EHI_029210 | proteasome subunit alpha type 3, putative

UniProt_ID: C4MAW8

Computed_GO_Component_IDs: GO:0005839 GO:0019773
Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex
Computed_GO_Function_IDs: GO:0004175 GO:0004298
Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity
Computed_GO_Process_IDs: GO:0051603 GO:0006511
Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	EHI_029210	OTHER	0.999939	0.000059	0.000002

No Results

Fasta :-
>EHI_029210 MSSIGSGYDDSCTTFSPDGKVFQIDYATKAVENSATALSIKCIDGVVFGVEKLIISKMIE KSSNKRIFNVGTHVGITCAGFLPDARKLVKKANEEAESFKENYGMNIPVKVLAEKIAMYM QNHTLYGSLRPFGCSLLIGGVDQHGYSLHYIEPSGTTYGYFANGIGKGKQICKNELEKIN FSQITCEEALVKLVEIIDLCHGEWKDKPYEIELSWISEKTNNIVKKVDKEMKQKIIDQVR NKQIHEN
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_029210.fa Sequence name : EHI_029210 Sequence length : 247 VALUES OF COMPUTED PARAMETERS Coef20 : 3.240 CoefTot : -0.321 ChDiff : 0 ZoneTo : 8 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.329 1.400 0.190 0.570 MesoH : -0.454 0.350 -0.358 0.210 MuHd_075 : 19.182 4.416 4.630 0.946 MuHd_095 : 21.989 17.134 7.107 4.791 MuHd_100 : 16.779 15.367 5.349 4.570 MuHd_105 : 9.573 10.600 2.996 3.785 Hmax_075 : 7.525 -0.700 1.039 1.435 Hmax_095 : 13.100 9.200 2.995 4.090 Hmax_100 : 13.100 9.200 2.995 4.090 Hmax_105 : 2.713 2.188 -0.173 2.494 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9632 0.0368 DFMC : 0.9409 0.0591

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 247 EHI_029210 MSSIGSGYDDSCTTFSPDGKVFQIDYATKAVENSATALSIKCIDGVVFGVEKLIISKMIEKSSNKRIFNVGTHVGITCAG 80 FLPDARKLVKKANEEAESFKENYGMNIPVKVLAEKIAMYMQNHTLYGSLRPFGCSLLIGGVDQHGYSLHYIEPSGTTYGY 160 FANGIGKGKQICKNELEKINFSQITCEEALVKLVEIIDLCHGEWKDKPYEIELSWISEKTNNIVKKVDKEMKQKIIDQVR 240 NKQIHEN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_029210 20 TFSPDGK|VF 0.064 . EHI_029210 29 QIDYATK|AV 0.082 . EHI_029210 41 ATALSIK|CI 0.083 . EHI_029210 52 VVFGVEK|LI 0.059 . EHI_029210 57 EKLIISK|MI 0.062 . EHI_029210 61 ISKMIEK|SS 0.077 . EHI_029210 65 IEKSSNK|RI 0.068 . EHI_029210 66 EKSSNKR|IF 0.220 . EHI_029210 86 GFLPDAR|KL 0.076 . EHI_029210 87 FLPDARK|LV 0.095 . EHI_029210 90 DARKLVK|KA 0.071 . EHI_029210 91 ARKLVKK|AN 0.180 . EHI_029210 100 EEAESFK|EN 0.066 . EHI_029210 110 GMNIPVK|VL 0.075 . EHI_029210 115 VKVLAEK|IA 0.070 . EHI_029210 130 TLYGSLR|PF 0.122 . EHI_029210 167 FANGIGK|GK 0.066 . EHI_029210 169 NGIGKGK|QI 0.077 . EHI_029210 173 KGKQICK|NE 0.059 . EHI_029210 178 CKNELEK|IN 0.069 . EHI_029210 192 CEEALVK|LV 0.075 . EHI_029210 205 LCHGEWK|DK 0.073 . EHI_029210 207 HGEWKDK|PY 0.080 . EHI_029210 219 LSWISEK|TN 0.064 . EHI_029210 225 KTNNIVK|KV 0.093 . EHI_029210 226 TNNIVKK|VD 0.130 . EHI_029210 229 IVKKVDK|EM 0.067 . EHI_029210 232 KVDKEMK|QK 0.063 . EHI_029210 234 DKEMKQK|II 0.085 . EHI_029210 240 KIIDQVR|NK 0.094 . EHI_029210 242 IDQVRNK|QI 0.079 . ____________________________^_________________

Fasta :-
>EHI_029210 ATGAGTTCAATTGGATCAGGATATGATGATTCATGTACAACCTTTTCACCTGACGGAAAG GTATTTCAAATTGACTATGCGACAAAAGCAGTTGAAAATAGTGCAACAGCACTTTCAATT AAATGTATTGATGGAGTAGTATTTGGAGTAGAGAAGTTAATAATATCAAAAATGATTGAA AAATCATCAAATAAACGTATATTTAATGTTGGTACTCATGTCGGAATCACTTGTGCTGGA TTTCTTCCTGATGCAAGAAAATTAGTTAAGAAAGCAAATGAAGAAGCTGAATCATTCAAA GAAAATTATGGAATGAATATTCCAGTAAAAGTATTAGCAGAAAAGATTGCTATGTACATG CAAAATCATACATTATATGGATCATTAAGACCATTTGGATGTAGTTTATTGATAGGAGGA GTTGATCAACATGGATATTCCCTTCATTATATTGAACCATCAGGAACAACATATGGGTAT TTTGCTAATGGAATTGGTAAAGGAAAACAAATATGTAAAAACGAATTAGAAAAAATAAAC TTCTCACAAATCACATGTGAAGAGGCATTAGTGAAACTTGTAGAAATTATTGATTTATGT CATGGTGAATGGAAAGATAAACCATATGAGATTGAGTTAAGTTGGATTTCAGAAAAGACT AATAACATAGTTAAGAAAGTTGATAAAGAAATGAAACAAAAAATTATTGACCAAGTTCGT AATAAACAAATACATGAGAATTAATTCAATTTTGTCTTTTTTAC
Download Fasta

Fasta :-

MSSIGSGYDDSCTTFSPDGKVFQIDYATKAVENSATALSIKCIDGVVFGVEKLIISKMIE KSSNKRIFNVGTHVGITCAGFLPDARKLVKKANEEAESFKENYGMNIPVKVLAEKIAMYM QNHTLYGSLRPFGCSLLIGGVDQHGYSLHYIEPSGTTYGYFANGIGKGKQICKNELEKIN FSQITCEEALVKLVEIIDLCHGEWKDKPYEIELSWISEKTNNIVKKVDKEMKQKIIDQVR NKQIHEN

Proteasome subunits

title: active site
coordinates: A35,E51,L53,R66,K167

	ID	Site	Position	Gscore	Iscore
	EHI_029210	S	2	0.522	0.053

	ID	Site	Position	Gscore	Iscore
	EHI_029210	S	2	0.522	0.053

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	EHI_029210	98 S	EEAESFKEN	0.996	unsp	EHI_029210	98 S	EEAESFKEN	0.996	unsp	EHI_029210	98 S	EEAESFKEN	0.996	unsp	EHI_029210	6 S	SSIGSGYDD	0.993	unsp	EHI_029210	63 S	IEKSSNKRI	0.99	unsp

EHI_029210 | proteasome subunit alpha type 3, putative

ID's

UniProt_ID: C4MAW8

GEO Functions

Computed_GO_Component_IDs: GO:0005839 GO:0019773

Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex

Computed_GO_Function_IDs: GO:0004175 GO:0004298

Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity

Computed_GO_Process_IDs: GO:0051603 GO:0006511

Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Proteasome subunits

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

EHI_029210

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India