN 0.107 . EDI_238810 596 SVSYTIK|SG 0.091 . EDI_238810 601 IKSGLTK|GK 0.071 . EDI_238810 603 SGLTKGK|LE 0.068 . EDI_238810 638 CIVNGEK|VH 0.057 . EDI_238810 660 VEYEVYK|DV 0.108 . EDI_238810 663 EVYKDVK|TK 0.061 . EDI_238810 665 YKDVKTK|DM 0.128 . EDI_238810 677 LNTIQNK|TS 0.062 . EDI_238810 705 QSMLVEK|GK 0.070 . EDI_238810 707 MLVEKGK|LI 0.068 . EDI_238810 721 YYTLFMK|AD 0.060 . EDI_238810 727 KADDLGR|LL 0.073 . EDI_238810 743 EQLLNVK|TY 0.056 . EDI_238810 751 YLGGYSK|TI 0.061 . EDI_238810 761 GTYATVK|LE 0.061 . EDI_238810 764 ATVKLEK|DT 0.069 . EDI_238810 784 GGQGFIR|IG 0.100 . EDI_238810 801 SSVNVSK|CS 0.062 . EDI_238810 816 SMILNEK|VK 0.055 . EDI_238810 818 ILNEKVK|AG 0.069 . EDI_238810 822 KVKAGAK|EP 0.061 . EDI_238810 832 FQIPPIK|YS 0.066 . EDI_238810 835 PPIKYSR|PT 0.086 . EDI_238810 838 KYSRPTR|FL 0.476 . EDI_238810 845 FLTNAYR|TI 0.089 . EDI_238810 849 AYRTIPK|CL 0.065 . EDI_238810 860 DDDCSIK|CI 0.065 . EDI_238810 867 CISLPLK|QD 0.066 . EDI_238810 873 KQDDSNK|CS 0.061 . EDI_238810 889 STMYHSR|WT 0.180 . EDI_238810 919 NLYIHHR|RP 0.087 . EDI_238810 920 LYIHHRR|PQ 0.149 . EDI_238810 933 YFEIFIK|SP 0.093 . EDI_238810 941 PETGEMK|LL 0.067 . EDI_238810 991 ELSFNIK|ES 0.069 . EDI_238810 995 NIKESFK|NY 0.062 . EDI_238810 1006 SFGPNIK|SQ 0.079 . EDI_238810 1011 IKSQGFK|KV 0.100 . EDI_238810 1012 KSQGFKK|VI 0.155 . EDI_238810 1031 VNEHEGK|GS 0.058 . EDI_238810 1037 KGSLCFK|AK 0.073 . EDI_238810 1039 SLCFKAK|VT 0.090 . EDI_238810 1042 FKAKVTK|FG 0.070 . EDI_238810 1049 FGLYGFR|KP 0.069 . EDI_238810 1050 GLYGFRK|PT 0.119 . EDI_238810 1055 RKPTSGK|FR 0.070 . EDI_238810 1057 PTSGKFR|VT 0.167 . EDI_238810 1078 YFSDSER|TL 0.086 . EDI_238810 1093 DETEANK|VH 0.055 . ____________________________^_________________

  • Fasta :-

    >EDI_238810 ATGCTAGGTACTAAAGGCATTATTGCTATTGTGGCTATAGCCTCTGCTATTGTTACAGGA GTAATCATTATTGTTGTCGTTGTCACACTCTCTGTGGTCTTAACTAGAGACAACGTTGAA GAAACTAACCTTGTTGATATTTCTGATATTATTACTAACGACCCACAAATGACAAATGAA ATGGACACTTTAGAGGTTATTTCTTCTTCTAAATTTAGTGGAACAAAACCAAAGGAATGG CAAATGAAATACACAAAATATCCATATTGGAGGTGTGGACTTACATTTACTAATGAAGAA AAACAAAACATTATTGATGAAAATAAGGAATATATGAATTCGTTATTAGAACTTATTAAG AGTGGATCATTAGGAAGAATGCCAGAAAAATTTGGTGGAGAAAAACAATTTGAAGCTGAT GAAGTTAATTGGAATGCTGATAGATTAGAAGTTAGATATGGTGTTTTCGGTAGAGTTTTT GGTCAAAGAGCTGTTGCATGGGCTTTTCCAGGGGAAGTAGTCACAATTAAATTCCCTAAA GGAATGAGTTATAAAGGAGTTCAAGTTAGTATTGGTAAATGTAATCATAATCCTAGTGAC CAATGGTTAGACAATATTAGTAGGTGGTCAAATGATAGAATGCCAATTGATTCAATTGGA TTTGATTTAGGAAAAAATACAACTGAATCATATATTATTAATGACACATTTAAAATAGGT TCACCATTTGGAGGTATGGTTTATTTAAGACTTGATGCAACATTTACAAATTCATTTTAT GTTACGTTCAGTAATGTTGGAAGGGCTCCAATTATTAACTATAATATTACGACAAATGAA GAGTGGAATAGTGTTTTGAAAAATGCACCAGGAAATGTTGCAGAAATAAGAACTCCAGGA AATAGACTTGTATTTACTTCAAGACACATTAGAAATTTGGAAGACGCACAATACATTAGT GATTACTGGTTAAAAGCTATCAGTATTTCTAACTATGCTGTTACACTTGAAAACATTCCA ATCACATTAAACTTTGATCAAAGAGTTGATGCTGGAGCTGCTGTTGCATTTGTAGGAAGA TGGTTTACTCAACACCCATCTGATTGGGCGTCTGGATGCGTTAACAAAGAAGGATTAATA AATTCTGGAAATTGGGGACCATTACATGAAATGAATCATCACATGCAAGGAACTTATTTA AGAGGAGGAAATTGGGGTATCAAAGAACCAGGAGAAGAAACTAATAATGTTATGACATCA ATTAATTATATTTTGTATACGAATATTGCAGGACATAGAAATCAAGGGCTTAGTGGTTGG AATTATGTTTCTGATGGCTATTCTACAATATATAAAATTCTTAATGGTGAAAATGATCAA CCTCATTTAAGGTCTTATGTTAATATTGCACATGCATTTGGAACAGATACTTTAATTGCT TTAGTTAAATCTTATTATGGGTTATGGTATGAAAATAATTATGAAGGTGAGTATTCAATT AAGAGAGATTCAACTTCAGCTTTCTGTTTGTTAGCTGCAATTGCTACAAAAAGAGATACT AGATATTTATGTTCTCTTTTTAAATACGATATACAACAAAATGTTTCAGAAGCAATTAAA AACATGAATTATCCAACTTATTATCCATTCTTCAATGTTTATGCTATGAGTTACAATGGA AATTATTATGGAAGAACATATAAAATTCCATATGGTACAACTAGATTGAATTTTACAGCA ACCACTGCTATAGATCCAAGTGCAACTAGTGTTAGTTACACCATTAAATCTGGTTTAACT AAAGGAAAGTTAGAACAAGTTGAAGAAAATGTTTATGATTATACACCAAACTTTGGAGCA GATGAAAATGATACTTTTGTTTTGAATATTGATTGTATCGTTAATGGAGAAAAGGTACAT ATTGAACAAGACGGAACATTTGAACTAGACCCACATCAAGTAGAGTATGAAGTTTATAAA GATGTTAAAACAAAAGATATGGAACAAGCTCTTAATACTATTCAGAATAAAACTTCTAAT TATACTGGTACGTCTACATTCTTTGGAATTGGAAATTATGATGATGGAACAATGCAATCA ATGTTAGTAGAAAAAGGTAAACTGATAGTTCCAACATCAGGATATTATACATTGTTTATG AAAGCAGATGATTTAGGAAGGTTGTTGTTAAATGTTAATGGAGAGTATGAACAATTATTA AATGTTAAAACATATCTTGGAGGTTATTCAAAAACTATCAATGGAACTTATGCAACTGTA AAATTAGAGAAAGATACTGAATATCCATTTATTCTTTACAACCTAAATACTGGAGGACAA GGATTTATTAGAATAGGGTATTGTTATCAAGGAACAGATCAGTCTAGTGTTAATGTTTCT AAATGTAGTGTATTAGATATTGGAAGCTCTATGATCCTTAATGAAAAAGTTAAAGCAGGA GCAAAAGAACCAGAATTTCAAATACCACCAATTAAGTATAGTAGACCAACAAGATTCTTA ACCAATGCATATAGAACTATTCCAAAATGTTTGAATGGTGATGATGATTGTTCCATTAAA TGTATCTCATTGCCACTTAAACAAGATGATTCAAACAAATGTTCTAATATGTTTGATGAT AATTACTCTACTATGTATCATTCAAGATGGACTGGAGGTGGAACTACTTTCCCAGTTAAT TATACATTTGAATTCCCTGAAAATGTAACATTTAACAATTTGTATATTCATCACAGAAGA CCTCAAGATTCATGGGGATACTTTGAAATATTTATTAAATCTCCAGAGACTGGTGAAATG AAGTTATTAGAAGAGTATAATCATCAACAATCTACTACAACAGAGATTGATTTCCAAGAT TTAATTACAACTGATAGCGTTCAATTTATTGTATACAATAATTCAAATGGTGGAAATTAT GTTAATGTAGTTGAATTGTCCTTTAATATTAAGGAAAGTTTTAAGAATTATACAAATTCA TTTGGACCAAATATTAAGAGTCAAGGATTTAAGAAAGTCATTACACCAGGTGCTTCAGGA GGATATCTTGCAGTCAATGAACATGAAGGAAAAGGATCACTTTGTTTCAAAGCTAAAGTC ACTAAATTTGGGCTTTATGGATTTAGAAAACCAACATCTGGAAAATTTAGAGTTACAATT GATTCTCAACAAGGTGAAGTTACTAGCCAAAGTTATTTCTCTGATTCTGAAAGAACATTA TTCTATACTCATACTTTTGATGAAACTGAAGCAAATAAAGTTCATGATATCTGTGTAGAT GTTGTTGAGGGAACAATTAATCTTGATATTATTGGTTCTTCTTAA
  • Download Fasta

  • Fasta :-

    MLGTKGIIAIVAIASAIVTGVIIIVVVVTLSVVLTRDNVEETNLVDISDIITNDPQMTNE MDTLEVISSSKFSGTKPKEWQMKYTKYPYWRCGLTFTNEEKQNIIDENKEYMNSLLELIK SGSLGRMPEKFGGEKQFEADEVNWNADRLEVRYGVFGRVFGQRAVAWAFPGEVVTIKFPK GMSYKGVQVSIGKCNHNPSDQWLDNISRWSNDRMPIDSIGFDLGKNTTESYIINDTFKIG SPFGGMVYLRLDATFTNSFYVTFSNVGRAPIINYNITTNEEWNSVLKNAPGNVAEIRTPG NRLVFTSRHIRNLEDAQYISDYWLKAISISNYAVTLENIPITLNFDQRVDAGAAVAFVGR WFTQHPSDWASGCVNKEGLINSGNWGPLHEMNHHMQGTYLRGGNWGIKEPGEETNNVMTS INYILYTNIAGHRNQGLSGWNYVSDGYSTIYKILNGENDQPHLRSYVNIAHAFGTDTLIA LVKSYYGLWYENNYEGEYSIKRDSTSAFCLLAAIATKRDTRYLCSLFKYDIQQNVSEAIK NMNYPTYYPFFNVYAMSYNGNYYGRTYKIPYGTTRLNFTATTAIDPSATSVSYTIKSGLT KGKLEQVEENVYDYTPNFGADENDTFVLNIDCIVNGEKVHIEQDGTFELDPHQVEYEVYK DVKTKDMEQALNTIQNKTSNYTGTSTFFGIGNYDDGTMQSMLVEKGKLIVPTSGYYTLFM KADDLGRLLLNVNGEYEQLLNVKTYLGGYSKTINGTYATVKLEKDTEYPFILYNLNTGGQ GFIRIGYCYQGTDQSSVNVSKCSVLDIGSSMILNEKVKAGAKEPEFQIPPIKYSRPTRFL TNAYRTIPKCLNGDDDCSIKCISLPLKQDDSNKCSNMFDDNYSTMYHSRWTGGGTTFPVN YTFEFPENVTFNNLYIHHRRPQDSWGYFEIFIKSPETGEMKLLEEYNHQQSTTTEIDFQD LITTDSVQFIVYNNSNGGNYVNVVELSFNIKESFKNYTNSFGPNIKSQGFKKVITPGASG GYLAVNEHEGKGSLCFKAKVTKFGLYGFRKPTSGKFRVTIDSQQGEVTSQSYFSDSERTL FYTHTFDETEANKVHDICVDVVEGTINLDIIGSS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_2388101074 SQSYFSDSER0.992unspEDI_2388101074 SQSYFSDSER0.992unspEDI_2388101074 SQSYFSDSER0.992unspEDI_238810504 SIKRDSTSAF0.996unspEDI_2388101053 SRKPTSGKFR0.992unsp

EDI_238810      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India