EHI_027780 | signal peptide peptidase family protein

_IDPredictionOTHERSPmTPCS_Position
EHI_027780OTHER0.9998920.0000420.000066
No Results

  • Fasta :-

    >EHI_027780 MFELLQLITLTIIIHYLSCKFKVYFIHWHLDTISQSKLQWKHVVIIPLVGSLFLIFVFFY PSTAKYFIYASVFFSAVSCFCLILQPIFDYVPSLSSKIRICLSLLISLTIIFVYLLTQTR WSSNIIAIGVAVAIQSFLFVDKVHIPLVLLSIMFFYDIFWVFGSANLSLFDGKSVMVEAA KTATSLKLPLLIEFINGQFLIGLGDIILPGIFINYAYCIDLFYKTKYFITTLLGYCFGLV LTLFVLWNFKVGQPALLYLVPSMVIPFLIYAYYSKTIKTVFSLSLTSKFSETNSLPELSL PSDFSHESPVFSEQQLTIQLE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_027780.fa Sequence name : EHI_027780 Sequence length : 321 VALUES OF COMPUTED PARAMETERS Coef20 : 4.330 CoefTot : -1.205 ChDiff : 2 ZoneTo : 170 KR : 9 DE : 5 CleavSite : 122 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.606 2.947 0.581 1.007 MesoH : 1.238 1.624 0.192 0.592 MuHd_075 : 25.497 20.336 8.932 6.054 MuHd_095 : 31.295 26.126 8.715 7.838 MuHd_100 : 28.156 28.014 9.062 8.062 MuHd_105 : 31.434 30.425 9.826 8.424 Hmax_075 : 5.688 14.933 5.350 6.988 Hmax_095 : 19.600 24.500 4.761 7.420 Hmax_100 : 18.700 24.500 5.596 7.760 Hmax_105 : 8.500 15.838 2.041 4.506 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9402 0.0598 DFMC : 0.5899 0.4101
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 321 EHI_027780 MFELLQLITLTIIIHYLSCKFKVYFIHWHLDTISQSKLQWKHVVIIPLVGSLFLIFVFFYPSTAKYFIYASVFFSAVSCF 80 CLILQPIFDYVPSLSSKIRICLSLLISLTIIFVYLLTQTRWSSNIIAIGVAVAIQSFLFVDKVHIPLVLLSIMFFYDIFW 160 VFGSANLSLFDGKSVMVEAAKTATSLKLPLLIEFINGQFLIGLGDIILPGIFINYAYCIDLFYKTKYFITTLLGYCFGLV 240 LTLFVLWNFKVGQPALLYLVPSMVIPFLIYAYYSKTIKTVFSLSLTSKFSETNSLPELSLPSDFSHESPVFSEQQLTIQL 320 E 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 . 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_027780 20 IHYLSCK|FK 0.068 . EHI_027780 22 YLSCKFK|VY 0.076 . EHI_027780 37 DTISQSK|LQ 0.059 . EHI_027780 41 QSKLQWK|HV 0.086 . EHI_027780 65 FYPSTAK|YF 0.060 . EHI_027780 97 VPSLSSK|IR 0.059 . EHI_027780 99 SLSSKIR|IC 0.114 . EHI_027780 120 YLLTQTR|WS 0.087 . EHI_027780 142 SFLFVDK|VH 0.057 . EHI_027780 173 LSLFDGK|SV 0.096 . EHI_027780 181 VMVEAAK|TA 0.063 . EHI_027780 187 KTATSLK|LP 0.058 . EHI_027780 224 CIDLFYK|TK 0.058 . EHI_027780 226 DLFYKTK|YF 0.073 . EHI_027780 250 FVLWNFK|VG 0.055 . EHI_027780 275 IYAYYSK|TI 0.065 . EHI_027780 278 YYSKTIK|TV 0.073 . EHI_027780 288 SLSLTSK|FS 0.080 . ____________________________^_________________

  • Fasta :-

    >EHI_027780 ATGTTCGAGCTTCTTCAGCTGATTACTCTTACTATAATTATTCATTATTTATCTTGTAAA TTTAAAGTATATTTTATTCATTGGCATTTAGATACTATTTCTCAATCAAAATTACAATGG AAACATGTGGTTATTATTCCTTTGGTTGGTTCATTATTTCTTATATTTGTTTTCTTTTAT CCATCTACAGCTAAATATTTTATTTATGCGTCTGTATTTTTTTCTGCAGTTTCTTGTTTT TGTTTAATACTTCAACCAATTTTTGATTATGTCCCATCACTATCTTCAAAAATAAGAATT TGTTTATCTTTGTTAATTTCATTGACAATTATTTTTGTTTATCTTCTCACACAAACACGC TGGAGTTCTAATATTATTGCTATTGGAGTTGCAGTAGCAATTCAATCTTTTCTGTTTGTT GATAAAGTTCATATCCCATTAGTTCTTCTTTCTATTATGTTCTTTTATGATATCTTTTGG GTATTTGGTTCAGCTAATCTTTCATTATTTGATGGTAAATCAGTAATGGTTGAAGCTGCA AAAACAGCAACATCATTAAAACTTCCTTTATTAATAGAATTCATTAATGGACAATTTTTA ATTGGATTAGGAGATATTATTCTTCCAGGTATATTTATTAACTATGCTTATTGCATTGAT TTGTTTTATAAAACGAAATATTTCATTACAACTTTGCTTGGCTATTGTTTTGGTTTAGTC TTAACATTATTTGTTTTATGGAATTTTAAAGTTGGTCAACCAGCTTTACTTTATCTTGTT CCTTCAATGGTTATTCCTTTCTTAATTTATGCTTATTATTCAAAAACAATCAAAACAGTC TTCTCTCTTAGTTTAACTTCTAAGTTTAGTGAGACAAATTCTCTTCCTGAACTTAGTCTA CCTTCTGACTTCTCACATGAATCTCCTGTCTTTTCAGAACAACAACTAACTATTCAGTTA GAATAA
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  • Fasta :-

    MFELLQLITLTIIIHYLSCKFKVYFIHWHLDTISQSKLQWKHVVIIPLVGSLFLIFVFFY PSTAKYFIYASVFFSAVSCFCLILQPIFDYVPSLSSKIRICLSLLISLTIIFVYLLTQTR WSSNIIAIGVAVAIQSFLFVDKVHIPLVLLSIMFFYDIFWVFGSANLSLFDGKSVMVEAA KTATSLKLPLLIEFINGQFLIGLGDIILPGIFINYAYCIDLFYKTKYFITTLLGYCFGLV LTLFVLWNFKVGQPALLYLVPSMVIPFLIYAYYSKTIKTVFSLSLTSKFSETNSLPELSL PSDFSHESPVFSEQQLTIQLE

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EHI_027780      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India