EHI_019390 | cysteine proteinase, pseudogene

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_IDPredictionOTHERSPmTPCS_Position
EHI_019390OTHER0.5864230.3704020.043175
No Results

  • Fasta :-

    >EHI_019390 MLFYTFSSIGTFEIRIINEKDGDDKILDISGEHIVQCNNENKNK*CDE*FCSNIYSYNI* N*ND*ETIKYKMKVIRHVELM*FNLLKSIIIRESKETMKLKLKQHFHNILLMFQLMNHLL NSNYTKVEQILIFN*E*ILCI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_019390.fa Sequence name : EHI_019390 Sequence length : 141 VALUES OF COMPUTED PARAMETERS Coef20 : 4.223 CoefTot : -0.061 ChDiff : -1 ZoneTo : 12 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.771 1.141 0.006 0.469 MesoH : -1.119 0.176 -0.657 0.116 MuHd_075 : 16.981 11.456 3.654 3.519 MuHd_095 : 15.446 17.301 4.105 6.210 MuHd_100 : 16.751 19.801 5.073 6.908 MuHd_105 : 13.718 16.827 4.577 6.137 Hmax_075 : 18.900 16.900 3.217 6.070 Hmax_095 : 14.400 15.575 1.917 5.556 Hmax_100 : 17.900 16.200 2.926 6.240 Hmax_105 : 20.533 20.650 3.892 7.292 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6571 0.3429 DFMC : 0.7719 0.2281
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 141 EHI_019390 MLFYTFSSIGTFEIRIINEKDGDDKILDISGEHIVQCNNENKNKXCDEXFCSNIYSYNIXNXNDXETIKYKMKVIRHVEL 80 MXFNLLKSIIIRESKETMKLKLKQHFHNILLMFQLMNHLLNSNYTKVEQILIFNXEXILCI 160 ................................................................................ 80 ............................................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_019390 15 IGTFEIR|II 0.088 . EHI_019390 20 IRIINEK|DG 0.080 . EHI_019390 25 EKDGDDK|IL 0.069 . EHI_019390 42 QCNNENK|NK 0.066 . EHI_019390 44 NNENKNK|XC 0.077 . EHI_019390 69 NDXETIK|YK 0.080 . EHI_019390 71 XETIKYK|MK 0.060 . EHI_019390 73 TIKYKMK|VI 0.090 . EHI_019390 76 YKMKVIR|HV 0.193 . EHI_019390 87 MXFNLLK|SI 0.096 . EHI_019390 92 LKSIIIR|ES 0.095 . EHI_019390 95 IIIRESK|ET 0.107 . EHI_019390 99 ESKETMK|LK 0.060 . EHI_019390 101 KETMKLK|LK 0.062 . EHI_019390 103 TMKLKLK|QH 0.065 . EHI_019390 126 LNSNYTK|VE 0.067 . ____________________________^_________________

  • Fasta :-

    >EHI_019390 ATGTTATTTTATACATTTAGTTCAATTGGAACATTTGAAATAAGAATAATAAATGAGAAA GATGGTGATGATAAGATACTTGATATTTCAGGAGAACATATTGTTCAGTGTAATAACGAG AATAAAAATAAATGATGTGATGAATGATTTTGTTCAAATATTTATAGTTATAATATATGA AATTGAAATGATTAAGAAACAATTAAATATAAAATGAAAGTAATCCGACATGTAGAATTG ATGTAATTCAATTTACTAAAATCAATAATTATAAGAGAATCAAAAGAAACAATGAAATTG AAGTTAAAACAACATTTTCACAATATCTTATTGATGTTTCAATTGATGAATCATTTATTA AATTCCAATTATACAAAAGTAGAACAAATATTGATATTCAATTAAGAATAAATTCTTTGT ATTGA
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  • Fasta :-

    MLFYTFSSIGTFEIRIINEKDGDDKILDISGEHIVQCNNENKNK

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IDSitePeptideScoreMethod
EHI_01939094 SIIRESKETM0.995unsp

EHI_019390      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India