EHI_009430 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_009430OTHER0.9982010.0002800.001520
No Results

  • Fasta :-

    >EHI_009430 MTRYIKRILSSCDEHSRSPHPIEGGTCGLYNLGNTCYLNSPLQCLAHCDIIQSFAYQFPT PFVKSLKPGDKTLYDNNTKIALAFFSVIKALWSNDYVVVTPKALKDLISDKYEQFRGHNQ QDAQEFTLVLLEELNMDLLRNNTNEIMVGTPTRIKLEKTPSEFADCIWNKYLQENNSIIT HTFSGQQQQKITCCECGYSSESFDPFNCISLTIPSIGRQRGFVPLIIVCKQGKPILCKVL VSVSVDINEIKNQIPKAIGNQEINICIDQLAFYVLQKNGKGKRRLINEGKLSLINYDKIV GYEIDSSKEIKVIIFIRVIKNENVVVLHNIPFLICIKQNCTIKELKRKIEKRMEWMKMEN NRICIVDEEGKQCKLCGERIGCTGCSLKEDMKLEELITKTKELYVSYDCEENDIIDEQII CESYKITNNQRLQTTAVSIFACLTLFTHGDSFETIDWFCDSCKKNVKAEVDVTIWRPPQV LIFQLKRFEFTEKYEQIKTYERVVFPPFKFDLKEYVSNTSFKEPILYDLFGIVNHQGKID KGHYYADCKVGTDWYRFDDEKVTKLEEVPTGSDDAYVLYYRLIE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_009430.fa Sequence name : EHI_009430 Sequence length : 584 VALUES OF COMPUTED PARAMETERS Coef20 : 4.103 CoefTot : 0.346 ChDiff : -4 ZoneTo : 12 KR : 3 DE : 0 CleavSite : 17 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.471 1.488 0.135 0.503 MesoH : -0.362 0.524 -0.240 0.221 MuHd_075 : 29.257 10.279 3.177 7.372 MuHd_095 : 43.578 27.086 12.509 9.889 MuHd_100 : 55.643 29.834 14.063 11.836 MuHd_105 : 55.724 27.995 13.226 11.570 Hmax_075 : -1.517 3.150 -1.717 2.123 Hmax_095 : 14.300 15.100 4.002 4.910 Hmax_100 : 16.200 15.700 4.305 4.600 Hmax_105 : 12.600 13.300 2.235 4.380 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2570 0.7430 DFMC : 0.2307 0.7693 This protein is probably imported in mitochondria. f(Ser) = 0.1667 f(Arg) = 0.1667 CMi = 0.54945 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 584 EHI_009430 MTRYIKRILSSCDEHSRSPHPIEGGTCGLYNLGNTCYLNSPLQCLAHCDIIQSFAYQFPTPFVKSLKPGDKTLYDNNTKI 80 ALAFFSVIKALWSNDYVVVTPKALKDLISDKYEQFRGHNQQDAQEFTLVLLEELNMDLLRNNTNEIMVGTPTRIKLEKTP 160 SEFADCIWNKYLQENNSIITHTFSGQQQQKITCCECGYSSESFDPFNCISLTIPSIGRQRGFVPLIIVCKQGKPILCKVL 240 VSVSVDINEIKNQIPKAIGNQEINICIDQLAFYVLQKNGKGKRRLINEGKLSLINYDKIVGYEIDSSKEIKVIIFIRVIK 320 NENVVVLHNIPFLICIKQNCTIKELKRKIEKRMEWMKMENNRICIVDEEGKQCKLCGERIGCTGCSLKEDMKLEELITKT 400 KELYVSYDCEENDIIDEQIICESYKITNNQRLQTTAVSIFACLTLFTHGDSFETIDWFCDSCKKNVKAEVDVTIWRPPQV 480 LIFQLKRFEFTEKYEQIKTYERVVFPPFKFDLKEYVSNTSFKEPILYDLFGIVNHQGKIDKGHYYADCKVGTDWYRFDDE 560 KVTKLEEVPTGSDDAYVLYYRLIE 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_009430 3 ----MTR|YI 0.119 . EHI_009430 6 -MTRYIK|RI 0.086 . EHI_009430 7 MTRYIKR|IL 0.209 . EHI_009430 17 SCDEHSR|SP 0.151 . EHI_009430 64 FPTPFVK|SL 0.096 . EHI_009430 67 PFVKSLK|PG 0.062 . EHI_009430 71 SLKPGDK|TL 0.064 . EHI_009430 79 LYDNNTK|IA 0.059 . EHI_009430 89 AFFSVIK|AL 0.061 . EHI_009430 102 YVVVTPK|AL 0.067 . EHI_009430 105 VTPKALK|DL 0.059 . EHI_009430 111 KDLISDK|YE 0.062 . EHI_009430 116 DKYEQFR|GH 0.120 . EHI_009430 140 LNMDLLR|NN 0.088 . EHI_009430 153 MVGTPTR|IK 0.093 . EHI_009430 155 GTPTRIK|LE 0.050 . EHI_009430 158 TRIKLEK|TP 0.079 . EHI_009430 170 ADCIWNK|YL 0.070 . EHI_009430 190 SGQQQQK|IT 0.070 . EHI_009430 218 TIPSIGR|QR 0.082 . EHI_009430 220 PSIGRQR|GF 0.083 . EHI_009430 230 PLIIVCK|QG 0.069 . EHI_009430 233 IVCKQGK|PI 0.064 . EHI_009430 238 GKPILCK|VL 0.060 . EHI_009430 251 VDINEIK|NQ 0.060 . EHI_009430 256 IKNQIPK|AI 0.105 . EHI_009430 277 AFYVLQK|NG 0.059 . EHI_009430 280 VLQKNGK|GK 0.069 . EHI_009430 282 QKNGKGK|RR 0.072 . EHI_009430 283 KNGKGKR|RL 0.185 . EHI_009430 284 NGKGKRR|LI 0.176 . EHI_009430 290 RLINEGK|LS 0.062 . EHI_009430 298 SLINYDK|IV 0.095 . EHI_009430 308 YEIDSSK|EI 0.066 . EHI_009430 311 DSSKEIK|VI 0.076 . EHI_009430 317 KVIIFIR|VI 0.086 . EHI_009430 320 IFIRVIK|NE 0.105 . EHI_009430 337 PFLICIK|QN 0.058 . EHI_009430 343 KQNCTIK|EL 0.066 . EHI_009430 346 CTIKELK|RK 0.059 . EHI_009430 347 TIKELKR|KI 0.224 . EHI_009430 348 IKELKRK|IE 0.097 . EHI_009430 351 LKRKIEK|RM 0.064 . EHI_009430 352 KRKIEKR|ME 0.249 . EHI_009430 357 KRMEWMK|ME 0.068 . EHI_009430 362 MKMENNR|IC 0.110 . EHI_009430 371 IVDEEGK|QC 0.055 . EHI_009430 374 EEGKQCK|LC 0.070 . EHI_009430 379 CKLCGER|IG 0.069 . EHI_009430 388 CTGCSLK|ED 0.062 . EHI_009430 392 SLKEDMK|LE 0.062 . EHI_009430 399 LEELITK|TK 0.057 . EHI_009430 401 ELITKTK|EL 0.066 . EHI_009430 425 IICESYK|IT 0.074 . EHI_009430 431 KITNNQR|LQ 0.079 . EHI_009430 463 WFCDSCK|KN 0.068 . EHI_009430 464 FCDSCKK|NV 0.104 . EHI_009430 467 SCKKNVK|AE 0.066 . EHI_009430 476 VDVTIWR|PP 0.076 . EHI_009430 486 VLIFQLK|RF 0.067 . EHI_009430 487 LIFQLKR|FE 0.148 . EHI_009430 493 RFEFTEK|YE 0.061 . EHI_009430 498 EKYEQIK|TY 0.070 . EHI_009430 502 QIKTYER|VV 0.083 . EHI_009430 509 VVFPPFK|FD 0.062 . EHI_009430 513 PFKFDLK|EY 0.053 . EHI_009430 522 VSNTSFK|EP 0.064 . EHI_009430 538 IVNHQGK|ID 0.064 . EHI_009430 541 HQGKIDK|GH 0.065 . EHI_009430 549 HYYADCK|VG 0.055 . EHI_009430 556 VGTDWYR|FD 0.091 . EHI_009430 561 YRFDDEK|VT 0.060 . EHI_009430 564 DDEKVTK|LE 0.061 . EHI_009430 581 AYVLYYR|LI 0.083 . ____________________________^_________________

  • Fasta :-

    >EHI_009430 ATGACAAGATATATTAAACGGATCTTAAGTTCTTGTGATGAGCATTCAAGATCACCACAT CCAATAGAAGGAGGAACATGTGGGTTATATAATTTAGGAAATACTTGTTATTTGAATAGT CCATTACAATGTTTAGCTCATTGTGATATTATACAGTCTTTTGCATATCAATTTCCAACA CCATTTGTAAAGAGTTTAAAACCGGGAGATAAAACCTTATATGACAATAATACAAAGATT GCTTTAGCCTTTTTTTCAGTTATAAAAGCATTATGGTCAAATGACTATGTTGTTGTAACC CCCAAAGCATTAAAAGATTTAATTAGTGACAAATACGAACAGTTTAGAGGACATAACCAA CAAGACGCACAAGAATTTACATTAGTATTGCTAGAAGAATTAAATATGGATTTATTGAGA AATAACACAAATGAAATAATGGTTGGAACACCAACACGTATTAAATTAGAAAAAACACCA TCTGAATTTGCTGATTGTATTTGGAATAAATATCTTCAAGAAAACAATTCAATTATTACT CATACATTTAGTGGACAACAACAACAAAAAATTACATGTTGTGAATGTGGATATTCAAGT GAATCATTTGATCCATTTAATTGTATTTCATTAACAATACCATCTATAGGAAGACAACGA GGGTTTGTACCATTAATTATCGTTTGTAAGCAAGGGAAACCTATTCTATGTAAAGTACTT GTTAGTGTTTCAGTGGATATAAATGAAATTAAAAATCAAATACCCAAAGCAATTGGAAAT CAAGAAATTAATATTTGTATAGATCAATTAGCATTTTATGTATTACAAAAAAATGGAAAA GGAAAAAGGAGATTAATAAATGAAGGGAAATTAAGTTTGATTAATTATGATAAGATTGTT GGGTATGAAATTGATTCAAGTAAAGAAATTAAAGTTATTATCTTTATTAGAGTTATAAAA AATGAAAACGTTGTTGTTCTTCATAATATTCCATTTCTTATTTGTATTAAACAAAATTGT ACAATTAAAGAATTAAAAAGAAAAATTGAAAAACGAATGGAATGGATGAAAATGGAGAAT AATAGAATTTGTATTGTTGATGAAGAAGGAAAACAATGTAAACTTTGTGGAGAACGTATT GGATGTACTGGATGTAGTTTAAAAGAAGATATGAAATTAGAAGAGTTAATAACAAAAACA AAAGAGTTATATGTTAGTTATGATTGTGAAGAAAATGATATTATTGATGAACAAATCATT TGTGAAAGTTATAAAATTACAAATAATCAAAGATTACAAACTACTGCAGTAAGTATATTT GCATGTTTAACTTTATTTACTCATGGTGATTCATTTGAAACTATTGATTGGTTTTGTGAC TCTTGTAAGAAAAATGTTAAAGCAGAAGTTGATGTTACAATTTGGCGTCCACCTCAAGTT CTTATTTTTCAATTAAAAAGATTTGAATTTACAGAGAAATATGAACAAATTAAAACTTAT GAACGTGTTGTATTTCCTCCTTTTAAATTTGACCTTAAAGAATATGTTTCAAATACAAGT TTTAAAGAACCAATTCTTTATGATTTATTTGGTATTGTTAATCATCAAGGAAAAATAGAT AAAGGACATTATTACGCTGACTGTAAAGTTGGTACTGATTGGTATAGATTTGATGATGAA AAAGTAACTAAATTAGAAGAGGTACCAACTGGTTCTGATGATGCTTATGTATTGTATTAT CGTCTCATTGAATAA
  • Download Fasta

  • Fasta :-

    MTRYIKRILSSCDEHSRSPHPIEGGTCGLYNLGNTCYLNSPLQCLAHCDIIQSFAYQFPT PFVKSLKPGDKTLYDNNTKIALAFFSVIKALWSNDYVVVTPKALKDLISDKYEQFRGHNQ QDAQEFTLVLLEELNMDLLRNNTNEIMVGTPTRIKLEKTPSEFADCIWNKYLQENNSIIT HTFSGQQQQKITCCECGYSSESFDPFNCISLTIPSIGRQRGFVPLIIVCKQGKPILCKVL VSVSVDINEIKNQIPKAIGNQEINICIDQLAFYVLQKNGKGKRRLINEGKLSLINYDKIV GYEIDSSKEIKVIIFIRVIKNENVVVLHNIPFLICIKQNCTIKELKRKIEKRMEWMKMEN NRICIVDEEGKQCKLCGERIGCTGCSLKEDMKLEELITKTKELYVSYDCEENDIIDEQII CESYKITNNQRLQTTAVSIFACLTLFTHGDSFETIDWFCDSCKKNVKAEVDVTIWRPPQV LIFQLKRFEFTEKYEQIKTYERVVFPPFKFDLKEYVSNTSFKEPILYDLFGIVNHQGKID KGHYYADCKVGTDWYRFDDEKVTKLEEVPTGSDDAYVLYYRLIE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_00943065 SPFVKSLKPG0.991unspEHI_00943065 SPFVKSLKPG0.991unspEHI_00943065 SPFVKSLKPG0.991unspEHI_009430306 SYEIDSSKEI0.996unspEHI_009430520 SVSNTSFKEP0.995unspEHI_00943010 SKRILSSCDE0.996unspEHI_00943018 SEHSRSPHPI0.99unsp

EHI_009430      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India