EHI_010340 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_010340OTHER0.9184170.0787040.002879
No Results

  • Fasta :-

    >EHI_010340 MFLSKLSAFPITQKIAVILIFLVLMLQFGIMLYFRFAPFIKENEIVSTFEKSVGNVTDVA STYLNDEMKITIPSKARIPHGNPRYYQMERGTCWDFALIGFLEDSYRQNGIAKGFLEENE YVRFSTQVLGIRMVEHCKEHPDVCNTPGDSLLLNSTSGGEINWFYSFPGLYNQILPDSVC PYTPTDEDEFVCDKMEEATKTNPIKFNVTKMNIATTVEDVKKLFIQKGKRALAWTSLIHD DFEYFPCTEYADLCNSGLYEIIKCPIKYGNDNCVKITLPMYTPDAEFDRHEEMQMAGGHG MVMVGYNDEFVTKAGFKGGFILKNSWNDTIYGNYPGATGRNARGSHSIEYFMGEISYEEE LLICPNAQDPLNWDTCYGNCYENNTENEFWMSNYNRPYEFKCVNEKICSTDPVYRYFMKS LLPSQKQPNGRYFDICMIRVNSLDNSHIDLCYNALPTQVIALYYTPTDSQLQKLTPPHKD YCGYYFFPYDIVEQQQSYFGGFNCIYYDIDWDDSSYLKNMVDGFDYQYVNKSTGTQNFDE VHFVASAPFINQRY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_010340.fa Sequence name : EHI_010340 Sequence length : 554 VALUES OF COMPUTED PARAMETERS Coef20 : 4.593 CoefTot : 0.074 ChDiff : -25 ZoneTo : 41 KR : 4 DE : 0 CleavSite : 37 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.441 2.876 0.445 0.949 MesoH : -0.116 0.750 -0.293 0.329 MuHd_075 : 23.531 15.459 6.959 4.950 MuHd_095 : 18.866 13.241 5.291 4.928 MuHd_100 : 18.957 15.046 5.930 4.894 MuHd_105 : 17.421 13.510 6.103 4.680 Hmax_075 : 16.625 15.600 2.807 5.190 Hmax_095 : 21.100 23.012 3.664 6.920 Hmax_100 : 21.400 26.800 3.171 7.220 Hmax_105 : 19.500 25.667 3.352 6.940 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8213 0.1787 DFMC : 0.7070 0.2930
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 554 EHI_010340 MFLSKLSAFPITQKIAVILIFLVLMLQFGIMLYFRFAPFIKENEIVSTFEKSVGNVTDVASTYLNDEMKITIPSKARIPH 80 GNPRYYQMERGTCWDFALIGFLEDSYRQNGIAKGFLEENEYVRFSTQVLGIRMVEHCKEHPDVCNTPGDSLLLNSTSGGE 160 INWFYSFPGLYNQILPDSVCPYTPTDEDEFVCDKMEEATKTNPIKFNVTKMNIATTVEDVKKLFIQKGKRALAWTSLIHD 240 DFEYFPCTEYADLCNSGLYEIIKCPIKYGNDNCVKITLPMYTPDAEFDRHEEMQMAGGHGMVMVGYNDEFVTKAGFKGGF 320 ILKNSWNDTIYGNYPGATGRNARGSHSIEYFMGEISYEEELLICPNAQDPLNWDTCYGNCYENNTENEFWMSNYNRPYEF 400 KCVNEKICSTDPVYRYFMKSLLPSQKQPNGRYFDICMIRVNSLDNSHIDLCYNALPTQVIALYYTPTDSQLQKLTPPHKD 480 YCGYYFFPYDIVEQQQSYFGGFNCIYYDIDWDDSSYLKNMVDGFDYQYVNKSTGTQNFDEVHFVASAPFINQRY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_010340 5 --MFLSK|LS 0.058 . EHI_010340 14 AFPITQK|IA 0.058 . EHI_010340 35 GIMLYFR|FA 0.103 . EHI_010340 41 RFAPFIK|EN 0.069 . EHI_010340 51 IVSTFEK|SV 0.176 . EHI_010340 69 YLNDEMK|IT 0.072 . EHI_010340 75 KITIPSK|AR 0.062 . EHI_010340 77 TIPSKAR|IP 0.096 . EHI_010340 84 IPHGNPR|YY 0.151 . EHI_010340 90 RYYQMER|GT 0.094 . EHI_010340 107 FLEDSYR|QN 0.108 . EHI_010340 113 RQNGIAK|GF 0.072 . EHI_010340 123 EENEYVR|FS 0.114 . EHI_010340 132 TQVLGIR|MV 0.122 . EHI_010340 138 RMVEHCK|EH 0.062 . EHI_010340 194 DEFVCDK|ME 0.059 . EHI_010340 200 KMEEATK|TN 0.060 . EHI_010340 205 TKTNPIK|FN 0.078 . EHI_010340 210 IKFNVTK|MN 0.072 . EHI_010340 221 TTVEDVK|KL 0.061 . EHI_010340 222 TVEDVKK|LF 0.110 . EHI_010340 227 KKLFIQK|GK 0.065 . EHI_010340 229 LFIQKGK|RA 0.066 . EHI_010340 230 FIQKGKR|AL 0.126 . EHI_010340 263 GLYEIIK|CP 0.065 . EHI_010340 267 IIKCPIK|YG 0.059 . EHI_010340 275 GNDNCVK|IT 0.058 . EHI_010340 289 PDAEFDR|HE 0.109 . EHI_010340 313 NDEFVTK|AG 0.074 . EHI_010340 317 VTKAGFK|GG 0.062 . EHI_010340 323 KGGFILK|NS 0.056 . EHI_010340 340 YPGATGR|NA 0.136 . EHI_010340 343 ATGRNAR|GS 0.474 . EHI_010340 396 WMSNYNR|PY 0.114 . EHI_010340 401 NRPYEFK|CV 0.094 . EHI_010340 406 FKCVNEK|IC 0.062 . EHI_010340 415 STDPVYR|YF 0.112 . EHI_010340 419 VYRYFMK|SL 0.099 . EHI_010340 426 SLLPSQK|QP 0.061 . EHI_010340 431 QKQPNGR|YF 0.123 . EHI_010340 439 FDICMIR|VN 0.076 . EHI_010340 473 TDSQLQK|LT 0.075 . EHI_010340 479 KLTPPHK|DY 0.070 . EHI_010340 518 DDSSYLK|NM 0.063 . EHI_010340 531 DYQYVNK|ST 0.118 . EHI_010340 553 APFINQR|Y- 0.106 . ____________________________^_________________

  • Fasta :-

    >EHI_010340 ATGTTCTTAAGCAAATTATCTGCATTTCCAATTACACAAAAAATTGCAGTAATTTTAATA TTTTTAGTATTGATGTTACAATTTGGAATAATGTTATATTTTAGATTTGCACCATTTATC AAAGAGAATGAAATAGTATCGACGTTTGAAAAGTCTGTAGGAAATGTAACAGATGTTGCA TCTACATACTTAAATGATGAAATGAAAATAACAATTCCATCTAAAGCAAGAATTCCACAT GGAAATCCACGTTATTATCAAATGGAGAGAGGGACTTGTTGGGATTTTGCATTAATTGGA TTTTTAGAAGATAGTTATAGACAAAATGGTATTGCTAAAGGATTTTTAGAAGAAAATGAA TATGTTAGATTTTCTACACAAGTATTAGGTATTAGAATGGTAGAACATTGTAAAGAACAT CCAGACGTATGTAATACACCAGGAGATTCATTATTACTTAATTCAACATCAGGAGGAGAA ATAAATTGGTTTTATTCATTCCCAGGATTATATAATCAAATTTTACCAGATTCTGTTTGT CCTTATACTCCAACTGATGAAGATGAATTTGTTTGTGATAAAATGGAAGAAGCTACAAAA ACAAATCCAATTAAATTTAATGTAACAAAAATGAATATTGCTACTACTGTTGAAGATGTT AAAAAATTATTTATTCAAAAAGGAAAAAGAGCATTAGCATGGACATCATTAATTCATGAT GATTTTGAATATTTCCCATGTACTGAATATGCTGATCTTTGTAATTCTGGATTATATGAA ATAATTAAATGTCCAATTAAATATGGTAATGATAATTGTGTTAAAATTACATTACCAATG TATACTCCTGATGCAGAATTTGATAGACATGAAGAAATGCAAATGGCAGGTGGACATGGA ATGGTTATGGTTGGATATAATGATGAATTTGTTACAAAAGCTGGATTTAAAGGAGGATTT ATTTTAAAGAATTCATGGAATGATACAATTTATGGTAATTATCCAGGAGCAACTGGTAGA AATGCACGTGGAAGTCATTCAATTGAATATTTTATGGGAGAAATATCATATGAAGAAGAA TTATTAATTTGTCCTAATGCACAAGATCCATTAAATTGGGATACATGTTATGGTAATTGT TATGAAAATAATACAGAAAATGAATTTTGGATGTCAAATTATAATAGACCATATGAATTT AAATGTGTTAATGAAAAGATTTGTTCAACTGATCCAGTTTATAGATATTTCATGAAATCA TTACTTCCATCTCAAAAACAACCAAATGGAAGATATTTTGATATTTGTATGATTCGAGTT AATTCTCTTGATAATTCACATATTGATTTATGTTATAATGCTCTTCCAACTCAAGTTATT GCATTATATTATACTCCAACTGATTCACAATTACAAAAATTAACACCACCACATAAAGAT TATTGTGGATATTATTTCTTCCCTTATGATATCGTTGAACAACAACAATCCTATTTTGGT GGGTTTAATTGCATTTATTATGATATTGATTGGGATGATTCTAGTTATCTTAAAAATATG GTTGATGGTTTTGATTATCAATACGTTAATAAATCAACTGGAACACAGAATTTTGATGAA GTACATTTTGTTGCTTCAGCACCATTTATTAATCAACGCTATTAA
  • Download Fasta

  • Fasta :-

    MFLSKLSAFPITQKIAVILIFLVLMLQFGIMLYFRFAPFIKENEIVSTFEKSVGNVTDVA STYLNDEMKITIPSKARIPHGNPRYYQMERGTCWDFALIGFLEDSYRQNGIAKGFLEENE YVRFSTQVLGIRMVEHCKEHPDVCNTPGDSLLLNSTSGGEINWFYSFPGLYNQILPDSVC PYTPTDEDEFVCDKMEEATKTNPIKFNVTKMNIATTVEDVKKLFIQKGKRALAWTSLIHD DFEYFPCTEYADLCNSGLYEIIKCPIKYGNDNCVKITLPMYTPDAEFDRHEEMQMAGGHG MVMVGYNDEFVTKAGFKGGFILKNSWNDTIYGNYPGATGRNARGSHSIEYFMGEISYEEE LLICPNAQDPLNWDTCYGNCYENNTENEFWMSNYNRPYEFKCVNEKICSTDPVYRYFMKS LLPSQKQPNGRYFDICMIRVNSLDNSHIDLCYNALPTQVIALYYTPTDSQLQKLTPPHKD YCGYYFFPYDIVEQQQSYFGGFNCIYYDIDWDDSSYLKNMVDGFDYQYVNKSTGTQNFDE VHFVASAPFINQRY

    No Results
  • title: active site
  • coordinates: Q87,C93,H299,N324
No Results
No Results
IDSitePeptideScoreMethod
EHI_010340356 SMGEISYEEE0.991unsp

EHI_010340      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India