EDI_316920 | 26S protease regulatory subunit 6A, putative

_IDPredictionOTHERSPmTPCS_Position
EDI_316920OTHER0.9999770.0000130.000010
No Results

  • Fasta :-

    >EDI_316920 MEGFTEEEIIILNEADILSLSNEEIKQEIKQMERQEGVIRHEHERIRQELSVINKQNKES KEKIEMFAKLPFLISNVVEILDMPEEENDDGSGLDNKGNIGKKGVVINTSMRSNVFLPVS GLVDVKELKPGDLVGVNKDTYLILEKLPQQYDGRVKSMEVIERPTETYNDIGGLDKEMKE MIEAIVLPMTQKEKFEKIGIQTPKGVLLYGPPGTGKTLMARACAAQTKSTFLKLAASQLV SSSIGDGSRIIRDMFALAKSKAPAIIFIDEIDAIGTKRTESEHSGDREIQRTMLELLNQL DGFSKTDDVRVIAATNRIDVLDPALLRSGRFDRKIEFPTPNEEARIHILQIHSKKLKCSD DINFEELARSTQDFNGAQLKAVCVEAGMIALRREALEIKHEDFQQGILEVQSKKKKSLTY FA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_316920.fa Sequence name : EDI_316920 Sequence length : 422 VALUES OF COMPUTED PARAMETERS Coef20 : 3.440 CoefTot : 0.000 ChDiff : -11 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.782 1.294 -0.047 0.496 MesoH : -0.386 0.409 -0.292 0.190 MuHd_075 : 21.617 8.516 5.379 2.207 MuHd_095 : 12.380 5.002 3.103 1.473 MuHd_100 : 18.985 11.119 4.471 3.232 MuHd_105 : 20.058 13.265 4.321 3.756 Hmax_075 : 6.650 13.300 0.545 5.028 Hmax_095 : -2.800 7.800 -1.892 3.520 Hmax_100 : 9.200 15.100 0.605 5.320 Hmax_105 : -0.300 13.100 -0.921 5.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9976 0.0024 DFMC : 0.9916 0.0084
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 422 EDI_316920 MEGFTEEEIIILNEADILSLSNEEIKQEIKQMERQEGVIRHEHERIRQELSVINKQNKESKEKIEMFAKLPFLISNVVEI 80 LDMPEEENDDGSGLDNKGNIGKKGVVINTSMRSNVFLPVSGLVDVKELKPGDLVGVNKDTYLILEKLPQQYDGRVKSMEV 160 IERPTETYNDIGGLDKEMKEMIEAIVLPMTQKEKFEKIGIQTPKGVLLYGPPGTGKTLMARACAAQTKSTFLKLAASQLV 240 SSSIGDGSRIIRDMFALAKSKAPAIIFIDEIDAIGTKRTESEHSGDREIQRTMLELLNQLDGFSKTDDVRVIAATNRIDV 320 LDPALLRSGRFDRKIEFPTPNEEARIHILQIHSKKLKCSDDINFEELARSTQDFNGAQLKAVCVEAGMIALRREALEIKH 400 EDFQQGILEVQSKKKKSLTYFA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_316920 26 LSNEEIK|QE 0.069 . EDI_316920 30 EIKQEIK|QM 0.067 . EDI_316920 34 EIKQMER|QE 0.091 . EDI_316920 40 RQEGVIR|HE 0.092 . EDI_316920 45 IRHEHER|IR 0.084 . EDI_316920 47 HEHERIR|QE 0.085 . EDI_316920 55 ELSVINK|QN 0.066 . EDI_316920 58 VINKQNK|ES 0.074 . EDI_316920 61 KQNKESK|EK 0.071 . EDI_316920 63 NKESKEK|IE 0.060 . EDI_316920 69 KIEMFAK|LP 0.059 . EDI_316920 97 GSGLDNK|GN 0.067 . EDI_316920 102 NKGNIGK|KG 0.063 . EDI_316920 103 KGNIGKK|GV 0.154 . EDI_316920 112 VINTSMR|SN 0.107 . EDI_316920 126 SGLVDVK|EL 0.062 . EDI_316920 129 VDVKELK|PG 0.061 . EDI_316920 138 DLVGVNK|DT 0.076 . EDI_316920 146 TYLILEK|LP 0.055 . EDI_316920 154 PQQYDGR|VK 0.083 . EDI_316920 156 QYDGRVK|SM 0.084 . EDI_316920 163 SMEVIER|PT 0.111 . EDI_316920 176 DIGGLDK|EM 0.058 . EDI_316920 179 GLDKEMK|EM 0.065 . EDI_316920 192 VLPMTQK|EK 0.061 . EDI_316920 194 PMTQKEK|FE 0.069 . EDI_316920 197 QKEKFEK|IG 0.069 . EDI_316920 204 IGIQTPK|GV 0.085 . EDI_316920 216 GPPGTGK|TL 0.061 . EDI_316920 221 GKTLMAR|AC 0.103 . EDI_316920 228 ACAAQTK|ST 0.100 . EDI_316920 233 TKSTFLK|LA 0.097 . EDI_316920 249 SIGDGSR|II 0.098 . EDI_316920 252 DGSRIIR|DM 0.336 . EDI_316920 259 DMFALAK|SK 0.076 . EDI_316920 261 FALAKSK|AP 0.061 . EDI_316920 277 IDAIGTK|RT 0.062 . EDI_316920 278 DAIGTKR|TE 0.131 . EDI_316920 287 SEHSGDR|EI 0.080 . EDI_316920 291 GDREIQR|TM 0.097 . EDI_316920 305 QLDGFSK|TD 0.058 . EDI_316920 310 SKTDDVR|VI 0.078 . EDI_316920 317 VIAATNR|ID 0.068 . EDI_316920 327 LDPALLR|SG 0.083 . EDI_316920 330 ALLRSGR|FD 0.330 . EDI_316920 333 RSGRFDR|KI 0.340 . EDI_316920 334 SGRFDRK|IE 0.080 . EDI_316920 345 TPNEEAR|IH 0.141 . EDI_316920 354 ILQIHSK|KL 0.066 . EDI_316920 355 LQIHSKK|LK 0.088 . EDI_316920 357 IHSKKLK|CS 0.098 . EDI_316920 369 NFEELAR|ST 0.110 . EDI_316920 380 FNGAQLK|AV 0.091 . EDI_316920 392 AGMIALR|RE 0.076 . EDI_316920 393 GMIALRR|EA 0.154 . EDI_316920 399 REALEIK|HE 0.067 . EDI_316920 413 ILEVQSK|KK 0.058 . EDI_316920 414 LEVQSKK|KK 0.085 . EDI_316920 415 EVQSKKK|KS 0.098 . EDI_316920 416 VQSKKKK|SL 0.201 . ____________________________^_________________

  • Fasta :-

    >EDI_316920 ATGGAAGGATTCACTGAAGAAGAAATAATTATATTAAATGAAGCAGATATTCTTTCACTT AGTAATGAAGAAATTAAACAAGAAATTAAACAAATGGAAAGACAAGAAGGAGTTATTAGA CATGAACATGAAAGAATTAGACAAGAACTTTCAGTTATTAATAAACAAAATAAAGAAAGT AAAGAAAAAATAGAAATGTTTGCAAAATTACCATTTTTAATATCAAATGTAGTTGAGATA TTAGATATGCCAGAAGAAGAAAATGATGATGGATCAGGATTAGATAATAAAGGAAATATA GGAAAAAAAGGAGTTGTTATTAATACATCTATGAGATCAAATGTATTTCTTCCAGTATCA GGACTTGTTGATGTTAAAGAACTTAAACCAGGAGATCTTGTTGGAGTTAATAAAGATACA TATTTAATATTAGAAAAATTACCACAACAATATGATGGAAGAGTTAAATCTATGGAAGTA ATTGAAAGACCAACAGAAACATATAATGATATAGGAGGATTAGATAAAGAAATGAAAGAA ATGATTGAAGCTATTGTTTTACCTATGACACAAAAAGAAAAATTTGAAAAAATTGGGATT CAAACACCAAAAGGAGTTCTTTTATATGGACCACCAGGAACAGGAAAAACATTAATGGCA AGAGCATGTGCAGCACAAACTAAAAGTACATTTTTAAAATTAGCAGCTTCACAACTTGTT TCATCAAGTATTGGAGATGGATCAAGAATTATTAGAGATATGTTTGCACTTGCTAAATCA AAAGCACCAGCAATTATTTTTATTGATGAAATAGATGCAATTGGTACAAAAAGAACAGAA AGTGAACATAGTGGAGATAGAGAAATTCAAAGAACAATGTTAGAATTATTAAATCAATTA GATGGATTTAGTAAAACAGATGATGTTAGAGTTATTGCAGCAACAAATAGAATTGATGTT TTAGATCCAGCATTATTAAGATCAGGAAGATTTGATAGAAAAATAGAATTCCCAACACCA AATGAAGAAGCAAGAATTCATATTTTACAAATTCATAGTAAAAAATTAAAATGTAGTGAT GATATTAATTTTGAAGAACTTGCACGTTCTACACAAGATTTTAATGGAGCACAATTAAAA GCAGTTTGTGTTGAAGCAGGAATGATTGCATTAAGAAGAGAAGCATTAGAAATTAAACAT GAAGATTTCCAACAAGGAATATTAGAAGTTCAAAGCAAGAAAAAGAAAAGTTTAACATAT TTTGCTTAA
  • Download Fasta

  • Fasta :-

    MEGFTEEEIIILNEADILSLSNEEIKQEIKQMERQEGVIRHEHERIRQELSVINKQNKES KEKIEMFAKLPFLISNVVEILDMPEEENDDGSGLDNKGNIGKKGVVINTSMRSNVFLPVS GLVDVKELKPGDLVGVNKDTYLILEKLPQQYDGRVKSMEVIERPTETYNDIGGLDKEMKE MIEAIVLPMTQKEKFEKIGIQTPKGVLLYGPPGTGKTLMARACAAQTKSTFLKLAASQLV SSSIGDGSRIIRDMFALAKSKAPAIIFIDEIDAIGTKRTESEHSGDREIQRTMLELLNQL DGFSKTDDVRVIAATNRIDVLDPALLRSGRFDRKIEFPTPNEEARIHILQIHSKKLKCSD DINFEELARSTQDFNGAQLKAVCVEAGMIALRREALEIKHEDFQQGILEVQSKKKKSLTY FA

  • title: ATP binding site
  • coordinates: P211,P212,G213,T214,G215,K216,T217,L218,D269,N316
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_31692092 SNDDGSGLDN0.992unspEDI_31692092 SNDDGSGLDN0.992unspEDI_31692092 SNDDGSGLDN0.992unspEDI_316920157 SGRVKSMEVI0.992unspEDI_316920202 TIGIQTPKGV0.995unspEDI_316920281 SKRTESEHSG0.997unspEDI_316920284 SESEHSGDRE0.994unspEDI_31692021 SILSLSNEEI0.992unspEDI_31692060 SQNKESKEKI0.993unsp

EDI_316920      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India