EDI_252380 | cathepsin L, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_252380SP0.0571430.9427880.000069CS pos: 17-18. CFG-DE. Pr: 0.9580
No Results

  • Fasta :-

    >EDI_252380 MNIINVVILMLFVNCFGDEFKEFLKTNQIVYSTPSEMLRRRVIFEQSKKEIEEFNKEPHS FFLGITQFADKTDEEFNQMFSMKMDRQDEFSMMSTDEEENKNESDDIYMEYNLNQDEETY GREMRRKVRGKKYRGVRFMRKVHVPKKYRIGRKWQFNKKKDSVKELPEGIDFRKFGKLTY IREQTGCGGCWSFASVCALESRYLIDYNLTVDDVGRTWALSEQQLLDCCIENNGCEGGSM ERSFRCMNRTKGVMQRVRYPYEAETQDCKEFNNEYKEVTLGGYALVPRGNERALMSAIHK FGVLGIGLDTRSKLFKHYRGGIYYNEECTRRGLSHAMNLVGYGTTKEGQKYYIIRNSWGD WKWGEDGYMRLYRGGNHCGVATNAFFPLFVRRVNDEPKPMSHTETMIKDLINRHRLGWI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_252380.fa Sequence name : EDI_252380 Sequence length : 419 VALUES OF COMPUTED PARAMETERS Coef20 : 4.104 CoefTot : -0.408 ChDiff : 7 ZoneTo : 17 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.500 2.041 0.262 0.695 MesoH : -1.213 -0.085 -0.410 0.066 MuHd_075 : 15.058 9.954 3.031 3.936 MuHd_095 : 19.991 14.922 6.852 4.007 MuHd_100 : 7.860 4.535 2.415 0.933 MuHd_105 : 12.419 7.414 2.489 2.403 Hmax_075 : 13.125 17.600 2.114 6.080 Hmax_095 : 21.800 26.800 6.490 7.890 Hmax_100 : 14.200 17.900 2.946 5.350 Hmax_105 : 19.200 21.700 4.002 7.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9773 0.0227 DFMC : 0.9914 0.0086
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 419 EDI_252380 MNIINVVILMLFVNCFGDEFKEFLKTNQIVYSTPSEMLRRRVIFEQSKKEIEEFNKEPHSFFLGITQFADKTDEEFNQMF 80 SMKMDRQDEFSMMSTDEEENKNESDDIYMEYNLNQDEETYGREMRRKVRGKKYRGVRFMRKVHVPKKYRIGRKWQFNKKK 160 DSVKELPEGIDFRKFGKLTYIREQTGCGGCWSFASVCALESRYLIDYNLTVDDVGRTWALSEQQLLDCCIENNGCEGGSM 240 ERSFRCMNRTKGVMQRVRYPYEAETQDCKEFNNEYKEVTLGGYALVPRGNERALMSAIHKFGVLGIGLDTRSKLFKHYRG 320 GIYYNEECTRRGLSHAMNLVGYGTTKEGQKYYIIRNSWGDWKWGEDGYMRLYRGGNHCGVATNAFFPLFVRRVNDEPKPM 400 SHTETMIKDLINRHRLGWI 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_252380 21 CFGDEFK|EF 0.057 . EDI_252380 25 EFKEFLK|TN 0.060 . EDI_252380 39 TPSEMLR|RR 0.091 . EDI_252380 40 PSEMLRR|RV 0.159 . EDI_252380 41 SEMLRRR|VI 0.153 . EDI_252380 48 VIFEQSK|KE 0.059 . EDI_252380 49 IFEQSKK|EI 0.098 . EDI_252380 56 EIEEFNK|EP 0.058 . EDI_252380 71 ITQFADK|TD 0.064 . EDI_252380 83 NQMFSMK|MD 0.092 . EDI_252380 86 FSMKMDR|QD 0.105 . EDI_252380 101 TDEEENK|NE 0.073 . EDI_252380 122 DEETYGR|EM 0.074 . EDI_252380 125 TYGREMR|RK 0.209 . EDI_252380 126 YGREMRR|KV 0.198 . EDI_252380 127 GREMRRK|VR 0.128 . EDI_252380 129 EMRRKVR|GK 0.257 . EDI_252380 131 RRKVRGK|KY 0.095 . EDI_252380 132 RKVRGKK|YR 0.321 . EDI_252380 134 VRGKKYR|GV 0.267 . EDI_252380 137 KKYRGVR|FM 0.299 . EDI_252380 140 RGVRFMR|KV 0.329 . EDI_252380 141 GVRFMRK|VH 0.069 . EDI_252380 146 RKVHVPK|KY 0.083 . EDI_252380 147 KVHVPKK|YR 0.111 . EDI_252380 149 HVPKKYR|IG 0.091 . EDI_252380 152 KKYRIGR|KW 0.222 . EDI_252380 153 KYRIGRK|WQ 0.088 . EDI_252380 158 RKWQFNK|KK 0.068 . EDI_252380 159 KWQFNKK|KD 0.108 . EDI_252380 160 WQFNKKK|DS 0.188 . EDI_252380 164 KKKDSVK|EL 0.074 . EDI_252380 173 PEGIDFR|KF 0.100 . EDI_252380 174 EGIDFRK|FG 0.068 . EDI_252380 177 DFRKFGK|LT 0.070 . EDI_252380 182 GKLTYIR|EQ 0.080 . EDI_252380 202 VCALESR|YL 0.106 . EDI_252380 216 TVDDVGR|TW 0.105 . EDI_252380 242 EGGSMER|SF 0.099 . EDI_252380 245 SMERSFR|CM 0.228 . EDI_252380 249 SFRCMNR|TK 0.117 . EDI_252380 251 RCMNRTK|GV 0.092 . EDI_252380 256 TKGVMQR|VR 0.109 . EDI_252380 258 GVMQRVR|YP 0.119 . EDI_252380 269 AETQDCK|EF 0.058 . EDI_252380 276 EFNNEYK|EV 0.088 . EDI_252380 288 GYALVPR|GN 0.132 . EDI_252380 292 VPRGNER|AL 0.113 . EDI_252380 300 LMSAIHK|FG 0.065 . EDI_252380 311 GIGLDTR|SK 0.089 . EDI_252380 313 GLDTRSK|LF 0.060 . EDI_252380 316 TRSKLFK|HY 0.108 . EDI_252380 319 KLFKHYR|GG 0.098 . EDI_252380 330 YNEECTR|RG 0.069 . EDI_252380 331 NEECTRR|GL 0.171 . EDI_252380 346 VGYGTTK|EG 0.059 . EDI_252380 350 TTKEGQK|YY 0.065 . EDI_252380 355 QKYYIIR|NS 0.096 . EDI_252380 362 NSWGDWK|WG 0.069 . EDI_252380 370 GEDGYMR|LY 0.091 . EDI_252380 373 GYMRLYR|GG 0.307 . EDI_252380 391 FFPLFVR|RV 0.088 . EDI_252380 392 FPLFVRR|VN 0.141 . EDI_252380 398 RVNDEPK|PM 0.087 . EDI_252380 408 HTETMIK|DL 0.064 . EDI_252380 413 IKDLINR|HR 0.070 . EDI_252380 415 DLINRHR|LG 0.087 . ____________________________^_________________

  • Fasta :-

    >EDI_252380 ATGAACATTATTAATGTTGTTATACTAATGCTTTTTGTTAATTGTTTTGGAGATGAGTTT AAAGAATTTCTCAAAACAAATCAGATTGTATACTCAACACCTTCAGAAATGTTAAGAAGA AGAGTTATATTTGAACAAAGCAAAAAAGAAATAGAAGAATTCAACAAAGAACCACATTCT TTCTTTTTAGGAATAACACAGTTTGCCGATAAAACTGATGAAGAATTTAATCAAATGTTT TCAATGAAAATGGATCGACAAGATGAATTTTCTATGATGTCTACTGATGAAGAAGAAAAC AAAAATGAATCAGACGATATTTATATGGAATATAACCTTAATCAAGACGAAGAAACATAT GGAAGAGAAATGAGAAGAAAGGTACGTGGAAAAAAGTATCGTGGAGTTCGTTTTATGAGA AAGGTTCATGTACCTAAAAAATATAGAATTGGTAGAAAATGGCAATTTAATAAAAAAAAG GATAGTGTTAAGGAATTACCAGAAGGTATTGACTTTAGAAAATTTGGTAAACTAACGTAT ATTAGAGAACAAACTGGGTGTGGTGGATGCTGGAGTTTTGCTAGTGTTTGTGCATTAGAA TCTAGGTATCTTATTGATTACAATCTTACTGTAGATGACGTTGGTAGGACATGGGCATTA AGTGAACAACAATTATTAGATTGTTGTATTGAAAATAATGGATGCGAAGGTGGGAGTATG GAAAGATCATTTAGGTGCATGAACAGAACTAAAGGTGTTATGCAAAGAGTAAGATATCCA TATGAAGCAGAAACACAAGACTGTAAAGAATTTAATAATGAATATAAAGAAGTTACATTA GGTGGATATGCATTAGTACCTCGTGGAAATGAAAGAGCATTAATGAGTGCAATACATAAA TTTGGGGTATTAGGAATAGGATTAGATACAAGAAGTAAGTTATTCAAACATTATAGGGGA GGAATTTATTATAATGAAGAATGTACAAGAAGAGGATTAAGTCATGCAATGAATCTTGTT GGTTATGGCACAACCAAAGAAGGACAAAAATATTATATTATTCGTAATAGTTGGGGTGAT TGGAAATGGGGGGAAGATGGGTATATGAGACTTTATAGAGGAGGAAATCATTGTGGAGTT GCCACAAATGCGTTTTTCCCATTATTTGTTAGAAGAGTAAATGATGAACCTAAACCAATG TCACACACTGAAACAATGATTAAAGACCTTATTAATAGGCATCGATTAGGATGGATATAA
  • Download Fasta

  • Fasta :-

    MNIINVVILMLFVNCFGDEFKEFLKTNQIVYSTPSEMLRRRVIFEQSKKEIEEFNKEPHS FFLGITQFADKTDEEFNQMFSMKMDRQDEFSMMSTDEEENKNESDDIYMEYNLNQDEETY GREMRRKVRGKKYRGVRFMRKVHVPKKYRIGRKWQFNKKKDSVKELPEGIDFRKFGKLTY IREQTGCGGCWSFASVCALESRYLIDYNLTVDDVGRTWALSEQQLLDCCIENNGCEGGSM ERSFRCMNRTKGVMQRVRYPYEAETQDCKEFNNEYKEVTLGGYALVPRGNERALMSAIHK FGVLGIGLDTRSKLFKHYRGGIYYNEECTRRGLSHAMNLVGYGTTKEGQKYYIIRNSWGD WKWGEDGYMRLYRGGNHCGVATNAFFPLFVRRVNDEPKPMSHTETMIKDLINRHRLGWI

  • title: active site
  • coordinates: Q184,C190,H335,N356
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_252380401 SPKPMSHTET0.995unspEDI_252380401 SPKPMSHTET0.995unspEDI_252380401 SPKPMSHTET0.995unspEDI_252380162 SKKKDSVKEL0.998unspEDI_252380357 SIIRNSWGDW0.997unsp

EDI_252380      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India