EDI_313350 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
EDI_313350OTHER0.9999580.0000280.000013
No Results

  • Fasta :-

    >EDI_313350 MSKTPRERAGREPKMGKVGMLTIQFEDCKGSALGYIVCDVDHLTYITTKKKASKTLKIDE TLYFPINSARPNIHFFLYKPRLIGSKCVGFYQLNMADIKEGDEELHYVQSIKKPKNILEP DIGEVRPPEETGMGNDKKKKKKEKVLPQFKVSMKFTPIPVEEKKLDGIVLEGEWKKGFDS GNIISNPRWYENPQFLLTLTGKLHIKVCLKQDNINNRVTFFIVKYDQVFYENRPLTLFDP NEVIKIDENFLNTMASDNIEHSFELDAGSYVIIPTNLNRISSINPEPYHGKFKIAVSTEH MEAIEFIPIDYNKQWKFFEDSKKWTQTSNGGADRGSPYEFYHNYQYVIETKKDTKMSITM EQPDNKNKIGFYLFETKQTDRKEIDFGELVEETSNLISNVCVGKNFKLREGKYILVPCTS EAGEVGEFKLKIYYEEESVIIKELTKEWSNIVSVNGEWNEGTAGGSVDDPDSFIKNPQYL IKAKYNKEECKDIIILLSQFIGVSGKIESIGLPVFVNLEQRLDADDINEDNLVNLPEAWV RNRNVFTCFEVDEEDGLEVIVIPSTMKPNTFANFKITILTDVKDVTIEALE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_313350.fa Sequence name : EDI_313350 Sequence length : 591 VALUES OF COMPUTED PARAMETERS Coef20 : 3.514 CoefTot : -0.119 ChDiff : -15 ZoneTo : 6 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.841 1.394 0.053 0.586 MesoH : -0.999 0.216 -0.486 0.168 MuHd_075 : 37.276 15.702 9.445 6.049 MuHd_095 : 23.000 5.026 5.582 4.014 MuHd_100 : 26.132 9.758 7.056 4.481 MuHd_105 : 22.980 11.502 6.776 4.051 Hmax_075 : 0.467 -0.350 -2.779 1.167 Hmax_095 : -9.450 -6.900 -4.911 -0.385 Hmax_100 : -2.000 -4.200 -2.900 1.060 Hmax_105 : -2.100 -3.033 -2.857 1.097 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9012 0.0988 DFMC : 0.8276 0.1724
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 591 EDI_313350 MSKTPRERAGREPKMGKVGMLTIQFEDCKGSALGYIVCDVDHLTYITTKKKASKTLKIDETLYFPINSARPNIHFFLYKP 80 RLIGSKCVGFYQLNMADIKEGDEELHYVQSIKKPKNILEPDIGEVRPPEETGMGNDKKKKKKEKVLPQFKVSMKFTPIPV 160 EEKKLDGIVLEGEWKKGFDSGNIISNPRWYENPQFLLTLTGKLHIKVCLKQDNINNRVTFFIVKYDQVFYENRPLTLFDP 240 NEVIKIDENFLNTMASDNIEHSFELDAGSYVIIPTNLNRISSINPEPYHGKFKIAVSTEHMEAIEFIPIDYNKQWKFFED 320 SKKWTQTSNGGADRGSPYEFYHNYQYVIETKKDTKMSITMEQPDNKNKIGFYLFETKQTDRKEIDFGELVEETSNLISNV 400 CVGKNFKLREGKYILVPCTSEAGEVGEFKLKIYYEEESVIIKELTKEWSNIVSVNGEWNEGTAGGSVDDPDSFIKNPQYL 480 IKAKYNKEECKDIIILLSQFIGVSGKIESIGLPVFVNLEQRLDADDINEDNLVNLPEAWVRNRNVFTCFEVDEEDGLEVI 560 VIPSTMKPNTFANFKITILTDVKDVTIEALE 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_313350 3 ----MSK|TP 0.056 . EDI_313350 6 -MSKTPR|ER 0.104 . EDI_313350 8 SKTPRER|AG 0.081 . EDI_313350 11 PRERAGR|EP 0.245 . EDI_313350 14 RAGREPK|MG 0.167 . EDI_313350 17 REPKMGK|VG 0.055 . EDI_313350 29 IQFEDCK|GS 0.060 . EDI_313350 49 LTYITTK|KK 0.058 . EDI_313350 50 TYITTKK|KA 0.140 . EDI_313350 51 YITTKKK|AS 0.086 . EDI_313350 54 TKKKASK|TL 0.072 . EDI_313350 57 KASKTLK|ID 0.073 . EDI_313350 70 FPINSAR|PN 0.101 . EDI_313350 79 IHFFLYK|PR 0.062 . EDI_313350 81 FFLYKPR|LI 0.109 . EDI_313350 86 PRLIGSK|CV 0.083 . EDI_313350 99 LNMADIK|EG 0.069 . EDI_313350 112 HYVQSIK|KP 0.060 . EDI_313350 113 YVQSIKK|PK 0.095 . EDI_313350 115 QSIKKPK|NI 0.068 . EDI_313350 126 PDIGEVR|PP 0.080 . EDI_313350 137 TGMGNDK|KK 0.069 . EDI_313350 138 GMGNDKK|KK 0.101 . EDI_313350 139 MGNDKKK|KK 0.119 . EDI_313350 140 GNDKKKK|KK 0.210 . EDI_313350 141 NDKKKKK|KE 0.092 . EDI_313350 142 DKKKKKK|EK 0.095 . EDI_313350 144 KKKKKEK|VL 0.075 . EDI_313350 150 KVLPQFK|VS 0.056 . EDI_313350 154 QFKVSMK|FT 0.068 . EDI_313350 163 PIPVEEK|KL 0.062 . EDI_313350 164 IPVEEKK|LD 0.136 . EDI_313350 175 VLEGEWK|KG 0.062 . EDI_313350 176 LEGEWKK|GF 0.125 . EDI_313350 188 NIISNPR|WY 0.085 . EDI_313350 202 LLTLTGK|LH 0.058 . EDI_313350 206 TGKLHIK|VC 0.061 . EDI_313350 210 HIKVCLK|QD 0.060 . EDI_313350 217 QDNINNR|VT 0.099 . EDI_313350 224 VTFFIVK|YD 0.058 . EDI_313350 233 QVFYENR|PL 0.077 . EDI_313350 245 DPNEVIK|ID 0.080 . EDI_313350 279 IPTNLNR|IS 0.088 . EDI_313350 291 PEPYHGK|FK 0.074 . EDI_313350 293 PYHGKFK|IA 0.086 . EDI_313350 313 IPIDYNK|QW 0.072 . EDI_313350 316 DYNKQWK|FF 0.097 . EDI_313350 322 KFFEDSK|KW 0.059 . EDI_313350 323 FFEDSKK|WT 0.117 . EDI_313350 334 SNGGADR|GS 0.094 . EDI_313350 351 QYVIETK|KD 0.059 . EDI_313350 352 YVIETKK|DT 0.128 . EDI_313350 355 ETKKDTK|MS 0.064 . EDI_313350 366 MEQPDNK|NK 0.058 . EDI_313350 368 QPDNKNK|IG 0.066 . EDI_313350 377 FYLFETK|QT 0.069 . EDI_313350 381 ETKQTDR|KE 0.075 . EDI_313350 382 TKQTDRK|EI 0.123 . EDI_313350 404 SNVCVGK|NF 0.061 . EDI_313350 407 CVGKNFK|LR 0.056 . EDI_313350 409 GKNFKLR|EG 0.106 . EDI_313350 412 FKLREGK|YI 0.126 . EDI_313350 429 GEVGEFK|LK 0.064 . EDI_313350 431 VGEFKLK|IY 0.065 . EDI_313350 442 EESVIIK|EL 0.069 . EDI_313350 446 IIKELTK|EW 0.064 . EDI_313350 475 DPDSFIK|NP 0.059 . EDI_313350 482 NPQYLIK|AK 0.079 . EDI_313350 484 QYLIKAK|YN 0.070 . EDI_313350 487 IKAKYNK|EE 0.065 . EDI_313350 491 YNKEECK|DI 0.094 . EDI_313350 506 FIGVSGK|IE 0.078 . EDI_313350 521 FVNLEQR|LD 0.075 . EDI_313350 541 LPEAWVR|NR 0.078 . EDI_313350 543 EAWVRNR|NV 0.125 . EDI_313350 567 VIPSTMK|PN 0.058 . EDI_313350 575 NTFANFK|IT 0.056 . EDI_313350 583 TILTDVK|DV 0.072 . ____________________________^_________________

  • Fasta :-

    >EDI_313350 ATGTCTAAAACACCGAGAGAAAGAGCAGGAAGAGAACCAAAAATGGGAAAAGTAGGAATG CTTACCATTCAATTTGAAGATTGTAAGGGTAGTGCATTAGGATATATTGTATGTGATGTT GACCACCTAACATACATTACTACAAAAAAGAAAGCAAGTAAAACATTAAAGATAGATGAA ACATTATATTTTCCAATAAATAGTGCAAGACCAAACATTCATTTCTTTTTATATAAACCA CGTTTAATTGGAAGTAAATGTGTTGGATTTTATCAATTAAATATGGCAGATATAAAAGAA GGTGATGAAGAATTACATTACGTTCAAAGCATAAAGAAACCTAAAAACATTCTTGAGCCA GACATTGGAGAAGTTAGACCACCTGAAGAAACTGGAATGGGAAATGATAAAAAGAAAAAA AAGAAAGAAAAAGTATTACCACAATTTAAAGTTTCAATGAAATTTACACCAATTCCAGTA GAAGAAAAAAAATTAGATGGAATTGTTCTTGAAGGAGAATGGAAAAAAGGATTTGATTCA GGAAATATTATTTCAAATCCTAGATGGTATGAAAATCCACAATTTTTATTAACATTAACA GGAAAATTACATATTAAAGTATGTTTAAAACAAGATAATATTAATAATAGAGTTACATTC TTTATTGTTAAATATGACCAAGTATTTTATGAAAATAGACCATTAACTTTATTTGATCCA AATGAAGTTATTAAAATAGATGAAAATTTCTTAAATACTATGGCTTCTGATAATATTGAA CATTCATTTGAATTGGATGCTGGTTCTTATGTTATCATTCCAACTAATCTTAATAGAATT TCTAGTATTAATCCAGAACCTTATCATGGTAAATTCAAAATTGCTGTTTCAACAGAACAT ATGGAAGCTATTGAATTTATTCCAATTGATTATAACAAACAATGGAAATTCTTTGAAGAT AGTAAAAAGTGGACACAAACTAGTAATGGAGGAGCTGATAGAGGAAGTCCATATGAATTT TATCATAATTACCAATATGTAATAGAAACCAAGAAGGATACTAAAATGTCTATTACCATG GAACAACCTGATAATAAAAATAAAATTGGGTTTTATCTTTTTGAAACAAAACAAACTGAT AGAAAAGAAATTGATTTTGGTGAATTGGTTGAAGAAACTTCAAACTTGATTTCAAATGTT TGTGTTGGAAAGAATTTTAAATTAAGAGAAGGTAAATATATTTTAGTTCCATGTACTTCA GAAGCTGGAGAAGTTGGGGAATTTAAATTAAAAATTTATTATGAAGAAGAAAGTGTTATA ATTAAAGAATTAACAAAAGAATGGTCAAACATTGTTTCAGTTAATGGTGAATGGAACGAA GGAACAGCAGGAGGAAGTGTTGATGATCCAGATTCATTTATAAAAAATCCACAATATCTT ATTAAAGCAAAATACAATAAAGAAGAATGTAAAGACATTATCATTTTATTATCACAATTT ATTGGAGTGTCAGGAAAGATTGAAAGTATTGGATTACCAGTATTTGTTAATCTTGAACAA AGGTTAGATGCTGATGATATAAATGAAGATAATTTAGTTAATTTACCAGAGGCATGGGTA AGAAATAGAAATGTATTTACTTGTTTTGAAGTCGATGAAGAAGATGGATTAGAAGTTATT GTCATTCCATCAACAATGAAACCAAATACATTTGCTAATTTTAAAATTACTATTTTAACT GATGTGAAAGATGTGACAATTGAGGCATTAGAATAA
  • Download Fasta

  • Fasta :-

    MSKTPRERAGREPKMGKVGMLTIQFEDCKGSALGYIVCDVDHLTYITTKKKASKTLKIDE TLYFPINSARPNIHFFLYKPRLIGSKCVGFYQLNMADIKEGDEELHYVQSIKKPKNILEP DIGEVRPPEETGMGNDKKKKKKEKVLPQFKVSMKFTPIPVEEKKLDGIVLEGEWKKGFDS GNIISNPRWYENPQFLLTLTGKLHIKVCLKQDNINNRVTFFIVKYDQVFYENRPLTLFDP NEVIKIDENFLNTMASDNIEHSFELDAGSYVIIPTNLNRISSINPEPYHGKFKIAVSTEH MEAIEFIPIDYNKQWKFFEDSKKWTQTSNGGADRGSPYEFYHNYQYVIETKKDTKMSITM EQPDNKNKIGFYLFETKQTDRKEIDFGELVEETSNLISNVCVGKNFKLREGKYILVPCTS EAGEVGEFKLKIYYEEESVIIKELTKEWSNIVSVNGEWNEGTAGGSVDDPDSFIKNPQYL IKAKYNKEECKDIIILLSQFIGVSGKIESIGLPVFVNLEQRLDADDINEDNLVNLPEAWV RNRNVFTCFEVDEEDGLEVIVIPSTMKPNTFANFKITILTDVKDVTIEALE

    No Results
IDSitePositionGscoreIscore
EDI_313350T40.5140.029
IDSitePositionGscoreIscore
EDI_313350T40.5140.029
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_313350336 SADRGSPYEF0.997unspEDI_313350336 SADRGSPYEF0.997unspEDI_313350336 SADRGSPYEF0.997unspEDI_313350466 STAGGSVDDP0.993unspEDI_3133504 T#NAME?0.991unspEDI_313350152 SQFKVSMKFT0.994unsp

EDI_313350      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India