EDI_313840 | eukaryotic translation initiation factor 3 subunit, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
EDI_313840OTHER0.9987990.0004180.000782
No Results

  • Fasta :-

    >EDI_313840 MSASTKTSKITQSSVLICDGLPVGIPVASVSKLTLFLKRMVLIKNGAELSEQPNNVIVFV DETSQKTTGIGFIDFKDDEAAIKFKTRFVELKFDNKNTLKFYTKKEIDEILKENDEYTPL VFNPIEVTDFKGWLKEDKYTEGNECFATFQYGKTISLGWYNPSIPKEITMQEEQPFISSN CSFSPSGTFLYSITEHGLIVVQPDCKKKFQFPHSGLTHVTISPHDTFIATYSATAPYNRH IIVWDRRFTKGIKFFDLKANSLKRMTETLKKDKTLTPIGQDFVQFSYNEKYLARISEVDS NSIEIYTTPTIQLLSNKLVTFESSIDKISWSPKSNIIVAYHEPLQKTNEQAHFYFYDVDK QEIIFKHKVFSLKGAEFGWHSSGKKLVVQCNKNKKTAVLVFTLDKTITASMNELNATPHF MSVNPIKMQFGIMAYQHSKKGDSLFPTLHIYDISSNETKLISSLPNIEAKSFIYSPNGQF MVVSGINTSEPYLYFYNTDRMKLYKKVPIENMSYICWDPMGLFLGAVRSYVYSPHAKNGF MLYDCFGNLQFETYKTNFAGLLWRPQPTNIIKPEMAKEVESKFNECLKTMKEEDERKKEQ IELEKKQRADELMKRFRNIVQKNVQLSAKEHLRAYDSGMKIIVEEIKQKAESNEEVKENI TETQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_313840.fa Sequence name : EDI_313840 Sequence length : 664 VALUES OF COMPUTED PARAMETERS Coef20 : 4.358 CoefTot : -0.274 ChDiff : 6 ZoneTo : 47 KR : 6 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.271 1.682 0.295 0.603 MesoH : -0.239 0.420 -0.355 0.216 MuHd_075 : 21.961 15.235 5.482 5.673 MuHd_095 : 22.128 14.249 6.290 5.407 MuHd_100 : 24.477 16.323 8.451 5.331 MuHd_105 : 32.180 18.661 10.353 6.334 Hmax_075 : 18.317 18.783 2.927 5.787 Hmax_095 : 16.450 17.500 4.772 5.670 Hmax_100 : 16.200 18.600 5.383 5.570 Hmax_105 : 12.775 22.800 4.086 5.408 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5642 0.4358 DFMC : 0.5549 0.4451
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 664 EDI_313840 MSASTKTSKITQSSVLICDGLPVGIPVASVSKLTLFLKRMVLIKNGAELSEQPNNVIVFVDETSQKTTGIGFIDFKDDEA 80 AIKFKTRFVELKFDNKNTLKFYTKKEIDEILKENDEYTPLVFNPIEVTDFKGWLKEDKYTEGNECFATFQYGKTISLGWY 160 NPSIPKEITMQEEQPFISSNCSFSPSGTFLYSITEHGLIVVQPDCKKKFQFPHSGLTHVTISPHDTFIATYSATAPYNRH 240 IIVWDRRFTKGIKFFDLKANSLKRMTETLKKDKTLTPIGQDFVQFSYNEKYLARISEVDSNSIEIYTTPTIQLLSNKLVT 320 FESSIDKISWSPKSNIIVAYHEPLQKTNEQAHFYFYDVDKQEIIFKHKVFSLKGAEFGWHSSGKKLVVQCNKNKKTAVLV 400 FTLDKTITASMNELNATPHFMSVNPIKMQFGIMAYQHSKKGDSLFPTLHIYDISSNETKLISSLPNIEAKSFIYSPNGQF 480 MVVSGINTSEPYLYFYNTDRMKLYKKVPIENMSYICWDPMGLFLGAVRSYVYSPHAKNGFMLYDCFGNLQFETYKTNFAG 560 LLWRPQPTNIIKPEMAKEVESKFNECLKTMKEEDERKKEQIELEKKQRADELMKRFRNIVQKNVQLSAKEHLRAYDSGMK 640 IIVEEIKQKAESNEEVKENITETQ 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_313840 6 -MSASTK|TS 0.069 . EDI_313840 9 ASTKTSK|IT 0.064 . EDI_313840 32 PVASVSK|LT 0.057 . EDI_313840 38 KLTLFLK|RM 0.056 . EDI_313840 39 LTLFLKR|MV 0.222 . EDI_313840 44 KRMVLIK|NG 0.063 . EDI_313840 66 VDETSQK|TT 0.079 . EDI_313840 76 IGFIDFK|DD 0.077 . EDI_313840 83 DDEAAIK|FK 0.061 . EDI_313840 85 EAAIKFK|TR 0.069 . EDI_313840 87 AIKFKTR|FV 0.207 . EDI_313840 92 TRFVELK|FD 0.078 . EDI_313840 96 ELKFDNK|NT 0.055 . EDI_313840 100 DNKNTLK|FY 0.075 . EDI_313840 104 TLKFYTK|KE 0.065 . EDI_313840 105 LKFYTKK|EI 0.144 . EDI_313840 112 EIDEILK|EN 0.057 . EDI_313840 131 IEVTDFK|GW 0.064 . EDI_313840 135 DFKGWLK|ED 0.056 . EDI_313840 138 GWLKEDK|YT 0.081 . EDI_313840 153 ATFQYGK|TI 0.065 . EDI_313840 166 YNPSIPK|EI 0.071 . EDI_313840 206 VVQPDCK|KK 0.061 . EDI_313840 207 VQPDCKK|KF 0.068 . EDI_313840 208 QPDCKKK|FQ 0.118 . EDI_313840 239 ATAPYNR|HI 0.093 . EDI_313840 246 HIIVWDR|RF 0.097 . EDI_313840 247 IIVWDRR|FT 0.153 . EDI_313840 250 WDRRFTK|GI 0.137 . EDI_313840 253 RFTKGIK|FF 0.060 . EDI_313840 258 IKFFDLK|AN 0.073 . EDI_313840 263 LKANSLK|RM 0.063 . EDI_313840 264 KANSLKR|MT 0.244 . EDI_313840 270 RMTETLK|KD 0.056 . EDI_313840 271 MTETLKK|DK 0.089 . EDI_313840 273 ETLKKDK|TL 0.069 . EDI_313840 290 QFSYNEK|YL 0.067 . EDI_313840 294 NEKYLAR|IS 0.087 . EDI_313840 317 IQLLSNK|LV 0.062 . EDI_313840 327 FESSIDK|IS 0.058 . EDI_313840 333 KISWSPK|SN 0.128 . EDI_313840 346 YHEPLQK|TN 0.067 . EDI_313840 360 YFYDVDK|QE 0.061 . EDI_313840 366 KQEIIFK|HK 0.065 . EDI_313840 368 EIIFKHK|VF 0.067 . EDI_313840 373 HKVFSLK|GA 0.101 . EDI_313840 384 GWHSSGK|KL 0.072 . EDI_313840 385 WHSSGKK|LV 0.129 . EDI_313840 392 LVVQCNK|NK 0.061 . EDI_313840 394 VQCNKNK|KT 0.068 . EDI_313840 395 QCNKNKK|TA 0.108 . EDI_313840 405 LVFTLDK|TI 0.064 . EDI_313840 427 MSVNPIK|MQ 0.081 . EDI_313840 439 MAYQHSK|KG 0.067 . EDI_313840 440 AYQHSKK|GD 0.109 . EDI_313840 459 ISSNETK|LI 0.080 . EDI_313840 470 LPNIEAK|SF 0.118 . EDI_313840 500 YFYNTDR|MK 0.069 . EDI_313840 502 YNTDRMK|LY 0.060 . EDI_313840 505 DRMKLYK|KV 0.090 . EDI_313840 506 RMKLYKK|VP 0.078 . EDI_313840 528 LFLGAVR|SY 0.091 . EDI_313840 537 VYSPHAK|NG 0.070 . EDI_313840 555 LQFETYK|TN 0.071 . EDI_313840 564 FAGLLWR|PQ 0.074 . EDI_313840 572 QPTNIIK|PE 0.069 . EDI_313840 577 IKPEMAK|EV 0.084 . EDI_313840 582 AKEVESK|FN 0.080 . EDI_313840 588 KFNECLK|TM 0.059 . EDI_313840 591 ECLKTMK|EE 0.057 . EDI_313840 596 MKEEDER|KK 0.100 . EDI_313840 597 KEEDERK|KE 0.073 . EDI_313840 598 EEDERKK|EQ 0.083 . EDI_313840 605 EQIELEK|KQ 0.062 . EDI_313840 606 QIELEKK|QR 0.086 . EDI_313840 608 ELEKKQR|AD 0.088 . EDI_313840 614 RADELMK|RF 0.057 . EDI_313840 615 ADELMKR|FR 0.168 . EDI_313840 617 ELMKRFR|NI 0.117 . EDI_313840 622 FRNIVQK|NV 0.088 . EDI_313840 629 NVQLSAK|EH 0.064 . EDI_313840 633 SAKEHLR|AY 0.117 . EDI_313840 640 AYDSGMK|II 0.057 . EDI_313840 647 IIVEEIK|QK 0.062 . EDI_313840 649 VEEIKQK|AE 0.070 . EDI_313840 657 ESNEEVK|EN 0.068 . ____________________________^_________________

  • Fasta :-

    >EDI_313840 ATGAGTGCTTCAACTAAAACGTCTAAAATTACACAATCTTCTGTACTTATCTGTGATGGA CTTCCAGTAGGAATTCCTGTTGCTTCAGTTTCTAAATTAACATTATTCTTAAAAAGAATG GTATTGATAAAGAATGGAGCAGAATTATCTGAACAACCAAATAATGTAATAGTTTTTGTT GATGAAACAAGCCAAAAAACTACAGGGATTGGGTTTATTGATTTTAAAGATGATGAAGCA GCAATAAAATTTAAAACAAGATTTGTTGAATTAAAATTTGATAATAAAAATACGTTAAAA TTTTATACTAAAAAAGAAATTGATGAAATTTTAAAAGAAAATGATGAATATACACCATTA GTCTTTAATCCAATTGAAGTTACTGATTTTAAAGGATGGCTTAAAGAAGATAAATATACT GAAGGAAATGAATGTTTTGCAACATTTCAATATGGAAAAACTATTTCATTAGGATGGTAT AACCCAAGTATTCCAAAAGAAATAACAATGCAAGAAGAACAACCATTTATATCATCTAAT TGTTCATTTTCACCATCAGGTACATTTTTATATTCAATCACTGAACATGGATTAATTGTA GTTCAACCAGATTGTAAAAAGAAGTTCCAATTTCCACATTCAGGATTAACACATGTTACT ATTTCACCACATGATACATTTATTGCTACATATTCAGCTACAGCACCTTATAATAGACAT ATTATTGTTTGGGATAGAAGATTTACAAAAGGTATTAAATTCTTTGATTTAAAAGCAAAT AGTTTAAAAAGAATGACAGAAACATTAAAAAAAGATAAAACTTTAACACCAATTGGACAA GATTTTGTTCAATTTAGTTATAATGAAAAATATTTAGCTAGAATTAGTGAAGTTGATTCT AATTCAATTGAAATATATACTACACCAACAATTCAATTATTAAGTAATAAATTAGTTACA TTTGAAAGTTCAATTGATAAAATTAGTTGGAGTCCTAAATCAAATATTATTGTTGCTTAT CATGAACCACTTCAAAAAACTAATGAACAAGCACATTTCTACTTTTATGATGTTGATAAA CAAGAAATTATTTTTAAACATAAAGTATTTTCATTAAAAGGAGCAGAATTTGGATGGCAT TCATCAGGAAAGAAATTAGTTGTTCAATGCAATAAAAATAAGAAAACAGCTGTTTTAGTA TTTACATTAGATAAAACAATTACTGCATCTATGAATGAATTAAATGCTACACCTCATTTT ATGAGTGTTAATCCAATAAAAATGCAATTTGGTATTATGGCATATCAACATAGTAAAAAA GGAGATTCATTATTCCCAACATTACATATTTATGATATTAGTAGTAATGAAACTAAATTA ATTTCATCACTTCCTAATATCGAAGCTAAATCATTTATTTATTCACCAAATGGACAATTT ATGGTAGTAAGTGGAATTAATACATCAGAACCATATTTATATTTCTATAATACTGATAGA ATGAAATTATATAAAAAAGTTCCAATTGAAAATATGAGTTATATTTGTTGGGATCCAATG GGATTATTCCTTGGTGCAGTTCGTTCATATGTTTATTCTCCACATGCAAAGAATGGATTT ATGTTATATGATTGTTTTGGAAATTTACAATTTGAAACATACAAAACTAATTTTGCTGGA TTATTATGGAGACCACAACCAACAAATATTATTAAACCTGAAATGGCTAAAGAAGTTGAA AGTAAATTTAATGAATGTTTAAAGACAATGAAAGAAGAAGATGAACGAAAGAAAGAACAA ATTGAATTAGAAAAGAAACAAAGAGCTGATGAATTAATGAAAAGGTTCAGAAATATTGTT CAAAAGAATGTTCAATTATCTGCTAAAGAACATTTAAGAGCTTATGATTCTGGAATGAAA ATTATTGTTGAAGAAATTAAACAAAAGGCAGAATCTAATGAAGAAGTAAAAGAAAATATA ACAGAAACTCAGTAA
  • Download Fasta

  • Fasta :-

    MSASTKTSKITQSSVLICDGLPVGIPVASVSKLTLFLKRMVLIKNGAELSEQPNNVIVFV DETSQKTTGIGFIDFKDDEAAIKFKTRFVELKFDNKNTLKFYTKKEIDEILKENDEYTPL VFNPIEVTDFKGWLKEDKYTEGNECFATFQYGKTISLGWYNPSIPKEITMQEEQPFISSN CSFSPSGTFLYSITEHGLIVVQPDCKKKFQFPHSGLTHVTISPHDTFIATYSATAPYNRH IIVWDRRFTKGIKFFDLKANSLKRMTETLKKDKTLTPIGQDFVQFSYNEKYLARISEVDS NSIEIYTTPTIQLLSNKLVTFESSIDKISWSPKSNIIVAYHEPLQKTNEQAHFYFYDVDK QEIIFKHKVFSLKGAEFGWHSSGKKLVVQCNKNKKTAVLVFTLDKTITASMNELNATPHF MSVNPIKMQFGIMAYQHSKKGDSLFPTLHIYDISSNETKLISSLPNIEAKSFIYSPNGQF MVVSGINTSEPYLYFYNTDRMKLYKKVPIENMSYICWDPMGLFLGAVRSYVYSPHAKNGF MLYDCFGNLQFETYKTNFAGLLWRPQPTNIIKPEMAKEVESKFNECLKTMKEEDERKKEQ IELEKKQRADELMKRFRNIVQKNVQLSAKEHLRAYDSGMKIIVEEIKQKAESNEEVKENI TETQ

  • title: WD40 repeat
  • coordinates: S178-F211
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_313840331 SKISWSPKSN0.992unspEDI_313840331 SKISWSPKSN0.992unspEDI_313840331 SKISWSPKSN0.992unspEDI_313840371 SHKVFSLKGA0.994unspEDI_313840627 SNVQLSAKEH0.997unspEDI_313840652 SQKAESNEEV0.997unspEDI_313840184 SNCSFSPSGT0.994unspEDI_313840222 SHVTISPHDT0.998unsp

EDI_313840      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India