EDI_284390 | chaperone Clpb, putative

UniProt_ID: B0E7D1

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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	EDI_284390	OTHER	0.992476	0.000237	0.007286

No Results

Fasta :-
>EDI_284390 MDAANILKPMLSRGELRCIGATTIEEYRKYVEKDPAFERRFQQVYVNEPSEEDTLYILRG IREKYENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEI DKLERRETQLNVEKIALERDIKESDEDHNKMIKERLQDIEKELSENKEKLTKLRINYEKE KGGSEEMKELATKIEAMKHKAESTKDLEVAADLKYYAIPEAEKRMKELKEQNKETTMISL QVTPTQIEEVVSRWTGIPVTKMNQTEKIRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRG GLGNEKRPT
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_284390.fa Sequence name : EDI_284390 Sequence length : 309 VALUES OF COMPUTED PARAMETERS Coef20 : 3.988 CoefTot : 0.000 ChDiff : -6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.906 0.929 0.072 0.401 MesoH : -1.662 -0.242 -0.635 0.007 MuHd_075 : 25.564 15.011 3.749 6.789 MuHd_095 : 27.725 18.405 8.488 6.616 MuHd_100 : 24.117 16.079 7.665 4.919 MuHd_105 : 15.980 13.139 5.352 2.559 Hmax_075 : 3.500 7.875 -0.082 2.637 Hmax_095 : 7.437 12.600 1.998 4.279 Hmax_100 : 15.200 15.200 3.882 4.850 Hmax_105 : 4.800 9.500 0.866 2.730 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7419 0.2581 DFMC : 0.7740 0.2260

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 309 EDI_284390 MDAANILKPMLSRGELRCIGATTIEEYRKYVEKDPAFERRFQQVYVNEPSEEDTLYILRGIREKYENHYGLTITDSALVS 80 AATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDKLERRETQLNVEKIALERDIKESDEDHNKMIKERLQDIE 160 KELSENKEKLTKLRINYEKEKGGSEEMKELATKIEAMKHKAESTKDLEVAADLKYYAIPEAEKRMKELKEQNKETTMISL 240 QVTPTQIEEVVSRWTGIPVTKMNQTEKIRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPT 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_284390 8 DAANILK|PM 0.056 . EDI_284390 13 LKPMLSR|GE 0.080 . EDI_284390 17 LSRGELR|CI 0.133 . EDI_284390 28 TTIEEYR|KY 0.081 . EDI_284390 29 TIEEYRK|YV 0.134 . EDI_284390 33 YRKYVEK|DP 0.076 . EDI_284390 39 KDPAFER|RF 0.083 . EDI_284390 40 DPAFERR|FQ 0.200 . EDI_284390 59 DTLYILR|GI 0.080 . EDI_284390 62 YILRGIR|EK 0.128 . EDI_284390 64 LRGIREK|YE 0.075 . EDI_284390 86 SAATLSK|RY 0.063 . EDI_284390 87 AATLSKR|YI 0.157 . EDI_284390 92 KRYINGR|FL 0.120 . EDI_284390 97 GRFLPDK|AI 0.080 . EDI_284390 113 ATLFTQK|NS 0.062 . EDI_284390 122 QPEEIDK|LE 0.058 . EDI_284390 125 EIDKLER|RE 0.067 . EDI_284390 126 IDKLERR|ET 0.113 . EDI_284390 134 TQLNVEK|IA 0.059 . EDI_284390 139 EKIALER|DI 0.105 . EDI_284390 142 ALERDIK|ES 0.109 . EDI_284390 150 SDEDHNK|MI 0.069 . EDI_284390 153 DHNKMIK|ER 0.058 . EDI_284390 155 NKMIKER|LQ 0.102 . EDI_284390 161 RLQDIEK|EL 0.062 . EDI_284390 167 KELSENK|EK 0.056 . EDI_284390 169 LSENKEK|LT 0.066 . EDI_284390 172 NKEKLTK|LR 0.060 . EDI_284390 174 EKLTKLR|IN 0.111 . EDI_284390 179 LRINYEK|EK 0.094 . EDI_284390 181 INYEKEK|GG 0.075 . EDI_284390 188 GGSEEMK|EL 0.100 . EDI_284390 193 MKELATK|IE 0.061 . EDI_284390 198 TKIEAMK|HK 0.069 . EDI_284390 200 IEAMKHK|AE 0.083 . EDI_284390 205 HKAESTK|DL 0.100 . EDI_284390 214 EVAADLK|YY 0.060 . EDI_284390 223 AIPEAEK|RM 0.052 . EDI_284390 224 IPEAEKR|MK 0.233 . EDI_284390 226 EAEKRMK|EL 0.069 . EDI_284390 229 KRMKELK|EQ 0.079 . EDI_284390 233 ELKEQNK|ET 0.065 . EDI_284390 253 IEEVVSR|WT 0.117 . EDI_284390 261 TGIPVTK|MN 0.069 . EDI_284390 267 KMNQTEK|IR 0.065 . EDI_284390 269 NQTEKIR|LM 0.074 . EDI_284390 272 EKIRLMK|LE 0.110 . EDI_284390 279 LEEELHK|RV 0.070 . EDI_284390 280 EEELHKR|VI 0.274 . EDI_284390 297 VSDAIIR|SR 0.116 . EDI_284390 299 DAIIRSR|GG 0.084 . EDI_284390 306 GGLGNEK|RP 0.054 . EDI_284390 307 GLGNEKR|PT 0.225 . ____________________________^_________________

Fasta :-
>EDI_284390 ATGGATGCAGCTAATATTTTAAAACCAATGTTATCAAGAGGAGAATTACGATGTATTGGA GCAACAACAATAGAAGAATATAGAAAATATGTAGAAAAAGATCCAGCATTTGAAAGACGA TTCCAACAAGTTTATGTAAATGAGCCAAGTGAAGAAGATACATTATATATTCTTCGAGGA ATACGAGAGAAATATGAAAATCATTATGGATTAACAATTACCGATTCAGCATTAGTTTCA GCAGCAACATTAAGTAAAAGATATATTAATGGAAGATTTCTTCCAGATAAAGCAATTGAT TTAGTTGATGAAGCATGTGCTACATTATTTACACAAAAGAATTCACAACCAGAAGAAATA GATAAATTAGAAAGAAGAGAAACACAATTAAATGTAGAGAAAATAGCATTAGAAAGAGAC ATTAAAGAAAGTGATGAAGACCATAATAAAATGATTAAAGAAAGACTACAAGATATTGAA AAAGAATTAAGTGAAAATAAAGAGAAATTAACAAAATTACGAATTAACTATGAAAAAGAA AAAGGAGGAAGTGAAGAAATGAAAGAACTTGCAACGAAAATAGAAGCTATGAAACATAAA GCAGAAAGTACTAAAGATTTAGAAGTAGCAGCTGATTTAAAATATTATGCAATACCAGAA GCAGAAAAAAGAATGAAAGAATTAAAGGAACAAAATAAAGAAACAACAATGATATCATTA CAAGTTACACCAACACAAATAGAAGAAGTAGTTAGTAGATGGACAGGAATTCCTGTTACT AAAATGAATCAAACAGAGAAAATAAGACTAATGAAATTAGAAGAAGAACTACATAAACGA GTAATAGGACAAAATGAAGCAGTAACAGCAGTTAGTGATGCAATTATTCGAAGTAGAGGA GGATTAGGAAATGAAAAACGACCAACAGG
Download Fasta

Fasta :-

MDAANILKPMLSRGELRCIGATTIEEYRKYVEKDPAFERRFQQVYVNEPSEEDTLYILRG IREKYENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEI DKLERRETQLNVEKIALERDIKESDEDHNKMIKERLQDIEKELSENKEKLTKLRINYEKE KGGSEEMKELATKIEAMKHKAESTKDLEVAADLKYYAIPEAEKRMKELKEQNKETTMISL QVTPTQIEEVVSRWTGIPVTKMNQTEKIRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRG GLGNEKRPT

Extended AAA-ATPase domain

No Results

	ID	Site	Position	Gscore	Iscore
	EDI_284390	T	309	0.555	0.317

	ID	Site	Position	Gscore	Iscore
	EDI_284390	T	309	0.555	0.317

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	EDI_284390	184 S	EKGGSEEMK	0.993	unsp	EDI_284390	184 S	EKGGSEEMK	0.993	unsp	EDI_284390	184 S	EKGGSEEMK	0.993	unsp	EDI_284390	203 S	HKAESTKDL	0.998	unsp	EDI_284390	50 S	VNEPSEEDT	0.996	unsp	EDI_284390	144 S	DIKESDEDH	0.997	unsp

EDI_284390 | chaperone Clpb, putative

ID's

UniProt_ID: B0E7D1

GEO Functions

Computed_GO_Component_IDs:

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Extended AAA-ATPase domain

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

EDI_284390

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India