EDI_342200 | O-sialoglycoprotein endopeptidase, putative

  • Computed_GO_Component_IDs:  GO:0000408      

  • Computed_GO_Components:  EKC/KEOPS complex      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0002949      

  • Computed_GO_Processes:  tRNA threonylcarbamoyladenosine modification      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EDI_342200OTHER0.9999060.0000530.000041
No Results

  • Fasta :-

    >EDI_342200 MTKEEIKYILGIEGSANKLGVGIVTSNGEVLSNLRDSYYAPSGQGFLPRQLAEHHRNNIL KLVKEALEKAKLTPQQISLIAYTKGPGIAAPLMVCAVVARTLSIIWNIPLIGVNHCVAHI EMGMLATGAKHPVCLYVSGSNTQVIAFSLGKYRIFGETIDIAVGNCLDRFAREVMLPNEP APGYNIEQMAKKGKKYIKLPYVVKGMDISLTGLLTSIETYINKHESVEDLCYSLQETLFA MLVEVTERAMSQCSASEVLVVGGVGCNVRLQNMLKTMAKERGATLGAMDERYCIDNGAMI AWTGYLMSKSGQFTSIEDATVHQRFRTDEVDVTWR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EDI_342200.fa Sequence name : EDI_342200 Sequence length : 335 VALUES OF COMPUTED PARAMETERS Coef20 : 3.148 CoefTot : -0.113 ChDiff : 1 ZoneTo : 3 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.235 1.953 0.292 0.604 MesoH : 0.654 1.000 -0.033 0.426 MuHd_075 : 37.725 20.217 10.875 6.192 MuHd_095 : 15.114 12.413 4.768 4.738 MuHd_100 : 23.774 17.504 7.642 5.741 MuHd_105 : 23.961 18.832 8.099 5.238 Hmax_075 : 3.150 6.417 -0.783 3.150 Hmax_095 : 0.800 4.400 -1.413 2.840 Hmax_100 : 3.500 7.600 -0.566 3.530 Hmax_105 : 4.550 12.950 0.764 4.702 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9708 0.0292 DFMC : 0.9688 0.0312
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 335 EDI_342200 MTKEEIKYILGIEGSANKLGVGIVTSNGEVLSNLRDSYYAPSGQGFLPRQLAEHHRNNILKLVKEALEKAKLTPQQISLI 80 AYTKGPGIAAPLMVCAVVARTLSIIWNIPLIGVNHCVAHIEMGMLATGAKHPVCLYVSGSNTQVIAFSLGKYRIFGETID 160 IAVGNCLDRFAREVMLPNEPAPGYNIEQMAKKGKKYIKLPYVVKGMDISLTGLLTSIETYINKHESVEDLCYSLQETLFA 240 MLVEVTERAMSQCSASEVLVVGGVGCNVRLQNMLKTMAKERGATLGAMDERYCIDNGAMIAWTGYLMSKSGQFTSIEDAT 320 VHQRFRTDEVDVTWR 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EDI_342200 3 ----MTK|EE 0.062 . EDI_342200 7 MTKEEIK|YI 0.075 . EDI_342200 18 IEGSANK|LG 0.055 . EDI_342200 35 EVLSNLR|DS 0.075 . EDI_342200 49 GQGFLPR|QL 0.113 . EDI_342200 56 QLAEHHR|NN 0.094 . EDI_342200 61 HRNNILK|LV 0.109 . EDI_342200 64 NILKLVK|EA 0.057 . EDI_342200 69 VKEALEK|AK 0.056 . EDI_342200 71 EALEKAK|LT 0.072 . EDI_342200 84 SLIAYTK|GP 0.074 . EDI_342200 100 VCAVVAR|TL 0.127 . EDI_342200 130 MLATGAK|HP 0.060 . EDI_342200 151 IAFSLGK|YR 0.064 . EDI_342200 153 FSLGKYR|IF 0.110 . EDI_342200 169 VGNCLDR|FA 0.108 . EDI_342200 172 CLDRFAR|EV 0.273 . EDI_342200 191 NIEQMAK|KG 0.058 . EDI_342200 192 IEQMAKK|GK 0.096 . EDI_342200 194 QMAKKGK|KY 0.073 . EDI_342200 195 MAKKGKK|YI 0.098 . EDI_342200 198 KGKKYIK|LP 0.068 . EDI_342200 204 KLPYVVK|GM 0.074 . EDI_342200 223 IETYINK|HE 0.061 . EDI_342200 248 LVEVTER|AM 0.090 . EDI_342200 269 GVGCNVR|LQ 0.075 . EDI_342200 275 RLQNMLK|TM 0.065 . EDI_342200 279 MLKTMAK|ER 0.079 . EDI_342200 281 KTMAKER|GA 0.136 . EDI_342200 291 LGAMDER|YC 0.119 . EDI_342200 309 TGYLMSK|SG 0.064 . EDI_342200 324 DATVHQR|FR 0.098 . EDI_342200 326 TVHQRFR|TD 0.098 . EDI_342200 335 EVDVTWR|-- 0.084 . ____________________________^_________________

  • Fasta :-

    >EDI_342200 ATGACAAAAGAAGAAATTAAATACATTCTTGGGATTGAAGGAAGTGCTAATAAACTTGGA GTAGGAATTGTTACCTCAAATGGAGAAGTACTAAGCAATTTAAGAGACAGTTATTACGCA CCTTCAGGACAAGGATTTCTTCCAAGACAATTAGCAGAACATCATCGAAATAATATTTTA AAACTAGTTAAAGAGGCATTAGAAAAAGCAAAATTAACACCACAACAAATTTCATTAATT GCTTATACTAAAGGACCAGGGATTGCTGCCCCTTTAATGGTATGTGCTGTTGTAGCACGA ACACTTTCAATTATATGGAATATTCCTTTAATAGGAGTTAATCATTGTGTTGCTCATATA GAAATGGGTATGTTAGCAACAGGAGCTAAACATCCAGTTTGTTTATATGTTTCAGGAAGT AATACACAAGTTATTGCATTTTCATTAGGTAAATATAGAATATTTGGAGAAACAATAGAT ATTGCTGTTGGGAATTGTTTAGATAGATTTGCAAGAGAAGTTATGTTACCAAATGAACCA GCCCCTGGTTATAATATTGAGCAAATGGCAAAAAAAGGAAAAAAATATATAAAATTACCT TACGTTGTAAAAGGAATGGACATTTCATTAACAGGACTATTAACTTCAATTGAAACATAT ATCAATAAACATGAAAGTGTTGAGGATCTTTGTTACTCTCTTCAAGAAACATTATTTGCT ATGTTAGTTGAAGTAACTGAAAGGGCAATGAGCCAATGTAGTGCTAGTGAAGTTCTTGTT GTAGGAGGAGTTGGATGTAATGTTAGATTACAAAATATGCTTAAAACAATGGCAAAAGAA AGAGGAGCAACATTAGGAGCAATGGACGAAAGATATTGTATTGATAATGGAGCGATGATT GCATGGACAGGGTATCTAATGTCTAAAAGTGGACAATTTACGTCTATAGAAGATGCAACA GTACATCAAAGATTTAGAACAGATGAAGTTGATGTTACATGGAGATAA
  • Download Fasta

  • Fasta :-

    MTKEEIKYILGIEGSANKLGVGIVTSNGEVLSNLRDSYYAPSGQGFLPRQLAEHHRNNIL KLVKEALEKAKLTPQQISLIAYTKGPGIAAPLMVCAVVARTLSIIWNIPLIGVNHCVAHI EMGMLATGAKHPVCLYVSGSNTQVIAFSLGKYRIFGETIDIAVGNCLDRFAREVMLPNEP APGYNIEQMAKKGKKYIKLPYVVKGMDISLTGLLTSIETYINKHESVEDLCYSLQETLFA MLVEVTERAMSQCSASEVLVVGGVGCNVRLQNMLKTMAKERGATLGAMDERYCIDNGAMI AWTGYLMSKSGQFTSIEDATVHQRFRTDEVDVTWR

  • title: nucleotide binding site
  • coordinates: E13,G14,S15,A16,K18,G20,H115,V137,S138,G139,S140
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EDI_342200251 SERAMSQCSA0.996unspEDI_342200251 SERAMSQCSA0.996unspEDI_342200251 SERAMSQCSA0.996unspEDI_34220037 SNLRDSYYAP0.996unspEDI_342200226 SNKHESVEDL0.998unsp

EDI_342200      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India