EHI_001080 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
EHI_001080OTHER0.9999230.0000400.000036
No Results

  • Fasta :-

    >EHI_001080 MQHPFLKNEEIINFEELKPECIVNDIEEGIKICKENIQKIKEIPINQSTFENTVRPFDNA IIPLKDIMYKLNILILCRSDIKEYSLLNEEIFSKEVSFKSSIYTDNELFKLIEYNYKQKE VLEFDQRQLIEKIYNDFIDGGILLNDSQKNKFIQLKEEVFKLSKKYLSNVINDTDNYSLL IEDKNKLDGIPSNILEHYFNEAQKRKLKGYLITLQASSYLPLLKYCKNEEIRKEIFIQYN SLCSKGEYDNTNIINKVLEKRQEIAKLLGYSNYSEYITKRRMVKSSKNAMNFIEDLHKKI LSFFKREVEEIIKYKKEQTGNSELNPWDINFYIEQIKEKQLKYNEEEIRQYFPEPIVFKV LFEVYKRLYGITFCYNKSIKGWHQDVKYYDIIDSNNKRLGGVYFDLYSRKGKKAGGFHDV LRTNYLNEQGILIKPLGVVVCNFLPPNNDTISYFSHSELKTLFHESGHLMHTILSKQRFA SLTGMNVEWDFVELPSQIMENWIYEKEVFHLFNEVGGIKEIPQDIYNKIIQTRIFMSAFY MMRQLKFSKIDLELHQHYIQSNLPLDDFISLITENYDYPFSSSSLSIIRHFSHLFNLTYC YASGYYSYKWAEILEADAFELFKENGIFNSLISTKFKTSILEMGGSKPASELFKEFRGRN PDPSALLKKLNLIDY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_001080.fa Sequence name : EHI_001080 Sequence length : 675 VALUES OF COMPUTED PARAMETERS Coef20 : 2.668 CoefTot : -0.772 ChDiff : -4 ZoneTo : 8 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.935 1.488 0.129 0.584 MesoH : -0.470 0.131 -0.412 0.220 MuHd_075 : 12.534 14.775 5.351 4.011 MuHd_095 : 12.577 6.632 4.141 2.695 MuHd_100 : 5.993 2.979 2.535 1.512 MuHd_105 : 10.311 6.378 2.449 1.526 Hmax_075 : -3.267 7.000 -3.182 3.337 Hmax_095 : -10.762 -0.700 -5.245 1.304 Hmax_100 : 0.100 5.100 -2.376 3.240 Hmax_105 : -4.800 3.600 -4.286 1.598 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9873 0.0127 DFMC : 0.9892 0.0108
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 675 EHI_001080 MQHPFLKNEEIINFEELKPECIVNDIEEGIKICKENIQKIKEIPINQSTFENTVRPFDNAIIPLKDIMYKLNILILCRSD 80 IKEYSLLNEEIFSKEVSFKSSIYTDNELFKLIEYNYKQKEVLEFDQRQLIEKIYNDFIDGGILLNDSQKNKFIQLKEEVF 160 KLSKKYLSNVINDTDNYSLLIEDKNKLDGIPSNILEHYFNEAQKRKLKGYLITLQASSYLPLLKYCKNEEIRKEIFIQYN 240 SLCSKGEYDNTNIINKVLEKRQEIAKLLGYSNYSEYITKRRMVKSSKNAMNFIEDLHKKILSFFKREVEEIIKYKKEQTG 320 NSELNPWDINFYIEQIKEKQLKYNEEEIRQYFPEPIVFKVLFEVYKRLYGITFCYNKSIKGWHQDVKYYDIIDSNNKRLG 400 GVYFDLYSRKGKKAGGFHDVLRTNYLNEQGILIKPLGVVVCNFLPPNNDTISYFSHSELKTLFHESGHLMHTILSKQRFA 480 SLTGMNVEWDFVELPSQIMENWIYEKEVFHLFNEVGGIKEIPQDIYNKIIQTRIFMSAFYMMRQLKFSKIDLELHQHYIQ 560 SNLPLDDFISLITENYDYPFSSSSLSIIRHFSHLFNLTYCYASGYYSYKWAEILEADAFELFKENGIFNSLISTKFKTSI 640 LEMGGSKPASELFKEFRGRNPDPSALLKKLNLIDY 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................................................................P.............. 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EHI_001080 7 MQHPFLK|NE 0.070 . EHI_001080 18 INFEELK|PE 0.065 . EHI_001080 31 DIEEGIK|IC 0.054 . EHI_001080 34 EGIKICK|EN 0.066 . EHI_001080 39 CKENIQK|IK 0.063 . EHI_001080 41 ENIQKIK|EI 0.077 . EHI_001080 55 TFENTVR|PF 0.095 . EHI_001080 65 NAIIPLK|DI 0.082 . EHI_001080 70 LKDIMYK|LN 0.064 . EHI_001080 78 NILILCR|SD 0.092 . EHI_001080 82 LCRSDIK|EY 0.059 . EHI_001080 94 NEEIFSK|EV 0.069 . EHI_001080 99 SKEVSFK|SS 0.092 . EHI_001080 110 TDNELFK|LI 0.079 . EHI_001080 117 LIEYNYK|QK 0.070 . EHI_001080 119 EYNYKQK|EV 0.070 . EHI_001080 127 VLEFDQR|QL 0.080 . EHI_001080 132 QRQLIEK|IY 0.073 . EHI_001080 149 LLNDSQK|NK 0.075 . EHI_001080 151 NDSQKNK|FI 0.092 . EHI_001080 156 NKFIQLK|EE 0.059 . EHI_001080 161 LKEEVFK|LS 0.070 . EHI_001080 164 EVFKLSK|KY 0.051 . EHI_001080 165 VFKLSKK|YL 0.137 . EHI_001080 184 SLLIEDK|NK 0.066 . EHI_001080 186 LIEDKNK|LD 0.062 . EHI_001080 204 YFNEAQK|RK 0.060 . EHI_001080 205 FNEAQKR|KL 0.245 . EHI_001080 206 NEAQKRK|LK 0.099 . EHI_001080 208 AQKRKLK|GY 0.137 . EHI_001080 224 SYLPLLK|YC 0.061 . EHI_001080 227 PLLKYCK|NE 0.055 . EHI_001080 232 CKNEEIR|KE 0.084 . EHI_001080 233 KNEEIRK|EI 0.091 . EHI_001080 245 YNSLCSK|GE 0.071 . EHI_001080 256 NTNIINK|VL 0.067 . EHI_001080 260 INKVLEK|RQ 0.061 . EHI_001080 261 NKVLEKR|QE 0.168 . EHI_001080 266 KRQEIAK|LL 0.083 . EHI_001080 279 YSEYITK|RR 0.055 . EHI_001080 280 SEYITKR|RM 0.146 . EHI_001080 281 EYITKRR|MV 0.211 . EHI_001080 284 TKRRMVK|SS 0.289 . EHI_001080 287 RMVKSSK|NA 0.070 . EHI_001080 298 FIEDLHK|KI 0.059 . EHI_001080 299 IEDLHKK|IL 0.104 . EHI_001080 305 KILSFFK|RE 0.055 . EHI_001080 306 ILSFFKR|EV 0.570 *ProP* EHI_001080 313 EVEEIIK|YK 0.057 . EHI_001080 315 EEIIKYK|KE 0.067 . EHI_001080 316 EIIKYKK|EQ 0.076 . EHI_001080 337 FYIEQIK|EK 0.057 . EHI_001080 339 IEQIKEK|QL 0.073 . EHI_001080 342 IKEKQLK|YN 0.094 . EHI_001080 349 YNEEEIR|QY 0.093 . EHI_001080 359 PEPIVFK|VL 0.063 . EHI_001080 366 VLFEVYK|RL 0.066 . EHI_001080 367 LFEVYKR|LY 0.143 . EHI_001080 377 ITFCYNK|SI 0.074 . EHI_001080 380 CYNKSIK|GW 0.082 . EHI_001080 387 GWHQDVK|YY 0.079 . EHI_001080 397 IIDSNNK|RL 0.062 . EHI_001080 398 IDSNNKR|LG 0.210 . EHI_001080 409 YFDLYSR|KG 0.067 . EHI_001080 410 FDLYSRK|GK 0.104 . EHI_001080 412 LYSRKGK|KA 0.317 . EHI_001080 413 YSRKGKK|AG 0.099 . EHI_001080 422 GFHDVLR|TN 0.097 . EHI_001080 434 EQGILIK|PL 0.075 . EHI_001080 460 FSHSELK|TL 0.066 . EHI_001080 476 MHTILSK|QR 0.073 . EHI_001080 478 TILSKQR|FA 0.127 . EHI_001080 506 ENWIYEK|EV 0.073 . EHI_001080 519 NEVGGIK|EI 0.058 . EHI_001080 528 PQDIYNK|II 0.067 . EHI_001080 533 NKIIQTR|IF 0.117 . EHI_001080 543 SAFYMMR|QL 0.083 . EHI_001080 546 YMMRQLK|FS 0.141 . EHI_001080 549 RQLKFSK|ID 0.056 . EHI_001080 589 SSLSIIR|HF 0.091 . EHI_001080 609 SGYYSYK|WA 0.092 . EHI_001080 623 DAFELFK|EN 0.063 . EHI_001080 635 NSLISTK|FK 0.080 . EHI_001080 637 LISTKFK|TS 0.079 . EHI_001080 647 LEMGGSK|PA 0.069 . EHI_001080 654 PASELFK|EF 0.070 . EHI_001080 657 ELFKEFR|GR 0.093 . EHI_001080 659 FKEFRGR|NP 0.091 . EHI_001080 668 DPSALLK|KL 0.067 . EHI_001080 669 PSALLKK|LN 0.080 . ____________________________^_________________

  • Fasta :-

    >EHI_001080 ATGCAACATCCATTTTTAAAGAATGAAGAAATAATTAATTTTGAAGAGTTAAAACCAGAG TGTATTGTCAACGACATTGAAGAAGGGATTAAGATATGTAAAGAAAATATTCAAAAAATA AAAGAAATTCCAATAAATCAAAGTACATTTGAAAATACAGTACGTCCATTTGATAATGCA ATAATTCCATTAAAAGATATAATGTATAAACTTAACATATTAATTTTATGTAGAAGTGAT ATTAAAGAATATTCACTTCTAAATGAAGAAATTTTCTCAAAAGAAGTTTCATTTAAGTCG AGTATTTATACTGATAATGAATTATTTAAATTAATAGAATATAATTATAAACAAAAAGAA GTATTAGAATTTGATCAGAGACAATTAATAGAAAAAATTTATAATGACTTTATTGATGGA GGAATTTTACTTAATGATAGTCAAAAAAATAAATTTATTCAATTAAAAGAAGAAGTATTT AAATTAAGTAAAAAATATTTAAGTAACGTAATAAATGATACAGATAATTACTCATTATTA ATAGAAGATAAAAACAAATTAGATGGTATTCCATCTAATATTTTAGAACATTATTTTAAT GAAGCTCAAAAAAGAAAGTTAAAAGGTTATTTAATTACTCTTCAAGCATCTTCTTATTTA CCTTTACTTAAATATTGTAAAAATGAAGAAATTAGAAAAGAAATATTTATACAATATAAT AGTCTTTGTAGTAAAGGTGAATATGATAATACTAATATTATTAATAAAGTATTAGAAAAA AGACAAGAAATTGCTAAATTACTTGGATATTCAAATTATTCAGAATATATTACTAAAAGA AGAATGGTTAAAAGTAGTAAAAATGCAATGAATTTTATTGAAGATTTACATAAGAAAATA TTATCATTCTTCAAAAGAGAAGTAGAAGAAATAATAAAATATAAAAAAGAACAAACAGGA AATAGTGAATTAAATCCATGGGATATTAATTTTTATATTGAACAAATAAAAGAAAAACAA TTAAAATATAATGAAGAAGAAATAAGACAATATTTTCCAGAACCAATTGTATTTAAAGTA TTATTTGAAGTATATAAAAGATTATATGGAATTACTTTTTGTTATAATAAATCAATAAAA GGATGGCATCAAGATGTTAAATATTATGATATTATTGATTCAAATAATAAACGATTAGGT GGAGTTTATTTTGATTTATATTCAAGAAAAGGAAAAAAAGCAGGTGGATTTCATGATGTT TTAAGAACAAATTATTTAAATGAACAAGGAATACTTATTAAACCATTAGGAGTAGTTGTA TGTAATTTTCTACCACCAAATAATGATACTATTTCATATTTTAGTCATAGTGAATTAAAA ACATTATTTCATGAAAGTGGTCATCTTATGCATACTATTCTTTCTAAACAAAGATTTGCT TCATTAACTGGAATGAATGTAGAATGGGATTTTGTTGAATTACCAAGTCAAATTATGGAA AATTGGATATATGAAAAAGAAGTTTTTCATTTATTTAATGAAGTTGGTGGAATAAAAGAA ATTCCTCAAGACATATATAATAAAATAATTCAAACACGAATATTTATGTCAGCATTTTAT ATGATGAGACAACTTAAATTTAGTAAAATTGATTTAGAATTACATCAACATTATATTCAA TCTAATCTTCCTTTAGATGATTTTATTTCTTTAATTACTGAAAATTATGATTATCCTTTT TCTTCTTCTTCTTTATCTATTATTCGTCATTTTAGTCATTTATTTAATTTAACTTATTGT TATGCAAGTGGTTATTATTCTTATAAATGGGCTGAAATTCTTGAGGCTGATGCCTTTGAA TTATTTAAAGAAAATGGTATTTTTAATAGTCTTATTTCAACTAAATTCAAAACTTCTATC CTTGAAATGGGTGGTTCTAAACCAGCAAGTGAATTATTTAAAGAGTTTAGAGGAAGAAAT CCTGACCCATCTGCTTTATTAAAGAAACTTAATTTAATTGATTATTAA
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  • Fasta :-

    MQHPFLKNEEIINFEELKPECIVNDIEEGIKICKENIQKIKEIPINQSTFENTVRPFDNA IIPLKDIMYKLNILILCRSDIKEYSLLNEEIFSKEVSFKSSIYTDNELFKLIEYNYKQKE VLEFDQRQLIEKIYNDFIDGGILLNDSQKNKFIQLKEEVFKLSKKYLSNVINDTDNYSLL IEDKNKLDGIPSNILEHYFNEAQKRKLKGYLITLQASSYLPLLKYCKNEEIRKEIFIQYN SLCSKGEYDNTNIINKVLEKRQEIAKLLGYSNYSEYITKRRMVKSSKNAMNFIEDLHKKI LSFFKREVEEIIKYKKEQTGNSELNPWDINFYIEQIKEKQLKYNEEEIRQYFPEPIVFKV LFEVYKRLYGITFCYNKSIKGWHQDVKYYDIIDSNNKRLGGVYFDLYSRKGKKAGGFHDV LRTNYLNEQGILIKPLGVVVCNFLPPNNDTISYFSHSELKTLFHESGHLMHTILSKQRFA SLTGMNVEWDFVELPSQIMENWIYEKEVFHLFNEVGGIKEIPQDIYNKIIQTRIFMSAFY MMRQLKFSKIDLELHQHYIQSNLPLDDFISLITENYDYPFSSSSLSIIRHFSHLFNLTYC YASGYYSYKWAEILEADAFELFKENGIFNSLISTKFKTSILEMGGSKPASELFKEFRGRN PDPSALLKKLNLIDY

  • title: Zn binding site
  • coordinates: H464,H468,E493
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_001080586 SSSSLSIIRH0.992unspEHI_001080586 SSSSLSIIRH0.992unspEHI_001080586 SSSSLSIIRH0.992unspEHI_001080607 SSGYYSYKWA0.993unspEHI_001080455 SISYFSHSEL0.996unspEHI_001080548 SQLKFSKIDL0.997unsp

EHI_001080      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India