• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008236      

  • Computed_GO_Functions:  serine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_251670SP0.0019180.9980280.000054CS pos: 17-18. LTA-ND. Pr: 0.4737
No Results
  • Fasta :-

    >EDI_251670 MISLLWLTIGIVSALTANDVLNKTSYIIAMTSDNNNYVYYIVKSVVNGIETNTLYQTSIQ NEGKYFIELAQGVGNELYYSVAHHSIFYTKCDSICSLYSFDSNMKEYQVTKDIDISLPVV IKEHLYFISPIFFGMTVQDSLDLQNKLVNRKQTSHHVFTQTPFGEGSSYITTNDDGTPQY KHLISSTITVDENGKINIGKYTDISNEVGNVISYDISDDETIIVFEGKSTAPASDKKNYL KSSIYTISVGSDQATCISCNYPGNQIEPKATKTGKYIIFMRTTNIIEKNPAKYFVLYDLE DGSYKADVTLNEFTTEKYLISKHNNEETISIFVINNRREALAIRKAIYSFELKTWNIEEV IVEGAVEMMAEVPCHDESSCLFITQSFQYQPSEIYYCDESMKLTKLTKLNDYTSYNLQKP ILINPMGSLNDRIQSLLYLPSNNEKAPILLVVHDEEEGTVIDGFNKIMNPYVYTNEGYAV IMINSHVSKGFGERMRIKGSNDINIIIEDIKAVINELEKYPVDTSKIAVVGVFGASKIVT ALLDAKLPIVLAAVHAPILSIRSQYYTDAKYTLEYTFEGADYDNSYWYNHNDAMKNVASY SVPTLISYGDLDFVVDKSQPISLFQALQRRGIKSRLLRFPYSTNVLTKNEDIKVFYEQYL RWFNENMKN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_251670.fa Sequence name : EDI_251670 Sequence length : 669 VALUES OF COMPUTED PARAMETERS Coef20 : 4.605 CoefTot : -1.041 ChDiff : -20 ZoneTo : 49 KR : 2 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.129 2.082 0.334 0.730 MesoH : -0.410 0.698 -0.346 0.296 MuHd_075 : 32.087 21.004 8.546 6.852 MuHd_095 : 32.625 28.938 10.585 7.449 MuHd_100 : 35.298 29.049 10.163 7.509 MuHd_105 : 31.714 25.280 9.179 6.593 Hmax_075 : 14.233 23.100 4.172 5.647 Hmax_095 : 13.400 22.300 2.645 6.420 Hmax_100 : 15.600 17.700 3.387 5.800 Hmax_105 : 15.600 17.700 2.277 5.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9226 0.0774 DFMC : 0.8762 0.1238
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 669 EDI_251670 MISLLWLTIGIVSALTANDVLNKTSYIIAMTSDNNNYVYYIVKSVVNGIETNTLYQTSIQNEGKYFIELAQGVGNELYYS 80 VAHHSIFYTKCDSICSLYSFDSNMKEYQVTKDIDISLPVVIKEHLYFISPIFFGMTVQDSLDLQNKLVNRKQTSHHVFTQ 160 TPFGEGSSYITTNDDGTPQYKHLISSTITVDENGKINIGKYTDISNEVGNVISYDISDDETIIVFEGKSTAPASDKKNYL 240 KSSIYTISVGSDQATCISCNYPGNQIEPKATKTGKYIIFMRTTNIIEKNPAKYFVLYDLEDGSYKADVTLNEFTTEKYLI 320 SKHNNEETISIFVINNRREALAIRKAIYSFELKTWNIEEVIVEGAVEMMAEVPCHDESSCLFITQSFQYQPSEIYYCDES 400 MKLTKLTKLNDYTSYNLQKPILINPMGSLNDRIQSLLYLPSNNEKAPILLVVHDEEEGTVIDGFNKIMNPYVYTNEGYAV 480 IMINSHVSKGFGERMRIKGSNDINIIIEDIKAVINELEKYPVDTSKIAVVGVFGASKIVTALLDAKLPIVLAAVHAPILS 560 IRSQYYTDAKYTLEYTFEGADYDNSYWYNHNDAMKNVASYSVPTLISYGDLDFVVDKSQPISLFQALQRRGIKSRLLRFP 640 YSTNVLTKNEDIKVFYEQYLRWFNENMKN 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_251670 23 ANDVLNK|TS 0.064 . EDI_251670 43 YVYYIVK|SV 0.101 . EDI_251670 64 SIQNEGK|YF 0.072 . EDI_251670 90 HSIFYTK|CD 0.065 . EDI_251670 105 SFDSNMK|EY 0.056 . EDI_251670 111 KEYQVTK|DI 0.103 . EDI_251670 122 SLPVVIK|EH 0.055 . EDI_251670 146 SLDLQNK|LV 0.085 . EDI_251670 150 QNKLVNR|KQ 0.079 . EDI_251670 151 NKLVNRK|QT 0.100 . EDI_251670 181 DGTPQYK|HL 0.066 . EDI_251670 195 TVDENGK|IN 0.060 . EDI_251670 200 GKINIGK|YT 0.091 . EDI_251670 228 IIVFEGK|ST 0.088 . EDI_251670 236 TAPASDK|KN 0.058 . EDI_251670 237 APASDKK|NY 0.087 . EDI_251670 241 DKKNYLK|SS 0.076 . EDI_251670 269 GNQIEPK|AT 0.081 . EDI_251670 272 IEPKATK|TG 0.060 . EDI_251670 275 KATKTGK|YI 0.082 . EDI_251670 281 KYIIFMR|TT 0.114 . EDI_251670 288 TTNIIEK|NP 0.061 . EDI_251670 292 IEKNPAK|YF 0.062 . EDI_251670 305 LEDGSYK|AD 0.057 . EDI_251670 317 NEFTTEK|YL 0.064 . EDI_251670 322 EKYLISK|HN 0.064 . EDI_251670 337 IFVINNR|RE 0.068 . EDI_251670 338 FVINNRR|EA 0.129 . EDI_251670 344 REALAIR|KA 0.096 . EDI_251670 345 EALAIRK|AI 0.074 . EDI_251670 353 IYSFELK|TW 0.069 . EDI_251670 402 YCDESMK|LT 0.054 . EDI_251670 405 ESMKLTK|LT 0.061 . EDI_251670 408 KLTKLTK|LN 0.057 . EDI_251670 419 TSYNLQK|PI 0.076 . EDI_251670 432 MGSLNDR|IQ 0.080 . EDI_251670 445 LPSNNEK|AP 0.065 . EDI_251670 466 VIDGFNK|IM 0.059 . EDI_251670 489 INSHVSK|GF 0.104 . EDI_251670 494 SKGFGER|MR 0.096 . EDI_251670 496 GFGERMR|IK 0.097 . EDI_251670 498 GERMRIK|GS 0.077 . EDI_251670 511 IIIEDIK|AV 0.074 . EDI_251670 519 VINELEK|YP 0.056 . EDI_251670 526 YPVDTSK|IA 0.079 . EDI_251670 537 GVFGASK|IV 0.075 . EDI_251670 546 TALLDAK|LP 0.056 . EDI_251670 562 APILSIR|SQ 0.106 . EDI_251670 570 QYYTDAK|YT 0.066 . EDI_251670 595 NHNDAMK|NV 0.070 . EDI_251670 617 LDFVVDK|SQ 0.086 . EDI_251670 629 LFQALQR|RG 0.078 . EDI_251670 630 FQALQRR|GI 0.143 . EDI_251670 633 LQRRGIK|SR 0.122 . EDI_251670 635 RRGIKSR|LL 0.101 . EDI_251670 638 IKSRLLR|FP 0.238 . EDI_251670 648 STNVLTK|NE 0.075 . EDI_251670 653 TKNEDIK|VF 0.066 . EDI_251670 661 FYEQYLR|WF 0.067 . EDI_251670 668 WFNENMK|N- 0.064 . ____________________________^_________________
  • Fasta :-

    >EDI_251670 ATGATTAGTTTATTGTGGCTTACAATTGGCATCGTTAGTGCACTTACAGCAAATGATGTC TTAAATAAAACTAGTTATATTATTGCTATGACATCAGATAATAACAATTATGTTTATTAT ATTGTTAAGTCAGTTGTTAATGGAATAGAAACAAATACATTATATCAAACAAGTATTCAA AATGAAGGGAAATATTTCATTGAACTTGCTCAAGGAGTTGGAAATGAATTATATTATAGT GTTGCCCATCATTCAATATTTTATACTAAATGTGATAGTATTTGTTCATTATATTCATTC GATTCAAATATGAAAGAATATCAAGTAACTAAAGATATTGATATTTCATTACCTGTTGTT ATTAAAGAACATCTTTATTTTATTTCTCCTATATTCTTTGGAATGACTGTTCAAGATTCA TTAGATCTCCAAAATAAATTAGTAAATAGAAAACAAACTTCTCATCATGTTTTTACACAA ACACCATTTGGAGAAGGATCATCTTATATTACAACAAATGATGATGGTACACCACAATAT AAACATTTAATTTCATCAACAATTACTGTAGATGAAAATGGAAAAATTAATATTGGAAAA TATACAGATATTTCAAATGAAGTAGGAAATGTTATTTCATATGATATTAGTGATGATGAA ACAATAATTGTTTTTGAAGGTAAATCAACAGCACCAGCAAGTGATAAAAAAAATTATTTA AAATCATCAATTTATACAATTTCTGTTGGAAGTGATCAAGCTACATGTATTTCATGTAAT TATCCTGGAAATCAAATTGAACCAAAAGCTACAAAAACAGGAAAATATATTATTTTTATG AGAACTACAAATATAATTGAGAAAAATCCAGCTAAATATTTTGTTTTATATGATCTTGAA GATGGATCATATAAAGCTGATGTTACTCTTAATGAATTTACTACAGAAAAATATTTAATT AGTAAACATAATAATGAAGAAACAATTAGTATATTTGTAATAAATAATAGAAGAGAAGCT TTAGCTATAAGAAAAGCTATATATTCATTTGAATTAAAAACATGGAATATTGAAGAAGTT ATTGTTGAAGGAGCTGTAGAAATGATGGCAGAAGTTCCATGTCATGATGAAAGTTCATGT TTATTCATTACACAATCATTCCAATATCAACCAAGTGAAATTTATTATTGTGATGAATCA ATGAAATTAACTAAATTAACTAAATTAAATGATTATACTTCTTATAACCTTCAAAAACCA ATTCTTATTAATCCAATGGGATCATTAAATGATAGAATTCAATCATTACTTTATCTTCCA TCAAATAATGAAAAAGCACCAATTCTTTTAGTTGTTCATGATGAAGAAGAAGGAACTGTT ATTGATGGTTTTAATAAAATTATGAATCCATATGTTTATACAAATGAAGGATATGCTGTT ATAATGATTAACTCACATGTTAGTAAAGGATTTGGAGAACGTATGAGAATTAAAGGATCA AATGATATAAATATTATTATTGAAGATATTAAAGCAGTTATTAATGAATTAGAAAAATAT CCAGTAGATACTTCTAAAATTGCAGTTGTTGGAGTTTTTGGTGCATCAAAAATTGTTACT GCATTATTAGATGCTAAATTACCTATTGTATTAGCTGCTGTTCATGCACCAATTCTTTCA ATTAGATCACAATATTATACTGATGCTAAATATACATTAGAATATACATTTGAAGGAGCA GATTATGATAACTCTTATTGGTATAATCATAATGATGCTATGAAAAATGTAGCATCATAT AGTGTTCCAACACTTATTTCATATGGTGATCTTGATTTTGTTGTTGATAAATCACAACCA ATTTCATTATTCCAAGCATTACAACGTAGAGGAATTAAATCTAGACTTCTTAGATTCCCA TACTCTACAAATGTATTAACGAAGAATGAAGATATTAAAGTGTTCTATGAACAATACTTA AGATGGTTCAATGAGAATATGAAGAACTAA
  • Download Fasta
  • Fasta :-

    MISLLWLTIGIVSALTANDVLNKTSYIIAMTSDNNNYVYYIVKSVVNGIETNTLYQTSIQ NEGKYFIELAQGVGNELYYSVAHHSIFYTKCDSICSLYSFDSNMKEYQVTKDIDISLPVV IKEHLYFISPIFFGMTVQDSLDLQNKLVNRKQTSHHVFTQTPFGEGSSYITTNDDGTPQY KHLISSTITVDENGKINIGKYTDISNEVGNVISYDISDDETIIVFEGKSTAPASDKKNYL KSSIYTISVGSDQATCISCNYPGNQIEPKATKTGKYIIFMRTTNIIEKNPAKYFVLYDLE DGSYKADVTLNEFTTEKYLISKHNNEETISIFVINNRREALAIRKAIYSFELKTWNIEEV IVEGAVEMMAEVPCHDESSCLFITQSFQYQPSEIYYCDESMKLTKLTKLNDYTSYNLQKP ILINPMGSLNDRIQSLLYLPSNNEKAPILLVVHDEEEGTVIDGFNKIMNPYVYTNEGYAV IMINSHVSKGFGERMRIKGSNDINIIIEDIKAVINELEKYPVDTSKIAVVGVFGASKIVT ALLDAKLPIVLAAVHAPILSIRSQYYTDAKYTLEYTFEGADYDNSYWYNHNDAMKNVASY SVPTLISYGDLDFVVDKSQPISLFQALQRRGIKSRLLRFPYSTNVLTKNEDIKVFYEQYL RWFNENMKN

    No Results
No Results
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EDI_251670      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India