EDI_312870 | chaperone protein ClpB, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:  GO:0019538      

  • Computed_GO_Processes:  protein metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_312870OTHER0.9999940.0000030.000003
No Results

  • Fasta :-

    >EDI_312870 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKL KKEIKETMNKIPVQNPPPVDIGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEEKE ISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYEALKKYGNDLTAQAESGKMDPII GRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNLQCRVIGLDM GALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAANILKP MLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVKEPSEENTLYILRGIREKYENHY GLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDKLERRETQ LNVEKIALERDIKESDEDHNKMIKERLQEIEKELSENKEKLTKLRINYEKEKGGSEEMKE LATKIEAMKHKAESTKDLEVAADLKYYGIPEAEKRMKELKGTNKETTMISLQVTPTQIEE VVKEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPTGSFMFLGPSGVGKTELAKALAV ELFDDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIE KAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLGSEIIMKGVEREGQVSRKVK ETVMEIVKKTFKPEFLNRLDDIIVFSPLSEKELKEIVKLQMGEVIKMIKKRYPLSEVEMT ESAIEGIIKSGYSIAYGARPMRRYIEKTVVTSITKSIISGIMKEKNKIQIDYENDKIQVK ITDK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_312870.fa Sequence name : EDI_312870 Sequence length : 844 VALUES OF COMPUTED PARAMETERS Coef20 : 3.362 CoefTot : 0.000 ChDiff : -6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.906 1.506 0.072 0.654 MesoH : -0.971 0.361 -0.444 0.208 MuHd_075 : 6.948 6.747 1.353 0.987 MuHd_095 : 26.723 9.083 6.318 4.329 MuHd_100 : 34.762 11.217 8.878 5.193 MuHd_105 : 40.299 13.996 10.479 5.744 Hmax_075 : -8.633 -2.333 -5.726 0.050 Hmax_095 : -0.787 -2.538 -3.819 1.208 Hmax_100 : 11.800 -0.000 -1.048 2.490 Hmax_105 : 11.800 1.050 -0.202 2.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9192 0.0808 DFMC : 0.9035 0.0965
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 844 EDI_312870 MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKLKKEIKETMNKIPVQNPPPVD 80 IGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEEKEISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYEAL 160 KKYGNDLTAQAESGKMDPIIGRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNLQCRVIGLDM 240 GALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAANILKPMLSRGELRCIGATTLEEYRK 320 YVEKDPAFERRFQQVYVKEPSEENTLYILRGIREKYENHYGLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATL 400 FTQKNSQPEEIDKLERRETQLNVEKIALERDIKESDEDHNKMIKERLQEIEKELSENKEKLTKLRINYEKEKGGSEEMKE 480 LATKIEAMKHKAESTKDLEVAADLKYYGIPEAEKRMKELKGTNKETTMISLQVTPTQIEEVVKEELHKRVIGQNEAVTAV 560 SDAIIRSRGGLGNEKRPTGSFMFLGPSGVGKTELAKALAVELFDDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGG 640 QLTEAIRRKPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLGSEIIMKGVEREGQVSRKVK 720 ETVMEIVKKTFKPEFLNRLDDIIVFSPLSEKELKEIVKLQMGEVIKMIKKRYPLSEVEMTESAIEGIIKSGYSIAYGARP 800 MRRYIEKTVVTSITKSIISGIMKEKNKIQIDYENDKIQVKITDK 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ............................................ 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_312870 5 --MDPNK|WT 0.079 . EDI_312870 15 ATVQMFK|ES 0.059 . EDI_312870 24 QEIAFER|KN 0.098 . EDI_312870 25 EIAFERK|NA 0.097 . EDI_312870 48 ESNIVIR|IV 0.202 . EDI_312870 59 MGGDVNK|LK 0.069 . EDI_312870 61 GDVNKLK|KE 0.069 . EDI_312870 62 DVNKLKK|EI 0.101 . EDI_312870 65 KLKKEIK|ET 0.074 . EDI_312870 70 IKETMNK|IP 0.057 . EDI_312870 92 TTQQVLR|RA 0.127 . EDI_312870 93 TQQVLRR|AI 0.348 . EDI_312870 97 LRRAIEK|QK 0.073 . EDI_312870 99 RAIEKQK|RM 0.071 . EDI_312870 100 AIEKQKR|MG 0.185 . EDI_312870 119 MSLMEEK|EI 0.076 . EDI_312870 133 NSGINVK|EF 0.068 . EDI_312870 137 NVKEFNK|KI 0.064 . EDI_312870 138 VKEFNKK|IT 0.116 . EDI_312870 143 KKITEMR|KG 0.096 . EDI_312870 144 KITEMRK|GQ 0.084 . EDI_312870 151 GQSVETK|EA 0.108 . EDI_312870 161 SQYEALK|KY 0.070 . EDI_312870 162 QYEALKK|YG 0.111 . EDI_312870 175 AQAESGK|MD 0.069 . EDI_312870 182 MDPIIGR|DE 0.107 . EDI_312870 187 GRDEEIK|RV 0.080 . EDI_312870 188 RDEEIKR|VI 0.121 . EDI_312870 191 EIKRVIR|IL 0.192 . EDI_312870 195 VIRILSR|RT 0.071 . EDI_312870 196 IRILSRR|TK 0.116 . EDI_312870 198 ILSRRTK|NN 0.135 . EDI_312870 211 GEPGVGK|TA 0.064 . EDI_312870 221 VEGLAQR|IV 0.098 . EDI_312870 224 LAQRIVK|GD 0.141 . EDI_312870 234 PSNLQCR|VI 0.106 . EDI_312870 250 IAGAQYR|GQ 0.110 . EDI_312870 256 RGQFEER|LK 0.083 . EDI_312870 258 QFEERLK|AV 0.076 . EDI_312870 262 RLKAVIK|EV 0.076 . EDI_312870 265 AVIKEVK|ES 0.056 . EDI_312870 268 KEVKESK|IP 0.061 . EDI_312870 299 DAANILK|PM 0.057 . EDI_312870 304 LKPMLSR|GE 0.080 . EDI_312870 308 LSRGELR|CI 0.133 . EDI_312870 319 TTLEEYR|KY 0.074 . EDI_312870 320 TLEEYRK|YV 0.140 . EDI_312870 324 YRKYVEK|DP 0.076 . EDI_312870 330 KDPAFER|RF 0.080 . EDI_312870 331 DPAFERR|FQ 0.198 . EDI_312870 338 FQQVYVK|EP 0.062 . EDI_312870 350 NTLYILR|GI 0.083 . EDI_312870 353 YILRGIR|EK 0.131 . EDI_312870 355 LRGIREK|YE 0.075 . EDI_312870 377 SAATLSK|RY 0.063 . EDI_312870 378 AATLSKR|YI 0.157 . EDI_312870 383 KRYINGR|FL 0.120 . EDI_312870 388 GRFLPDK|AI 0.080 . EDI_312870 404 ATLFTQK|NS 0.062 . EDI_312870 413 QPEEIDK|LE 0.058 . EDI_312870 416 EIDKLER|RE 0.067 . EDI_312870 417 IDKLERR|ET 0.113 . EDI_312870 425 TQLNVEK|IA 0.059 . EDI_312870 430 EKIALER|DI 0.105 . EDI_312870 433 ALERDIK|ES 0.109 . EDI_312870 441 SDEDHNK|MI 0.068 . EDI_312870 444 DHNKMIK|ER 0.060 . EDI_312870 446 NKMIKER|LQ 0.103 . EDI_312870 452 RLQEIEK|EL 0.061 . EDI_312870 458 KELSENK|EK 0.056 . EDI_312870 460 LSENKEK|LT 0.066 . EDI_312870 463 NKEKLTK|LR 0.060 . EDI_312870 465 EKLTKLR|IN 0.111 . EDI_312870 470 LRINYEK|EK 0.094 . EDI_312870 472 INYEKEK|GG 0.075 . EDI_312870 479 GGSEEMK|EL 0.100 . EDI_312870 484 MKELATK|IE 0.061 . EDI_312870 489 TKIEAMK|HK 0.069 . EDI_312870 491 IEAMKHK|AE 0.083 . EDI_312870 496 HKAESTK|DL 0.100 . EDI_312870 505 EVAADLK|YY 0.068 . EDI_312870 514 GIPEAEK|RM 0.052 . EDI_312870 515 IPEAEKR|MK 0.223 . EDI_312870 517 EAEKRMK|EL 0.066 . EDI_312870 520 KRMKELK|GT 0.099 . EDI_312870 524 ELKGTNK|ET 0.063 . EDI_312870 543 QIEEVVK|EE 0.060 . EDI_312870 548 VKEELHK|RV 0.074 . EDI_312870 549 KEELHKR|VI 0.334 . EDI_312870 566 VSDAIIR|SR 0.116 . EDI_312870 568 DAIIRSR|GG 0.084 . EDI_312870 575 GGLGNEK|RP 0.054 . EDI_312870 576 GLGNEKR|PT 0.235 . EDI_312870 591 GPSGVGK|TE 0.072 . EDI_312870 596 GKTELAK|AL 0.068 . EDI_312870 611 DEQNIVR|ID 0.074 . EDI_312870 625 ESHSVSR|LI 0.117 . EDI_312870 647 QLTEAIR|RK 0.067 . EDI_312870 648 LTEAIRR|KP 0.091 . EDI_312870 649 TEAIRRK|PY 0.137 . EDI_312870 661 LFDEIEK|AH 0.057 . EDI_312870 678 QLLDEGR|LT 0.089 . EDI_312870 683 GRLTDGR|GR 0.081 . EDI_312870 685 LTDGRGR|TV 0.106 . EDI_312870 690 GRTVDFK|NT 0.073 . EDI_312870 707 GSEIIMK|GV 0.103 . EDI_312870 711 IMKGVER|EG 0.084 . EDI_312870 717 REGQVSR|KV 0.123 . EDI_312870 718 EGQVSRK|VK 0.109 . EDI_312870 720 QVSRKVK|ET 0.192 . EDI_312870 728 TVMEIVK|KT 0.061 . EDI_312870 729 VMEIVKK|TF 0.097 . EDI_312870 732 IVKKTFK|PE 0.057 . EDI_312870 738 KPEFLNR|LD 0.108 . EDI_312870 751 FSPLSEK|EL 0.059 . EDI_312870 754 LSEKELK|EI 0.069 . EDI_312870 758 ELKEIVK|LQ 0.059 . EDI_312870 766 QMGEVIK|MI 0.065 . EDI_312870 769 EVIKMIK|KR 0.055 . EDI_312870 770 VIKMIKK|RY 0.077 . EDI_312870 771 IKMIKKR|YP 0.270 . EDI_312870 789 AIEGIIK|SG 0.071 . EDI_312870 799 SIAYGAR|PM 0.092 . EDI_312870 802 YGARPMR|RY 0.220 . EDI_312870 803 GARPMRR|YI 0.301 . EDI_312870 807 MRRYIEK|TV 0.098 . EDI_312870 815 VVTSITK|SI 0.072 . EDI_312870 823 IISGIMK|EK 0.074 . EDI_312870 825 SGIMKEK|NK 0.067 . EDI_312870 827 IMKEKNK|IQ 0.073 . EDI_312870 836 IDYENDK|IQ 0.060 . EDI_312870 840 NDKIQVK|IT 0.071 . EDI_312870 844 QVKITDK|-- 0.062 . ____________________________^_________________

  • Fasta :-

    >EDI_312870 ATGGACCCAAACAAATGGACAGATGCAACTGTTCAAATGTTCAAAGAATCACAAGAAATA GCATTTGAAAGAAAAAATGCATACATTATGCCAATTCATATGATGGAAGCAATTGTTGAA GAAGAATCAAATATTGTTATCCGAATAGTTGAAATGATGGGAGGTGATGTTAATAAATTA AAGAAAGAAATAAAAGAAACAATGAATAAAATCCCAGTTCAAAATCCACCACCAGTTGAT ATTGGACTTCATCCAACAACACAACAAGTATTAAGAAGAGCAATAGAGAAACAAAAAAGA ATGGGAGACTCATATCTTGCAATAGATGTAATTGTAATGTCATTAATGGAAGAGAAAGAA ATTAGTACAATAGTAGGAAATAGTGGAATTAATGTGAAAGAATTTAACAAAAAAATAACA GAAATGAGAAAAGGACAAAGTGTAGAAACAAAAGAAGCAGAAAGTCAGTATGAAGCATTA AAGAAATATGGAAATGATTTAACAGCACAAGCAGAAAGTGGAAAGATGGATCCAATTATT GGAAGAGATGAAGAAATTAAACGAGTTATTCGTATTTTATCAAGAAGAACAAAAAATAAT CCAGTATTAATAGGAGAACCAGGAGTAGGTAAAACAGCAGTAGTTGAAGGACTTGCACAA CGAATAGTTAAAGGAGATGTTCCAAGTAATTTACAATGTCGAGTTATTGGATTAGATATG GGAGCATTAATAGCAGGAGCACAATATAGAGGACAATTTGAAGAAAGATTAAAAGCAGTA ATAAAAGAAGTTAAAGAAAGTAAAATACCTATTATATTATTTATAGATGAAATTCATACA GTATTAGGAGCAGGAGCAACAGGAGAAGGAGCAATGGATGCAGCTAATATTTTAAAACCA ATGTTATCAAGAGGAGAATTACGATGTATTGGAGCAACAACATTAGAAGAATATAGAAAA TATGTAGAAAAAGATCCAGCATTTGAAAGACGATTCCAACAAGTTTATGTAAAAGAACCA AGTGAAGAAAATACATTATACATTCTTCGAGGAATACGAGAGAAATATGAAAATCATTAT GGATTAACAATTACCGATTCAGCATTAGTTTCAGCAGCAACGTTAAGTAAAAGATATATC AATGGAAGATTTCTTCCAGATAAAGCAATTGATTTAGTTGATGAAGCATGTGCTACATTA TTTACACAAAAGAATTCACAACCAGAAGAAATAGATAAATTAGAAAGAAGAGAAACACAA TTAAATGTAGAGAAAATAGCATTAGAAAGAGACATTAAAGAAAGTGATGAAGATCATAAT AAAATGATTAAAGAAAGACTACAAGAAATTGAAAAAGAATTAAGTGAAAATAAAGAGAAA TTAACAAAATTACGAATTAATTATGAAAAAGAAAAAGGAGGAAGTGAAGAAATGAAAGAA CTTGCAACAAAAATAGAAGCTATGAAACATAAAGCAGAAAGTACTAAAGATTTAGAAGTA GCAGCTGATTTAAAATATTATGGCATACCAGAAGCAGAAAAAAGAATGAAAGAATTAAAG GGAACAAATAAAGAAACAACAATGATATCATTACAAGTTACACCAACACAAATAGAAGAA GTAGTTAAAGAAGAACTACATAAACGAGTAATAGGACAAAATGAAGCAGTAACAGCAGTC AGTGATGCAATTATTCGAAGTAGAGGAGGATTAGGAAATGAAAAACGACCAACAGGTAGT TTTATGTTTTTAGGACCAAGTGGAGTAGGAAAAACCGAATTAGCAAAAGCATTAGCAGTT GAGTTATTTGATGACGAACAAAATATAGTTAGAATAGATATGAGTGAATATATGGAAAGT CATAGTGTATCAAGATTAATAGGAGCACCACCAGGATATGTAGGATATGAAGAAGGAGGA CAATTAACAGAGGCAATTCGTAGAAAACCATATAGTGTAATATTATTTGATGAAATTGAA AAAGCACATCCACAAGTATTTAATGTATTATTACAATTATTAGATGAAGGAAGATTAACA GATGGAAGAGGAAGAACAGTTGATTTTAAGAATACTATTGTTATTATGACATCAAATTTA GGAAGTGAAATAATAATGAAAGGAGTAGAAAGAGAAGGACAAGTTAGTAGAAAAGTTAAA GAAACAGTAATGGAAATAGTAAAGAAAACATTTAAACCAGAGTTTCTTAATAGATTAGAT GATATTATAGTATTCTCACCACTTTCAGAGAAAGAATTAAAAGAAATAGTTAAATTACAA ATGGGAGAAGTGATTAAAATGATTAAAAAGAGATATCCATTAAGTGAAGTAGAAATGACA GAATCAGCAATAGAAGGAATCATTAAATCAGGATATTCAATAGCATATGGAGCAAGACCA ATGCGACGATATATAGAAAAGACAGTAGTAACTTCAATAACAAAATCAATAATAAGTGGA ATAATGAAAGAGAAGAATAAAATTCAAATAGATTATGAAAATGATAAAATTCAAGTCAAA ATAACAGATAAATAA
  • Download Fasta

  • Fasta :-

    MDPNKWTDATVQMFKESQEIAFERKNAYIMPIHMMEAIVEEESNIVIRIVEMMGGDVNKL KKEIKETMNKIPVQNPPPVDIGLHPTTQQVLRRAIEKQKRMGDSYLAIDVIVMSLMEEKE ISTIVGNSGINVKEFNKKITEMRKGQSVETKEAESQYEALKKYGNDLTAQAESGKMDPII GRDEEIKRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNLQCRVIGLDM GALIAGAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAANILKP MLSRGELRCIGATTLEEYRKYVEKDPAFERRFQQVYVKEPSEENTLYILRGIREKYENHY GLTITDSALVSAATLSKRYINGRFLPDKAIDLVDEACATLFTQKNSQPEEIDKLERRETQ LNVEKIALERDIKESDEDHNKMIKERLQEIEKELSENKEKLTKLRINYEKEKGGSEEMKE LATKIEAMKHKAESTKDLEVAADLKYYGIPEAEKRMKELKGTNKETTMISLQVTPTQIEE VVKEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPTGSFMFLGPSGVGKTELAKALAV ELFDDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIE KAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLGSEIIMKGVEREGQVSRKVK ETVMEIVKKTFKPEFLNRLDDIIVFSPLSEKELKEIVKLQMGEVIKMIKKRYPLSEVEMT ESAIEGIIKSGYSIAYGARPMRRYIEKTVVTSITKSIISGIMKEKNKIQIDYENDKIQVK ITDK

  • title: ATP binding site
  • coordinates: E206,P207,G208,V209,G210,K211,T212,A213,D276,T314
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_312870341 SVKEPSEENT0.993unspEDI_312870341 SVKEPSEENT0.993unspEDI_312870341 SVKEPSEENT0.993unspEDI_312870435 SDIKESDEDH0.997unspEDI_312870475 SEKGGSEEMK0.993unspEDI_312870494 SHKAESTKDL0.998unspEDI_312870716 SEGQVSRKVK0.992unspEDI_312870749 SFSPLSEKEL0.996unspEDI_312870155 SKEAESQYEA0.997unspEDI_312870173 SAQAESGKMD0.994unsp

EDI_312870      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India