EDI_313300 | hypothetical protein, conserved

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No Results
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  • Fasta :-

    >EDI_313300 MTVLLFILISLCLAIECQKNEYKYDENTCIACPEECASGKCKEKVGCTQCNDGFYIDELG GCLPCADGCKTCDSKKCLSCVDLYYMKASGCYSGGDNCTAVQDNVGCTKCQTGYYLSSGV CTYAGEGCKTYSDNVGCTQVKEVNKYYIYGGQAIACDPACITCDEFSGCTKCKDGYYNYN HGCAVCHKTCSTCENSTSCVNCQDGLIKNNTGLCMGCDPNCEESCKSPSMCNKCKTGYFA FEGKCYLCDPRCATEKCNEDGCKECQDGYFVYHGRCEKKPYQCQPSKYSKSTGCSECNDG YYVVDGMCVACDPNCQPGHCNGTTGACDLCATGYRSYGQKECIEGTVYGDNTNIYRCDDK FFIDKDDGTCAKCSTYCTEGQCDNALGCSQCQPGFYVTKDGRCSSCPYFCDLCHEELGCL ECTEGSYQFEGRCVFSGAISVLGMLFTFIVFFAF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_313300.fa Sequence name : EDI_313300 Sequence length : 454 VALUES OF COMPUTED PARAMETERS Coef20 : 4.592 CoefTot : 0.863 ChDiff : -19 ZoneTo : 15 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.641 2.541 0.503 0.902 MesoH : -0.172 0.424 -0.106 0.241 MuHd_075 : 3.154 4.618 2.489 0.892 MuHd_095 : 2.066 6.222 0.941 1.391 MuHd_100 : 3.656 5.450 0.355 1.432 MuHd_105 : 7.256 5.656 1.350 1.362 Hmax_075 : 19.133 20.600 6.467 6.347 Hmax_095 : 19.200 27.100 6.338 7.490 Hmax_100 : 19.700 24.100 5.405 6.730 Hmax_105 : 18.400 20.300 5.167 5.880 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9971 0.0029 DFMC : 0.9937 0.0063
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 454 EDI_313300 MTVLLFILISLCLAIECQKNEYKYDENTCIACPEECASGKCKEKVGCTQCNDGFYIDELGGCLPCADGCKTCDSKKCLSC 80 VDLYYMKASGCYSGGDNCTAVQDNVGCTKCQTGYYLSSGVCTYAGEGCKTYSDNVGCTQVKEVNKYYIYGGQAIACDPAC 160 ITCDEFSGCTKCKDGYYNYNHGCAVCHKTCSTCENSTSCVNCQDGLIKNNTGLCMGCDPNCEESCKSPSMCNKCKTGYFA 240 FEGKCYLCDPRCATEKCNEDGCKECQDGYFVYHGRCEKKPYQCQPSKYSKSTGCSECNDGYYVVDGMCVACDPNCQPGHC 320 NGTTGACDLCATGYRSYGQKECIEGTVYGDNTNIYRCDDKFFIDKDDGTCAKCSTYCTEGQCDNALGCSQCQPGFYVTKD 400 GRCSSCPYFCDLCHEELGCLECTEGSYQFEGRCVFSGAISVLGMLFTFIVFFAF 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_313300 19 LAIECQK|NE 0.056 . EDI_313300 23 CQKNEYK|YD 0.062 . EDI_313300 40 EECASGK|CK 0.082 . EDI_313300 42 CASGKCK|EK 0.074 . EDI_313300 44 SGKCKEK|VG 0.066 . EDI_313300 70 PCADGCK|TC 0.059 . EDI_313300 75 CKTCDSK|KC 0.056 . EDI_313300 76 KTCDSKK|CL 0.107 . EDI_313300 87 VDLYYMK|AS 0.060 . EDI_313300 109 DNVGCTK|CQ 0.060 . EDI_313300 129 YAGEGCK|TY 0.064 . EDI_313300 141 VGCTQVK|EV 0.070 . EDI_313300 145 QVKEVNK|YY 0.074 . EDI_313300 171 EFSGCTK|CK 0.066 . EDI_313300 173 SGCTKCK|DG 0.082 . EDI_313300 188 GCAVCHK|TC 0.083 . EDI_313300 208 CQDGLIK|NN 0.058 . EDI_313300 226 NCEESCK|SP 0.082 . EDI_313300 233 SPSMCNK|CK 0.085 . EDI_313300 235 SMCNKCK|TG 0.072 . EDI_313300 244 YFAFEGK|CY 0.058 . EDI_313300 251 CYLCDPR|CA 0.082 . EDI_313300 256 PRCATEK|CN 0.078 . EDI_313300 263 CNEDGCK|EC 0.069 . EDI_313300 275 YFVYHGR|CE 0.078 . EDI_313300 278 YHGRCEK|KP 0.112 . EDI_313300 279 HGRCEKK|PY 0.108 . EDI_313300 287 YQCQPSK|YS 0.066 . EDI_313300 290 QPSKYSK|ST 0.171 . EDI_313300 335 LCATGYR|SY 0.222 . EDI_313300 340 YRSYGQK|EC 0.078 . EDI_313300 356 DNTNIYR|CD 0.083 . EDI_313300 360 IYRCDDK|FF 0.079 . EDI_313300 365 DKFFIDK|DD 0.075 . EDI_313300 372 DDGTCAK|CS 0.067 . EDI_313300 399 PGFYVTK|DG 0.064 . EDI_313300 402 YVTKDGR|CS 0.072 . EDI_313300 432 SYQFEGR|CV 0.162 . ____________________________^_________________

  • Fasta :-

    >EDI_313300 ATGACTGTTCTTTTGTTTATATTGATTTCATTGTGCTTAGCTATTGAATGTCAAAAGAAT GAATATAAATATGATGAAAATACGTGTATTGCATGTCCTGAAGAATGTGCTTCTGGTAAA TGTAAGGAAAAAGTTGGATGTACTCAATGTAATGATGGGTTTTATATTGATGAATTAGGA GGATGTCTTCCATGTGCTGATGGATGCAAAACGTGTGATTCAAAAAAATGTTTATCTTGT GTAGATCTTTATTATATGAAAGCTAGTGGATGTTATTCAGGAGGAGATAATTGTACTGCT GTTCAAGATAATGTTGGATGTACAAAATGTCAAACTGGTTATTATTTATCTTCTGGAGTA TGTACTTATGCAGGTGAAGGATGTAAAACATATTCTGATAATGTTGGATGTACACAAGTA AAAGAAGTTAATAAATATTATATTTATGGAGGACAAGCAATTGCATGTGATCCTGCATGT ATTACTTGTGATGAATTTAGTGGATGTACTAAATGTAAAGATGGATATTATAATTATAAT CATGGTTGTGCTGTTTGTCATAAAACATGTTCTACTTGTGAAAACAGTACCTCATGTGTA AATTGTCAAGATGGATTAATTAAAAATAATACAGGACTTTGTATGGGATGTGATCCAAAC TGTGAAGAAAGTTGTAAATCACCTTCTATGTGTAATAAATGTAAAACAGGTTATTTTGCA TTTGAAGGAAAATGTTATCTTTGTGATCCAAGATGTGCTACTGAAAAATGTAATGAAGAT GGATGTAAAGAATGTCAAGATGGATATTTTGTTTATCATGGAAGATGTGAAAAGAAACCA TACCAATGTCAACCTTCAAAATATTCAAAATCTACTGGATGTAGTGAATGTAATGATGGA TATTATGTTGTTGATGGTATGTGTGTTGCATGTGATCCTAATTGTCAACCAGGACATTGT AATGGTACAACTGGTGCATGTGATCTTTGTGCTACTGGATATCGATCATATGGACAGAAA GAATGTATTGAAGGTACAGTTTATGGAGACAATACAAATATTTATAGATGTGATGATAAA TTCTTTATAGATAAAGATGATGGTACTTGTGCTAAATGTTCTACTTATTGCACAGAAGGA CAATGTGATAATGCACTTGGATGTAGTCAATGTCAACCAGGATTTTATGTAACTAAAGAT GGTAGATGTTCATCTTGCCCATATTTCTGTGATCTTTGTCATGAAGAATTAGGTTGTTTA GAATGTACTGAAGGTTCTTATCAATTTGAAGGAAGATGTGTCTTTTCTGGAGCCATTTCT GTATTAGGTATGTTATTTACATTCATCGTTTTCTTTGCTTTCTAA
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  • Fasta :-

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EDI_313300      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India