EHI_023020 | proteasome subunit alpha type 5, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_023020OTHER0.9998630.0000850.000051
No Results

  • Fasta :-

    >EHI_023020 MFMTKNENDHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLML GSSIEKIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLS LRFGEGSRKKKVMSRPFGVALLIAGVDETGPRLFQTDPSGMFIEFYAKATGAGTEAAQSI LHEKYNKSMTLREAEILALSTLKQVMEEKLNSKNVEVALVTVEKKKFEIMDTAFIENLIG EIKEELI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_023020.fa Sequence name : EHI_023020 Sequence length : 247 VALUES OF COMPUTED PARAMETERS Coef20 : 3.385 CoefTot : -0.247 ChDiff : -9 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.400 1.076 -0.079 0.438 MesoH : -0.713 0.384 -0.391 0.208 MuHd_075 : 20.573 12.388 5.214 4.207 MuHd_095 : 15.137 10.451 5.535 3.132 MuHd_100 : 8.769 9.388 3.366 2.309 MuHd_105 : 4.361 8.828 1.534 2.055 Hmax_075 : 3.700 3.400 -1.236 2.320 Hmax_095 : 7.700 3.500 -0.746 2.410 Hmax_100 : -1.100 0.800 -3.069 1.850 Hmax_105 : -3.800 1.867 -4.483 1.073 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9595 0.0405 DFMC : 0.9456 0.0544
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 247 EHI_023020 MFMTKNENDHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGSSIEKIIEIDDHIGAAVSG 80 LTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVALLIAGVDETGPRLFQTDPSG 160 MFIEFYAKATGAGTEAAQSILHEKYNKSMTLREAEILALSTLKQVMEEKLNSKNVEVALVTVEKKKFEIMDTAFIENLIG 240 EIKEELI 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_023020 5 --MFMTK|NE 0.063 . EHI_023020 20 TFSSEGR|LF 0.112 . EHI_023020 32 YATEAMK|LG 0.066 . EHI_023020 43 VIGIQTK|EG 0.056 . EHI_023020 52 VVLAVEK|RI 0.062 . EHI_023020 53 VLAVEKR|IS 0.203 . EHI_023020 66 LGSSIEK|II 0.070 . EHI_023020 86 GLTADAR|TL 0.092 . EHI_023020 93 TLIDNAR|LE 0.087 . EHI_023020 100 LEAQNHR|FM 0.105 . EHI_023020 122 ISDLSLR|FG 0.094 . EHI_023020 128 RFGEGSR|KK 0.064 . EHI_023020 129 FGEGSRK|KK 0.071 . EHI_023020 130 GEGSRKK|KV 0.136 . EHI_023020 131 EGSRKKK|VM 0.362 . EHI_023020 135 KKKVMSR|PF 0.126 . EHI_023020 152 VDETGPR|LF 0.074 . EHI_023020 168 FIEFYAK|AT 0.079 . EHI_023020 184 QSILHEK|YN 0.068 . EHI_023020 187 LHEKYNK|SM 0.070 . EHI_023020 192 NKSMTLR|EA 0.139 . EHI_023020 203 LALSTLK|QV 0.068 . EHI_023020 209 KQVMEEK|LN 0.066 . EHI_023020 213 EEKLNSK|NV 0.084 . EHI_023020 224 ALVTVEK|KK 0.071 . EHI_023020 225 LVTVEKK|KF 0.096 . EHI_023020 226 VTVEKKK|FE 0.090 . EHI_023020 243 NLIGEIK|EE 0.056 . ____________________________^_________________

  • Fasta :-

    >EHI_023020 ATGTTTATGACTAAAAATGAAAACGATCATGGTGTTAATACCTTTTCATCTGAAGGAAGA TTGTTCCAAGTTGAGTATGCTACAGAAGCAATGAAATTAGGATCAACCGTTATTGGTATT CAAACAAAAGAAGGTGTTGTCCTTGCTGTAGAAAAACGAATTTCATCACCATTAATGCTT GGAAGTAGTATTGAAAAAATTATTGAAATTGATGATCATATTGGAGCAGCTGTTAGTGGA CTAACTGCTGATGCACGTACATTAATTGACAATGCTAGACTTGAAGCACAAAATCATAGA TTTATGTATGATGAACCAATAAATGTAGAAGTTGTTGCTCAAGCCATTTCAGATCTTTCT TTAAGATTTGGAGAAGGATCAAGAAAGAAAAAAGTCATGAGTAGACCATTTGGTGTTGCA TTATTAATTGCAGGTGTTGATGAAACTGGTCCAAGACTTTTCCAAACTGATCCAAGTGGA ATGTTTATTGAATTTTATGCCAAAGCCACAGGAGCAGGAACAGAAGCTGCACAATCAATT TTACATGAAAAATATAATAAATCGATGACATTAAGAGAAGCAGAAATACTTGCATTATCA ACATTAAAACAAGTAATGGAAGAAAAATTAAATTCTAAGAATGTAGAAGTAGCGTTAGTT ACAGTAGAAAAGAAGAAATTTGAAATTATGGATACTGCATTTATTGAAAATTTAATTGGA GAAATCAAAGAAGAATTAATTTAA
  • Download Fasta

  • Fasta :-

    MFMTKNENDHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLML GSSIEKIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLS LRFGEGSRKKKVMSRPFGVALLIAGVDETGPRLFQTDPSGMFIEFYAKATGAGTEAAQSI LHEKYNKSMTLREAEILALSTLKQVMEEKLNSKNVEVALVTVEKKKFEIMDTAFIENLIG EIKEELI

  • title: active site
  • coordinates: S35,E51,R53,K66,A172
No Results
No Results
No Results

EHI_023020      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India