EDI_255230 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

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  • Computed_GO_Process_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
EDI_255230OTHER0.9190870.0768720.004041
No Results

  • Fasta :-

    >EDI_255230 MFLSKLSAFPITQKVAVILIFLVLMIQFGVMLYFRFAPFIKENEIVASFEKSVGSVTDIA STYLNDESSKITIPPKARIPHGNPRYYQMERGTCWDFALIGFLEDNYRQNGIAKGFLEEN EYVRFSTQVLGIRMVEHCKEHPDVCNTPGDSLLLNSTSGGEINWFYSFPGLYNQILPDSV CPYTPTDVDEFVCNKMEEATKTNPIKFNVTKMNIATTVDDVKKLFIQKGKRALAWTSLIH DDFEYFPCTEYSDLCNSGLYEIIKCPIKYGNDNCVKITLPMYTPDAEFDRHEEMQMAGGH GMVMVGYNDEFVTKAGFKGGFILKNSWNDTIYGNYPGSTGRNARGSHSIEYFMGEISYEE ELLICPNAQDPLNWDTCYGNCYENNTENEYWMSISNRPYEFKCVNEKICSTDPVYRYFMK SLLPSQKQPNGRYFDICMIRVNSLDNSHIDLCYHALPTQVIALYYTPIDSQLQKLKPNED YCGYYFFPYDIVEQHQSYFGGFNCIYYDIDWDDSSYLKNMVDGFDYQYVNKSTGKQNFDE VHFVASAPFINQRY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_255230.fa Sequence name : EDI_255230 Sequence length : 554 VALUES OF COMPUTED PARAMETERS Coef20 : 4.593 CoefTot : -0.048 ChDiff : -23 ZoneTo : 41 KR : 4 DE : 0 CleavSite : 37 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.412 2.882 0.436 0.931 MesoH : -0.048 0.799 -0.260 0.339 MuHd_075 : 23.697 15.527 7.046 5.021 MuHd_095 : 18.957 13.020 5.045 5.025 MuHd_100 : 19.243 15.385 6.139 5.097 MuHd_105 : 17.012 13.449 6.373 4.838 Hmax_075 : 16.625 15.600 2.807 5.190 Hmax_095 : 21.100 22.750 3.446 6.920 Hmax_100 : 21.400 27.200 3.171 7.220 Hmax_105 : 19.000 25.317 3.466 7.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8493 0.1507 DFMC : 0.7401 0.2599
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 554 EDI_255230 MFLSKLSAFPITQKVAVILIFLVLMIQFGVMLYFRFAPFIKENEIVASFEKSVGSVTDIASTYLNDESSKITIPPKARIP 80 HGNPRYYQMERGTCWDFALIGFLEDNYRQNGIAKGFLEENEYVRFSTQVLGIRMVEHCKEHPDVCNTPGDSLLLNSTSGG 160 EINWFYSFPGLYNQILPDSVCPYTPTDVDEFVCNKMEEATKTNPIKFNVTKMNIATTVDDVKKLFIQKGKRALAWTSLIH 240 DDFEYFPCTEYSDLCNSGLYEIIKCPIKYGNDNCVKITLPMYTPDAEFDRHEEMQMAGGHGMVMVGYNDEFVTKAGFKGG 320 FILKNSWNDTIYGNYPGSTGRNARGSHSIEYFMGEISYEEELLICPNAQDPLNWDTCYGNCYENNTENEYWMSISNRPYE 400 FKCVNEKICSTDPVYRYFMKSLLPSQKQPNGRYFDICMIRVNSLDNSHIDLCYHALPTQVIALYYTPIDSQLQKLKPNED 480 YCGYYFFPYDIVEQHQSYFGGFNCIYYDIDWDDSSYLKNMVDGFDYQYVNKSTGKQNFDEVHFVASAPFINQRY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......................P........................................................ 400 ................................................................................ 480 .......................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EDI_255230 5 --MFLSK|LS 0.058 . EDI_255230 14 AFPITQK|VA 0.056 . EDI_255230 35 GVMLYFR|FA 0.100 . EDI_255230 41 RFAPFIK|EN 0.071 . EDI_255230 51 IVASFEK|SV 0.141 . EDI_255230 70 LNDESSK|IT 0.061 . EDI_255230 76 KITIPPK|AR 0.065 . EDI_255230 78 TIPPKAR|IP 0.098 . EDI_255230 85 IPHGNPR|YY 0.151 . EDI_255230 91 RYYQMER|GT 0.094 . EDI_255230 108 FLEDNYR|QN 0.097 . EDI_255230 114 RQNGIAK|GF 0.073 . EDI_255230 124 EENEYVR|FS 0.114 . EDI_255230 133 TQVLGIR|MV 0.122 . EDI_255230 139 RMVEHCK|EH 0.062 . EDI_255230 195 DEFVCNK|ME 0.059 . EDI_255230 201 KMEEATK|TN 0.061 . EDI_255230 206 TKTNPIK|FN 0.078 . EDI_255230 211 IKFNVTK|MN 0.074 . EDI_255230 222 TTVDDVK|KL 0.063 . EDI_255230 223 TVDDVKK|LF 0.105 . EDI_255230 228 KKLFIQK|GK 0.064 . EDI_255230 230 LFIQKGK|RA 0.066 . EDI_255230 231 FIQKGKR|AL 0.126 . EDI_255230 264 GLYEIIK|CP 0.065 . EDI_255230 268 IIKCPIK|YG 0.059 . EDI_255230 276 GNDNCVK|IT 0.058 . EDI_255230 290 PDAEFDR|HE 0.109 . EDI_255230 314 NDEFVTK|AG 0.074 . EDI_255230 318 VTKAGFK|GG 0.062 . EDI_255230 324 KGGFILK|NS 0.056 . EDI_255230 341 YPGSTGR|NA 0.127 . EDI_255230 344 STGRNAR|GS 0.526 *ProP* EDI_255230 397 WMSISNR|PY 0.124 . EDI_255230 402 NRPYEFK|CV 0.095 . EDI_255230 407 FKCVNEK|IC 0.062 . EDI_255230 416 STDPVYR|YF 0.112 . EDI_255230 420 VYRYFMK|SL 0.099 . EDI_255230 427 SLLPSQK|QP 0.061 . EDI_255230 432 QKQPNGR|YF 0.123 . EDI_255230 440 FDICMIR|VN 0.076 . EDI_255230 474 IDSQLQK|LK 0.062 . EDI_255230 476 SQLQKLK|PN 0.071 . EDI_255230 518 DDSSYLK|NM 0.063 . EDI_255230 531 DYQYVNK|ST 0.120 . EDI_255230 535 VNKSTGK|QN 0.074 . EDI_255230 553 APFINQR|Y- 0.106 . ____________________________^_________________

  • Fasta :-

    >EDI_255230 ATGTTCTTAAGCAAATTATCTGCATTTCCAATTACACAAAAAGTTGCAGTGATTTTAATA TTTTTAGTATTGATGATACAATTTGGAGTAATGTTATATTTTAGATTTGCACCATTTATC AAAGAGAATGAGATAGTAGCATCATTTGAAAAGTCAGTAGGAAGTGTAACTGATATTGCG TCTACATACTTAAATGATGAAAGTAGTAAAATAACAATTCCACCTAAAGCAAGAATTCCA CATGGAAATCCACGTTATTATCAAATGGAGAGAGGAACATGTTGGGATTTTGCATTAATT GGATTTTTAGAAGATAATTATAGACAAAATGGTATTGCTAAAGGATTTCTTGAAGAAAAT GAATACGTTAGATTTTCTACACAAGTATTAGGTATTCGAATGGTAGAACATTGTAAAGAA CATCCAGATGTATGTAATACACCAGGAGATTCATTATTACTTAATTCAACATCAGGAGGA GAAATCAATTGGTTTTATTCATTCCCAGGATTATATAATCAAATTTTACCAGATTCTGTT TGTCCTTATACTCCTACTGATGTAGATGAATTTGTTTGTAATAAAATGGAAGAAGCTACA AAAACAAATCCAATCAAATTTAATGTAACAAAAATGAATATTGCTACTACTGTTGATGAT GTTAAAAAATTATTTATTCAAAAAGGAAAAAGAGCATTAGCATGGACATCATTAATTCAT GATGATTTTGAATATTTCCCTTGTACTGAATATTCTGATCTTTGTAATTCAGGATTATAT GAAATAATTAAATGTCCAATTAAATATGGTAATGATAATTGTGTTAAAATTACATTACCA ATGTATACTCCTGATGCAGAATTTGATAGACATGAAGAAATGCAAATGGCAGGTGGACAT GGAATGGTTATGGTTGGATATAATGATGAATTTGTTACTAAAGCAGGATTTAAAGGAGGA TTTATATTAAAGAATTCATGGAATGATACAATTTATGGTAATTATCCAGGATCAACTGGT AGAAATGCACGTGGAAGTCATTCAATTGAATATTTTATGGGAGAAATATCATATGAAGAA GAATTATTAATTTGTCCTAATGCACAAGATCCATTAAATTGGGATACTTGTTATGGTAAT TGTTATGAAAATAATACAGAAAATGAATATTGGATGTCAATTAGTAATAGACCATATGAA TTTAAATGTGTTAATGAAAAGATTTGTTCAACTGATCCAGTTTATAGATATTTCATGAAA TCATTACTTCCATCTCAAAAACAACCAAATGGAAGATATTTTGATATTTGTATGATTCGA GTTAATTCTCTTGATAATTCACATATTGATTTATGTTATCATGCTCTTCCAACTCAAGTT ATTGCATTATATTATACTCCAATTGATTCACAATTACAAAAATTAAAACCAAATGAAGAT TATTGTGGATATTATTTCTTCCCTTATGATATCGTTGAACAACATCAATCCTATTTTGGT GGGTTTAATTGCATTTATTATGATATTGATTGGGATGATTCTAGTTATCTTAAAAATATG GTTGATGGTTTTGATTATCAATACGTTAATAAATCAACTGGAAAACAAAACTTTGATGAA GTACATTTTGTTGCCTCAGCACCATTTATTAATCAACGCTATTAA
  • Download Fasta

  • Fasta :-

    MFLSKLSAFPITQKVAVILIFLVLMIQFGVMLYFRFAPFIKENEIVASFEKSVGSVTDIA STYLNDESSKITIPPKARIPHGNPRYYQMERGTCWDFALIGFLEDNYRQNGIAKGFLEEN EYVRFSTQVLGIRMVEHCKEHPDVCNTPGDSLLLNSTSGGEINWFYSFPGLYNQILPDSV CPYTPTDVDEFVCNKMEEATKTNPIKFNVTKMNIATTVDDVKKLFIQKGKRALAWTSLIH DDFEYFPCTEYSDLCNSGLYEIIKCPIKYGNDNCVKITLPMYTPDAEFDRHEEMQMAGGH GMVMVGYNDEFVTKAGFKGGFILKNSWNDTIYGNYPGSTGRNARGSHSIEYFMGEISYEE ELLICPNAQDPLNWDTCYGNCYENNTENEYWMSISNRPYEFKCVNEKICSTDPVYRYFMK SLLPSQKQPNGRYFDICMIRVNSLDNSHIDLCYHALPTQVIALYYTPIDSQLQKLKPNED YCGYYFFPYDIVEQHQSYFGGFNCIYYDIDWDDSSYLKNMVDGFDYQYVNKSTGKQNFDE VHFVASAPFINQRY

  • title: active site
  • coordinates: Q88,C94,H300,N325
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_25523055 SKSVGSVTDI0.993unspEDI_255230357 SMGEISYEEE0.991unsp

EDI_255230      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India