EDI_308990 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_308990OTHER0.9975710.0001950.002234
No Results

  • Fasta :-

    >EDI_308990 MESQPKLPFKQRVSFEERKAFAIQLRQKKPNYVPLVVESDGTSNAIDLKKDRFFIPEDSK VSDFVKVLVDKYIETDGETPISTVSVKIQTPSKAIQPSNEDTIGSLYAMYQEEDGYLYFI VYRESVFGY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_308990.fa Sequence name : EDI_308990 Sequence length : 129 VALUES OF COMPUTED PARAMETERS Coef20 : 3.605 CoefTot : -0.794 ChDiff : -3 ZoneTo : 15 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.035 0.706 -0.276 0.336 MesoH : -1.315 -0.175 -0.571 0.101 MuHd_075 : 27.256 8.747 6.830 3.332 MuHd_095 : 16.971 4.646 4.512 3.138 MuHd_100 : 13.591 2.526 3.376 2.168 MuHd_105 : 8.545 2.576 1.550 0.605 Hmax_075 : 2.800 1.400 -3.005 1.727 Hmax_095 : -12.800 -5.075 -5.565 -0.577 Hmax_100 : -10.100 -3.700 -5.103 0.040 Hmax_105 : -8.925 -1.167 -5.041 0.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9923 0.0077 DFMC : 0.9806 0.0194
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 129 EDI_308990 MESQPKLPFKQRVSFEERKAFAIQLRQKKPNYVPLVVESDGTSNAIDLKKDRFFIPEDSKVSDFVKVLVDKYIETDGETP 80 ISTVSVKIQTPSKAIQPSNEDTIGSLYAMYQEEDGYLYFIVYRESVFGY 160 ................................................................................ 80 ................................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_308990 6 -MESQPK|LP 0.064 . EDI_308990 10 QPKLPFK|QR 0.066 . EDI_308990 12 KLPFKQR|VS 0.108 . EDI_308990 18 RVSFEER|KA 0.128 . EDI_308990 19 VSFEERK|AF 0.092 . EDI_308990 26 AFAIQLR|QK 0.084 . EDI_308990 28 AIQLRQK|KP 0.060 . EDI_308990 29 IQLRQKK|PN 0.198 . EDI_308990 49 SNAIDLK|KD 0.061 . EDI_308990 50 NAIDLKK|DR 0.116 . EDI_308990 52 IDLKKDR|FF 0.103 . EDI_308990 60 FIPEDSK|VS 0.054 . EDI_308990 66 KVSDFVK|VL 0.067 . EDI_308990 71 VKVLVDK|YI 0.081 . EDI_308990 87 ISTVSVK|IQ 0.065 . EDI_308990 93 KIQTPSK|AI 0.071 . EDI_308990 123 LYFIVYR|ES 0.076 . ____________________________^_________________

  • Fasta :-

    >EDI_308990 ATGGAATCACAACCAAAACTCCCTTTTAAACAACGAGTTTCTTTTGAAGAACGTAAGGCA TTTGCTATTCAATTAAGACAAAAGAAACCAAATTATGTCCCACTTGTTGTTGAAAGTGAT GGAACTTCAAATGCTATTGATTTAAAGAAGGATAGATTCTTCATTCCTGAAGACTCAAAA GTTAGTGACTTTGTTAAAGTCTTAGTTGATAAATACATTGAAACTGATGGCGAAACTCCA ATTTCAACCGTTTCTGTTAAAATTCAAACACCAAGCAAAGCTATTCAACCATCAAATGAA GATACTATTGGATCACTTTATGCTATGTATCAAGAAGAAGATGGGTATCTTTATTTCATT GTTTACAGAGAATCTGTCTTTGGATATTAA
  • Download Fasta

  • Fasta :-

    MESQPKLPFKQRVSFEERKAFAIQLRQKKPNYVPLVVESDGTSNAIDLKKDRFFIPEDSK VSDFVKVLVDKYIETDGETPISTVSVKIQTPSKAIQPSNEDTIGSLYAMYQEEDGYLYFI VYRESVFGY

    No Results
    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EDI_308990T900.6400.054EDI_308990T830.5660.083
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EDI_308990T900.6400.054EDI_308990T830.5660.083
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_30899014 SKQRVSFEER0.998unspEDI_30899098 SAIQPSNEDT0.996unsp

EDI_308990      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India