EHI_007750 | hypothetical protein

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  • Fasta :-

    >EHI_007750 MSNYNRPYEFKCVNEKICSTDPVYRYFMKSLLPSQKQPNGRYFDICMIRVNSLDNSHIDL CYNALPTQVIALYYTPTDSQLQKLTPPHKDYCGYYFFPYDIVEQQQSYFGGFNCIYYDID WDDSSYLKNMVDGFDYQYVNKSTGTQNFDEVHFVASAPFINQRY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_007750.fa Sequence name : EHI_007750 Sequence length : 164 VALUES OF COMPUTED PARAMETERS Coef20 : 3.682 CoefTot : -0.588 ChDiff : -5 ZoneTo : 8 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.606 0.824 -0.007 0.415 MesoH : -0.849 -0.169 -0.444 0.145 MuHd_075 : 25.686 14.324 9.878 5.706 MuHd_095 : 8.251 11.321 2.258 2.151 MuHd_100 : 5.735 6.355 1.323 1.193 MuHd_105 : 17.117 7.804 3.315 3.855 Hmax_075 : 4.025 7.600 2.544 2.820 Hmax_095 : -8.663 1.488 -2.554 0.586 Hmax_100 : -9.800 -0.800 -2.462 -0.050 Hmax_105 : -0.467 3.383 -2.617 2.637 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8798 0.1202 DFMC : 0.9239 0.0761
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 164 EHI_007750 MSNYNRPYEFKCVNEKICSTDPVYRYFMKSLLPSQKQPNGRYFDICMIRVNSLDNSHIDLCYNALPTQVIALYYTPTDSQ 80 LQKLTPPHKDYCGYYFFPYDIVEQQQSYFGGFNCIYYDIDWDDSSYLKNMVDGFDYQYVNKSTGTQNFDEVHFVASAPFI 160 NQRY 240 ................................................................................ 80 ................................................................................ 160 .... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_007750 6 -MSNYNR|PY 0.098 . EHI_007750 11 NRPYEFK|CV 0.094 . EHI_007750 16 FKCVNEK|IC 0.062 . EHI_007750 25 STDPVYR|YF 0.112 . EHI_007750 29 VYRYFMK|SL 0.099 . EHI_007750 36 SLLPSQK|QP 0.061 . EHI_007750 41 QKQPNGR|YF 0.123 . EHI_007750 49 FDICMIR|VN 0.076 . EHI_007750 83 TDSQLQK|LT 0.075 . EHI_007750 89 KLTPPHK|DY 0.070 . EHI_007750 128 DDSSYLK|NM 0.063 . EHI_007750 141 DYQYVNK|ST 0.118 . EHI_007750 163 APFINQR|Y- 0.106 . ____________________________^_________________

  • Fasta :-

    >EHI_007750 ATGTCAAATTATAATAGACCATATGAATTTAAATGTGTTAATGAAAAGATTTGTTCAACT GATCCAGTTTATAGATATTTCATGAAATCATTACTTCCATCTCAAAAACAACCAAATGGA AGATATTTTGATATTTGTATGATTCGAGTTAATTCTCTTGATAATTCACATATTGATTTA TGTTATAATGCTCTTCCAACTCAAGTTATTGCATTATATTATACTCCAACTGATTCACAA TTACAAAAATTAACACCACCACATAAAGATTATTGTGGATATTATTTCTTCCCTTATGAT ATCGTTGAACAACAACAATCCTATTTTGGTGGGTTTAATTGCATTTATTATGATATTGAT TGGGATGATTCTAGTTATCTTAAAAATATGGTTGATGGTTTTGATTATCAATACGTTAAT AAATCAACTGGAACACAGAATTTTGATGAAGTACATTTTGTTGCTTCAGCACCATTTATT AATCAACGCTATTAA
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  • Fasta :-

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EHI_007750      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India