EDI_307680 | 26S proteasome regulatory subunit 7, psd7, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_307680OTHER0.9899790.0093330.000688
No Results

  • Fasta :-

    >EDI_307680 MTEPLQSSYIKKVIVHPLVLLSISDHQTRANKEGKRVVGVLLGFIRKGVVDVMNSFAVPF DEDEKDNIWYLDHQYLETVYRMTQRVTAKEVLVGWYSTSSSIKPCDIQIHSVINKYTAHP IYLTVDVSATISHDLPVHSYVSAESIDSSENILLQPELSLRFIHVPTDVGSDESEVGVER LLRDLQKPTGTVLKHEVELKMDSLRALDDKIKLMRNYLELVESGKIPVNQKIIQNIQDIF NLSPNIEKYTQQFAVNINDVMVTIYLSQLVKSVLAVHDLIRNKNDYEFKLKQLHDNNNKE STKDDTQQQQPVVQK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_307680.fa Sequence name : EDI_307680 Sequence length : 315 VALUES OF COMPUTED PARAMETERS Coef20 : 3.711 CoefTot : -0.580 ChDiff : -7 ZoneTo : 24 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.741 0.078 0.527 MesoH : -0.436 0.228 -0.369 0.211 MuHd_075 : 31.868 29.908 11.208 9.030 MuHd_095 : 15.364 11.948 5.913 4.110 MuHd_100 : 14.578 8.972 4.969 3.548 MuHd_105 : 14.434 10.237 4.532 3.952 Hmax_075 : 16.300 23.700 4.225 7.460 Hmax_095 : 14.800 16.500 3.339 4.926 Hmax_100 : 14.800 18.400 3.339 6.040 Hmax_105 : 13.475 8.517 2.818 5.670 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9687 0.0313 DFMC : 0.9728 0.0272
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 315 EDI_307680 MTEPLQSSYIKKVIVHPLVLLSISDHQTRANKEGKRVVGVLLGFIRKGVVDVMNSFAVPFDEDEKDNIWYLDHQYLETVY 80 RMTQRVTAKEVLVGWYSTSSSIKPCDIQIHSVINKYTAHPIYLTVDVSATISHDLPVHSYVSAESIDSSENILLQPELSL 160 RFIHVPTDVGSDESEVGVERLLRDLQKPTGTVLKHEVELKMDSLRALDDKIKLMRNYLELVESGKIPVNQKIIQNIQDIF 240 NLSPNIEKYTQQFAVNINDVMVTIYLSQLVKSVLAVHDLIRNKNDYEFKLKQLHDNNNKESTKDDTQQQQPVVQK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_307680 11 LQSSYIK|KV 0.084 . EDI_307680 12 QSSYIKK|VI 0.126 . EDI_307680 29 ISDHQTR|AN 0.106 . EDI_307680 32 HQTRANK|EG 0.098 . EDI_307680 35 RANKEGK|RV 0.100 . EDI_307680 36 ANKEGKR|VV 0.262 . EDI_307680 46 VLLGFIR|KG 0.069 . EDI_307680 47 LLGFIRK|GV 0.139 . EDI_307680 65 PFDEDEK|DN 0.066 . EDI_307680 81 YLETVYR|MT 0.103 . EDI_307680 85 VYRMTQR|VT 0.088 . EDI_307680 89 TQRVTAK|EV 0.097 . EDI_307680 103 STSSSIK|PC 0.098 . EDI_307680 115 IHSVINK|YT 0.075 . EDI_307680 161 QPELSLR|FI 0.098 . EDI_307680 180 SEVGVER|LL 0.084 . EDI_307680 183 GVERLLR|DL 0.304 . EDI_307680 187 LLRDLQK|PT 0.116 . EDI_307680 194 PTGTVLK|HE 0.058 . EDI_307680 200 KHEVELK|MD 0.058 . EDI_307680 205 LKMDSLR|AL 0.157 . EDI_307680 210 LRALDDK|IK 0.059 . EDI_307680 212 ALDDKIK|LM 0.061 . EDI_307680 215 DKIKLMR|NY 0.084 . EDI_307680 225 ELVESGK|IP 0.057 . EDI_307680 231 KIPVNQK|II 0.069 . EDI_307680 248 LSPNIEK|YT 0.066 . EDI_307680 271 YLSQLVK|SV 0.114 . EDI_307680 281 AVHDLIR|NK 0.099 . EDI_307680 283 HDLIRNK|ND 0.055 . EDI_307680 289 KNDYEFK|LK 0.058 . EDI_307680 291 DYEFKLK|QL 0.068 . EDI_307680 299 LHDNNNK|ES 0.059 . EDI_307680 303 NNKESTK|DD 0.085 . EDI_307680 315 QQPVVQK|-- 0.068 . ____________________________^_________________

  • Fasta :-

    >EDI_307680 ATGACAGAACCACTTCAAAGCAGTTATATCAAAAAAGTTATTGTACATCCATTAGTGTTA TTGAGTATTTCTGATCATCAAACAAGAGCTAATAAAGAAGGGAAACGTGTTGTTGGAGTA TTATTAGGATTTATAAGAAAAGGAGTTGTTGATGTAATGAATTCATTTGCTGTACCATTT GATGAAGATGAAAAAGATAATATTTGGTATTTAGATCATCAATATTTAGAAACAGTGTAT CGTATGACACAAAGAGTAACAGCAAAAGAAGTATTAGTTGGATGGTATTCTACTTCTTCA TCAATAAAACCATGTGACATTCAGATACATTCAGTGATTAATAAATATACTGCACATCCT ATTTATCTTACAGTGGATGTATCAGCTACTATATCTCATGATCTTCCAGTTCATTCATAT GTTTCAGCAGAATCAATTGATTCATCAGAAAATATTCTTCTTCAACCAGAACTTTCATTA AGATTTATTCATGTTCCAACAGATGTTGGATCTGATGAATCAGAAGTTGGTGTAGAACGT TTATTAAGAGACCTTCAAAAACCTACTGGAACTGTTTTAAAACATGAAGTTGAATTAAAA ATGGATTCATTAAGAGCATTAGATGATAAAATTAAATTAATGAGAAATTATTTAGAATTA GTTGAATCAGGAAAAATTCCAGTTAATCAAAAGATTATTCAAAATATCCAAGACATTTTT AATTTATCACCAAATATTGAAAAATATACACAACAATTTGCAGTTAATATAAATGATGTA ATGGTAACTATTTATCTCTCACAATTAGTTAAATCAGTTCTTGCTGTTCATGATTTAATC AGAAATAAGAATGATTATGAATTTAAATTAAAACAACTTCATGATAATAATAATAAAGAA TCAACTAAAGATGATACTCAACAACAGCAACCAGTTGTTCAAAAATAA
  • Download Fasta

  • Fasta :-

    MTEPLQSSYIKKVIVHPLVLLSISDHQTRANKEGKRVVGVLLGFIRKGVVDVMNSFAVPF DEDEKDNIWYLDHQYLETVYRMTQRVTAKEVLVGWYSTSSSIKPCDIQIHSVINKYTAHP IYLTVDVSATISHDLPVHSYVSAESIDSSENILLQPELSLRFIHVPTDVGSDESEVGVER LLRDLQKPTGTVLKHEVELKMDSLRALDDKIKLMRNYLELVESGKIPVNQKIIQNIQDIF NLSPNIEKYTQQFAVNINDVMVTIYLSQLVKSVLAVHDLIRNKNDYEFKLKQLHDNNNKE STKDDTQQQQPVVQK

    No Results
    No Results
IDSitePositionGscoreIscore
EDI_307680T20.5450.395
IDSitePositionGscoreIscore
EDI_307680T20.5450.395
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_30768083 TVYRMTQRVT0.993unspEDI_307680301 SNNKESTKDD0.997unsp

EDI_307680      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India