EDI_335240 | methionine aminopeptidase, putative

UniProt_ID: B0ET04

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0004177 GO:0008235
Computed_GO_Functions: aminopeptidase activity metalloexopeptidase activity
Computed_GO_Process_IDs: GO:0006508
Computed_GO_Processes: proteolysis
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	EDI_335240	OTHER	0.999968	0.000007	0.000025

No Results

Fasta :-
>EDI_335240 MQATGKPHSKTTKSKKSGSKANKKPTTSSVKPTTPTTPVDPSVIPPEIKEPTETLSTMYK DEKCFPEGENMQYTQEWNLQRFTSAEARERERALIDIEDYRKAAAIHKSVRQWAQQWIKP GMSDLFVAENIERKVREECEVDGVNTTERGMAFPCGLSVNSCAAHFTPNPNDPLSFYKTD DVVKIDFGVHVNGHLIDSAFTMTWDPTLQPILDCAKDATNTGIKNIGVDVRLCDIGDAIE EVMNSYEVEIKGKTYQLQPVRNLSGHMVGSYAVHAGKSIPICKGGPQTKMEEGEVYALET FATTGRGRVDDSGPASHYMVDANAFDYPVRDGNAKRLLRALDANFKTLAFCRRYVDKIGF AKWQMPFKFLVDDGCVNPYPPLSDCHGSYVAQFEHTIYLKPTCKEVLSRSFDY
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_335240.fa Sequence name : EDI_335240 Sequence length : 413 VALUES OF COMPUTED PARAMETERS Coef20 : 3.402 CoefTot : -2.356 ChDiff : -4 ZoneTo : 39 KR : 9 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.200 0.894 0.129 0.425 MesoH : -0.547 0.113 -0.407 0.195 MuHd_075 : 28.238 12.856 7.681 5.033 MuHd_095 : 36.783 14.101 11.397 6.869 MuHd_100 : 31.851 10.044 9.525 5.704 MuHd_105 : 37.286 13.853 10.912 7.083 Hmax_075 : -3.800 4.433 -3.116 -1.130 Hmax_095 : 4.550 -1.000 -0.832 1.310 Hmax_100 : 4.000 -3.300 -0.832 0.800 Hmax_105 : 5.600 -2.917 -0.402 0.945 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1569 0.8431 DFMC : 0.0547 0.9453 This protein is probably imported in chloroplast. f(Ser) = 0.1538 f(Arg) = 0.0000 CMi = 2.19780 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 413 EDI_335240 MQATGKPHSKTTKSKKSGSKANKKPTTSSVKPTTPTTPVDPSVIPPEIKEPTETLSTMYKDEKCFPEGENMQYTQEWNLQ 80 RFTSAEARERERALIDIEDYRKAAAIHKSVRQWAQQWIKPGMSDLFVAENIERKVREECEVDGVNTTERGMAFPCGLSVN 160 SCAAHFTPNPNDPLSFYKTDDVVKIDFGVHVNGHLIDSAFTMTWDPTLQPILDCAKDATNTGIKNIGVDVRLCDIGDAIE 240 EVMNSYEVEIKGKTYQLQPVRNLSGHMVGSYAVHAGKSIPICKGGPQTKMEEGEVYALETFATTGRGRVDDSGPASHYMV 320 DANAFDYPVRDGNAKRLLRALDANFKTLAFCRRYVDKIGFAKWQMPFKFLVDDGCVNPYPPLSDCHGSYVAQFEHTIYLK 400 PTCKEVLSRSFDY 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_335240 6 -MQATGK|PH 0.066 . EDI_335240 10 TGKPHSK|TT 0.070 . EDI_335240 13 PHSKTTK|SK 0.096 . EDI_335240 15 SKTTKSK|KS 0.077 . EDI_335240 16 KTTKSKK|SG 0.206 . EDI_335240 20 SKKSGSK|AN 0.065 . EDI_335240 23 SGSKANK|KP 0.067 . EDI_335240 24 GSKANKK|PT 0.104 . EDI_335240 31 PTTSSVK|PT 0.061 . EDI_335240 49 VIPPEIK|EP 0.061 . EDI_335240 60 TLSTMYK|DE 0.082 . EDI_335240 63 TMYKDEK|CF 0.075 . EDI_335240 81 QEWNLQR|FT 0.124 . EDI_335240 88 FTSAEAR|ER 0.113 . EDI_335240 90 SAEARER|ER 0.068 . EDI_335240 92 EARERER|AL 0.117 . EDI_335240 101 IDIEDYR|KA 0.102 . EDI_335240 102 DIEDYRK|AA 0.073 . EDI_335240 108 KAAAIHK|SV 0.133 . EDI_335240 111 AIHKSVR|QW 0.135 . EDI_335240 119 WAQQWIK|PG 0.062 . EDI_335240 133 VAENIER|KV 0.092 . EDI_335240 134 AENIERK|VR 0.084 . EDI_335240 136 NIERKVR|EE 0.207 . EDI_335240 149 GVNTTER|GM 0.078 . EDI_335240 178 DPLSFYK|TD 0.066 . EDI_335240 184 KTDDVVK|ID 0.061 . EDI_335240 216 PILDCAK|DA 0.069 . EDI_335240 224 ATNTGIK|NI 0.067 . EDI_335240 231 NIGVDVR|LC 0.096 . EDI_335240 251 SYEVEIK|GK 0.066 . EDI_335240 253 EVEIKGK|TY 0.060 . EDI_335240 261 YQLQPVR|NL 0.091 . EDI_335240 277 YAVHAGK|SI 0.081 . EDI_335240 283 KSIPICK|GG 0.065 . EDI_335240 289 KGGPQTK|ME 0.072 . EDI_335240 306 TFATTGR|GR 0.074 . EDI_335240 308 ATTGRGR|VD 0.085 . EDI_335240 330 AFDYPVR|DG 0.089 . EDI_335240 335 VRDGNAK|RL 0.067 . EDI_335240 336 RDGNAKR|LL 0.183 . EDI_335240 339 NAKRLLR|AL 0.332 . EDI_335240 346 ALDANFK|TL 0.056 . EDI_335240 352 KTLAFCR|RY 0.082 . EDI_335240 353 TLAFCRR|YV 0.494 . EDI_335240 357 CRRYVDK|IG 0.083 . EDI_335240 362 DKIGFAK|WQ 0.067 . EDI_335240 368 KWQMPFK|FL 0.072 . EDI_335240 400 EHTIYLK|PT 0.061 . EDI_335240 404 YLKPTCK|EV 0.061 . EDI_335240 409 CKEVLSR|SF 0.150 . ____________________________^_________________

Fasta :-
>EDI_335240 ATGCAAGCCACTGGAAAACCACACTCAAAAACTACTAAATCTAAAAAGTCAGGTTCAAAA GCTAATAAAAAACCAACAACTTCAAGTGTTAAACCAACTACACCAACTACACCAGTTGAC CCATCAGTAATTCCACCTGAAATTAAAGAACCAACTGAAACTTTATCTACTATGTATAAA GATGAAAAGTGCTTCCCAGAAGGAGAAAATATGCAATATACACAAGAATGGAATTTACAA AGATTCACAAGTGCTGAAGCCAGAGAACGTGAAAGAGCATTAATTGATATTGAAGATTAT AGAAAAGCTGCAGCAATTCATAAAAGTGTTAGACAATGGGCTCAACAATGGATTAAACCA GGAATGTCAGATCTTTTTGTTGCAGAAAATATTGAGAGAAAAGTTAGAGAAGAATGTGAA GTTGATGGAGTAAATACTACAGAACGAGGTATGGCTTTTCCTTGTGGCCTTTCTGTAAAT TCATGTGCAGCACATTTCACACCAAATCCAAACGATCCATTATCATTCTATAAAACTGAT GATGTTGTTAAAATTGACTTTGGGGTACATGTTAATGGACATTTAATTGATTCAGCTTTC ACTATGACTTGGGACCCTACTTTACAACCAATTCTTGATTGTGCTAAAGACGCTACTAAT ACAGGTATTAAAAATATTGGTGTTGATGTTAGATTATGTGATATAGGTGATGCTATTGAA GAAGTTATGAACAGTTATGAAGTTGAAATTAAAGGAAAAACTTATCAATTACAACCAGTA AGAAATCTTTCTGGACATATGGTTGGTTCATATGCAGTTCATGCTGGTAAGTCTATTCCA ATTTGTAAAGGTGGACCTCAAACTAAAATGGAAGAAGGTGAGGTTTATGCTCTTGAAACA TTTGCTACTACTGGAAGAGGGCGTGTTGATGATTCAGGACCTGCTTCTCATTATATGGTT GATGCTAATGCATTTGATTATCCAGTTAGAGATGGAAATGCAAAGAGATTACTTCGTGCA CTTGATGCTAATTTCAAGACATTAGCTTTTTGTAGAAGATATGTTGATAAAATTGGATTT GCTAAATGGCAAATGCCATTTAAATTCCTTGTTGATGATGGATGTGTTAATCCATATCCA CCATTATCAGATTGTCATGGAAGTTATGTTGCACAATTTGAACATACCATTTATCTTAAG CCAACTTGTAAAGAAGTTCTTTCAAGAAGTTTTGATTATTAA
Download Fasta

Fasta :-

MQATGKPHSKTTKSKKSGSKANKKPTTSSVKPTTPTTPVDPSVIPPEIKEPTETLSTMYK DEKCFPEGENMQYTQEWNLQRFTSAEARERERALIDIEDYRKAAAIHKSVRQWAQQWIKP GMSDLFVAENIERKVREECEVDGVNTTERGMAFPCGLSVNSCAAHFTPNPNDPLSFYKTD DVVKIDFGVHVNGHLIDSAFTMTWDPTLQPILDCAKDATNTGIKNIGVDVRLCDIGDAIE EVMNSYEVEIKGKTYQLQPVRNLSGHMVGSYAVHAGKSIPICKGGPQTKMEEGEVYALET FATTGRGRVDDSGPASHYMVDANAFDYPVRDGNAKRLLRALDANFKTLAFCRRYVDKIGF AKWQMPFKFLVDDGCVNPYPPLSDCHGSYVAQFEHTIYLKPTCKEVLSRSFDY

Creatinase/aminopeptidase

title: active site
coordinates: H165,D186,D197,H266,E299,E394

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	EDI_335240	T	33	0.712	0.650	EDI_335240	T	37	0.712	0.146	EDI_335240	T	26	0.707	0.117	EDI_335240	T	27	0.705	0.186	EDI_335240	T	36	0.705	0.697	EDI_335240	T	34	0.701	0.256	EDI_335240	S	42	0.651	0.500	EDI_335240	S	29	0.599	0.253	EDI_335240	T	4	0.592	0.431	EDI_335240	S	28	0.590	0.070	EDI_335240	T	52	0.541	0.074	EDI_335240	T	12	0.527	0.031	EDI_335240	S	19	0.525	0.028	EDI_335240	T	11	0.510	0.026

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	EDI_335240	T	33	0.712	0.650	EDI_335240	T	37	0.712	0.146	EDI_335240	T	26	0.707	0.117	EDI_335240	T	27	0.705	0.186	EDI_335240	T	36	0.705	0.697	EDI_335240	T	34	0.701	0.256	EDI_335240	S	42	0.651	0.500	EDI_335240	S	29	0.599	0.253	EDI_335240	T	4	0.592	0.431	EDI_335240	S	28	0.590	0.070	EDI_335240	T	52	0.541	0.074	EDI_335240	T	12	0.527	0.031	EDI_335240	S	19	0.525	0.028	EDI_335240	T	11	0.510	0.026

	ID	Site	Peptide	Score	Method
	EDI_335240	14 S	KTTKSKKSG	0.995	unsp

EDI_335240 | methionine aminopeptidase, putative

ID's

UniProt_ID: B0ET04

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0004177 GO:0008235

Computed_GO_Functions: aminopeptidase activity metalloexopeptidase activity

Computed_GO_Process_IDs: GO:0006508

Computed_GO_Processes: proteolysis

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Creatinase/aminopeptidase

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

EDI_335240

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India