EDI_277000 | hypothetical protein

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
EDI_277000OTHER0.9987800.0004290.000791
No Results

  • Fasta :-

    >EDI_277000 MSASTKTSKITQSSVLICDGLPVGIPVASVSKLTLFLKRMVLIKNGAELSEQPNNVIVFV DETSQKTTGIGFIDFKDDEAAIKFKTRFVELKFDNKNTLKFYTKKEIDEILKESDEYTPL VFNPIEVTDFKGWLKEDKYTEGNECFATFQYGKTISLGWYNPSIPKEITMQEEQPFISSN CSFSPSGTFLYSITEHGLIVVQPDCKKKFQFPHSGLTHVTISPHDTFIATYSATAPYNRH IIVWDRRFTKGIKFFDLKAKYVNPIKMQFGIMAYQHSKKGDSLFPTLHIYDISSNETKLI SSLPNIEAKSFIYSPNGQFMVVSGINTSEPYLYFYNTDRMKLYKKVPIENMSYICWDPMG LFLGAVRSYVYSPHAKNGFMLYDCFGNLQFETYKTNFAGLLWRPQPTNIIKPEMAKEVES KFNECLKTMKEEDERKKEQIELEKKQRADELMKRFRNIVQKNVQLSAKEHLRAYDSGMKI IVEEIKQKAESNEEVKENITETQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_277000.fa Sequence name : EDI_277000 Sequence length : 503 VALUES OF COMPUTED PARAMETERS Coef20 : 4.358 CoefTot : -0.274 ChDiff : 3 ZoneTo : 47 KR : 6 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.271 1.682 0.295 0.603 MesoH : -0.240 0.420 -0.355 0.215 MuHd_075 : 21.961 15.235 5.482 5.673 MuHd_095 : 22.128 14.249 6.290 5.407 MuHd_100 : 24.477 16.323 8.451 5.331 MuHd_105 : 32.180 18.661 10.353 6.334 Hmax_075 : 18.317 18.783 2.927 5.787 Hmax_095 : 16.450 17.500 4.772 5.670 Hmax_100 : 16.200 18.600 5.383 5.570 Hmax_105 : 12.775 22.800 4.086 5.408 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5736 0.4264 DFMC : 0.5588 0.4412
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 503 EDI_277000 MSASTKTSKITQSSVLICDGLPVGIPVASVSKLTLFLKRMVLIKNGAELSEQPNNVIVFVDETSQKTTGIGFIDFKDDEA 80 AIKFKTRFVELKFDNKNTLKFYTKKEIDEILKESDEYTPLVFNPIEVTDFKGWLKEDKYTEGNECFATFQYGKTISLGWY 160 NPSIPKEITMQEEQPFISSNCSFSPSGTFLYSITEHGLIVVQPDCKKKFQFPHSGLTHVTISPHDTFIATYSATAPYNRH 240 IIVWDRRFTKGIKFFDLKAKYVNPIKMQFGIMAYQHSKKGDSLFPTLHIYDISSNETKLISSLPNIEAKSFIYSPNGQFM 320 VVSGINTSEPYLYFYNTDRMKLYKKVPIENMSYICWDPMGLFLGAVRSYVYSPHAKNGFMLYDCFGNLQFETYKTNFAGL 400 LWRPQPTNIIKPEMAKEVESKFNECLKTMKEEDERKKEQIELEKKQRADELMKRFRNIVQKNVQLSAKEHLRAYDSGMKI 480 IVEEIKQKAESNEEVKENITETQ 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_277000 6 -MSASTK|TS 0.069 . EDI_277000 9 ASTKTSK|IT 0.064 . EDI_277000 32 PVASVSK|LT 0.057 . EDI_277000 38 KLTLFLK|RM 0.056 . EDI_277000 39 LTLFLKR|MV 0.222 . EDI_277000 44 KRMVLIK|NG 0.063 . EDI_277000 66 VDETSQK|TT 0.079 . EDI_277000 76 IGFIDFK|DD 0.077 . EDI_277000 83 DDEAAIK|FK 0.061 . EDI_277000 85 EAAIKFK|TR 0.069 . EDI_277000 87 AIKFKTR|FV 0.207 . EDI_277000 92 TRFVELK|FD 0.078 . EDI_277000 96 ELKFDNK|NT 0.055 . EDI_277000 100 DNKNTLK|FY 0.075 . EDI_277000 104 TLKFYTK|KE 0.065 . EDI_277000 105 LKFYTKK|EI 0.151 . EDI_277000 112 EIDEILK|ES 0.057 . EDI_277000 131 IEVTDFK|GW 0.064 . EDI_277000 135 DFKGWLK|ED 0.056 . EDI_277000 138 GWLKEDK|YT 0.081 . EDI_277000 153 ATFQYGK|TI 0.065 . EDI_277000 166 YNPSIPK|EI 0.071 . EDI_277000 206 VVQPDCK|KK 0.061 . EDI_277000 207 VQPDCKK|KF 0.068 . EDI_277000 208 QPDCKKK|FQ 0.118 . EDI_277000 239 ATAPYNR|HI 0.093 . EDI_277000 246 HIIVWDR|RF 0.097 . EDI_277000 247 IIVWDRR|FT 0.153 . EDI_277000 250 WDRRFTK|GI 0.137 . EDI_277000 253 RFTKGIK|FF 0.059 . EDI_277000 258 IKFFDLK|AK 0.060 . EDI_277000 260 FFDLKAK|YV 0.115 . EDI_277000 266 KYVNPIK|MQ 0.062 . EDI_277000 278 MAYQHSK|KG 0.067 . EDI_277000 279 AYQHSKK|GD 0.109 . EDI_277000 298 ISSNETK|LI 0.080 . EDI_277000 309 LPNIEAK|SF 0.118 . EDI_277000 339 YFYNTDR|MK 0.069 . EDI_277000 341 YNTDRMK|LY 0.060 . EDI_277000 344 DRMKLYK|KV 0.090 . EDI_277000 345 RMKLYKK|VP 0.078 . EDI_277000 367 LFLGAVR|SY 0.091 . EDI_277000 376 VYSPHAK|NG 0.070 . EDI_277000 394 LQFETYK|TN 0.071 . EDI_277000 403 FAGLLWR|PQ 0.074 . EDI_277000 411 QPTNIIK|PE 0.069 . EDI_277000 416 IKPEMAK|EV 0.084 . EDI_277000 421 AKEVESK|FN 0.080 . EDI_277000 427 KFNECLK|TM 0.059 . EDI_277000 430 ECLKTMK|EE 0.057 . EDI_277000 435 MKEEDER|KK 0.100 . EDI_277000 436 KEEDERK|KE 0.073 . EDI_277000 437 EEDERKK|EQ 0.083 . EDI_277000 444 EQIELEK|KQ 0.062 . EDI_277000 445 QIELEKK|QR 0.086 . EDI_277000 447 ELEKKQR|AD 0.088 . EDI_277000 453 RADELMK|RF 0.057 . EDI_277000 454 ADELMKR|FR 0.168 . EDI_277000 456 ELMKRFR|NI 0.117 . EDI_277000 461 FRNIVQK|NV 0.088 . EDI_277000 468 NVQLSAK|EH 0.064 . EDI_277000 472 SAKEHLR|AY 0.117 . EDI_277000 479 AYDSGMK|II 0.057 . EDI_277000 486 IIVEEIK|QK 0.062 . EDI_277000 488 VEEIKQK|AE 0.070 . EDI_277000 496 ESNEEVK|EN 0.068 . ____________________________^_________________

  • Fasta :-

    >EDI_277000 ATGAGTGCTTCAACTAAAACGTCTAAAATTACACAATCCTCTGTACTTATCTGTGATGGA CTTCCAGTAGGAATTCCTGTTGCTTCAGTTTCTAAATTAACATTATTCTTAAAAAGAATG GTATTGATAAAGAATGGAGCAGAATTATCTGAACAACCAAATAATGTAATAGTTTTTGTT GATGAAACAAGCCAAAAAACTACAGGGATTGGGTTTATTGATTTTAAAGATGATGAAGCA GCAATAAAATTTAAAACAAGATTTGTTGAATTAAAATTTGATAATAAAAATACGTTAAAG TTTTATACTAAAAAAGAAATTGATGAAATTTTAAAAGAAAGTGATGAATATACACCATTA GTCTTTAATCCAATTGAAGTTACTGATTTTAAAGGATGGCTTAAAGAAGATAAATATACT GAAGGAAATGAATGTTTTGCAACATTTCAATATGGAAAAACTATTTCATTAGGATGGTAT AACCCAAGTATTCCAAAAGAAATAACAATGCAAGAAGAACAACCATTTATATCATCTAAT TGTTCATTTTCACCATCAGGTACATTTTTATATTCAATTACTGAACATGGATTAATTGTA GTTCAACCAGATTGTAAAAAGAAGTTCCAATTTCCACATTCAGGATTAACACATGTTACT ATTTCACCACATGATACATTTATTGCTACATATTCAGCTACAGCACCTTATAATAGACAT ATTATTGTTTGGGATAGAAGATTTACAAAAGGTATTAAATTCTTTGATTTAAAAGCAAAA TATGTTAATCCAATAAAAATGCAATTTGGTATTATGGCATATCAACATAGTAAAAAAGGA GATTCATTATTCCCAACATTACATATTTATGATATTAGTAGTAATGAAACTAAATTAATT TCATCACTTCCTAATATCGAAGCTAAATCATTTATTTATTCACCAAATGGACAATTTATG GTAGTAAGTGGAATTAATACATCAGAACCATATTTATATTTCTATAATACTGATAGAATG AAATTATATAAAAAAGTTCCAATTGAAAATATGAGTTATATTTGTTGGGATCCAATGGGA TTATTCCTTGGTGCAGTTCGTTCATATGTTTATTCTCCACATGCAAAGAATGGATTTATG TTATATGATTGTTTTGGAAATTTACAATTTGAAACATACAAAACTAATTTTGCTGGATTA TTATGGAGACCACAACCAACAAATATTATTAAACCTGAAATGGCTAAAGAAGTTGAAAGT AAATTTAATGAATGTTTAAAGACAATGAAAGAAGAAGATGAACGAAAGAAAGAACAAATT GAATTAGAAAAGAAACAAAGAGCTGATGAATTAATGAAAAGGTTCAGAAATATTGTTCAA AAGAATGTTCAATTATCTGCTAAAGAACATTTAAGAGCTTATGATTCTGGAATGAAAATT ATTGTTGAAGAAATTAAACAAAAGGCAGAATCTAATGAAGAAGTAAAAGAAAATATAACA GAAACTCAGTAA
  • Download Fasta

  • Fasta :-

    MSASTKTSKITQSSVLICDGLPVGIPVASVSKLTLFLKRMVLIKNGAELSEQPNNVIVFV DETSQKTTGIGFIDFKDDEAAIKFKTRFVELKFDNKNTLKFYTKKEIDEILKESDEYTPL VFNPIEVTDFKGWLKEDKYTEGNECFATFQYGKTISLGWYNPSIPKEITMQEEQPFISSN CSFSPSGTFLYSITEHGLIVVQPDCKKKFQFPHSGLTHVTISPHDTFIATYSATAPYNRH IIVWDRRFTKGIKFFDLKAKYVNPIKMQFGIMAYQHSKKGDSLFPTLHIYDISSNETKLI SSLPNIEAKSFIYSPNGQFMVVSGINTSEPYLYFYNTDRMKLYKKVPIENMSYICWDPMG LFLGAVRSYVYSPHAKNGFMLYDCFGNLQFETYKTNFAGLLWRPQPTNIIKPEMAKEVES KFNECLKTMKEEDERKKEQIELEKKQRADELMKRFRNIVQKNVQLSAKEHLRAYDSGMKI IVEEIKQKAESNEEVKENITETQ

  • title: WD40 repeat
  • coordinates: S178-F211
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EDI_277000S20.5090.057EDI_277000T5020.5040.029
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EDI_277000S20.5090.057EDI_277000T5020.5040.029
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_277000466 SNVQLSAKEH0.997unspEDI_277000466 SNVQLSAKEH0.997unspEDI_277000466 SNVQLSAKEH0.997unspEDI_277000491 SQKAESNEEV0.997unspEDI_277000184 SNCSFSPSGT0.994unspEDI_277000222 SHVTISPHDT0.998unsp

EDI_277000      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India