EHI_030720 | cysteine protease, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_030720SP0.0098990.9900170.000085CS pos: 16-17. SFS-KQ. Pr: 0.2630
No Results

  • Fasta :-

    >EHI_030720 MSILFIITFLLIFSFSKQTTNTNEIIKIKFETYWSKWKSDNKKVYNSISEELTRKAIFLS NLKRINQLNSQRIDTDDAVFGINAFSDLKPEEFARRFNKINLKSLKPKQTTHYKLPVPSG EVPTQYSACLQNKLLGQNSSNNIDLCGGIVMDQGDCGNCYAVSNAHELQLKYANLTLTQR GKVEYEMFSPQQLMDCTENSYYCEGGTSDEPLMSSHYVVFEKDYPYISYSNTLVNNSCIH DKPTPMMVSFSLFDSAQNFEVLKRIIYHYGSFITSVKASSDWLYYHSGIYSHSCTKNVIT NHVIEVIGYGNQNGKEYLIARNSWGKNWGIDGFIKISAKSLCGIGGDDGGMYPVSLVQHA DFSDIPKGVYGKKSYKQEVQPKLYNGTDKYDIYEQFPEVSGNSFIDIIINFIVTIALYVG LICWVICVIVILVMSCVVIYLKKN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_030720.fa Sequence name : EHI_030720 Sequence length : 444 VALUES OF COMPUTED PARAMETERS Coef20 : 4.959 CoefTot : 0.166 ChDiff : 1 ZoneTo : 23 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.524 3.271 0.788 0.972 MesoH : -0.076 0.901 -0.163 0.401 MuHd_075 : 19.051 14.282 5.546 3.983 MuHd_095 : 17.527 8.695 5.477 2.725 MuHd_100 : 18.841 7.334 5.004 3.009 MuHd_105 : 20.628 10.969 5.436 4.067 Hmax_075 : 18.500 15.750 2.891 5.215 Hmax_095 : 17.900 18.000 3.449 6.100 Hmax_100 : 19.100 16.300 3.021 6.170 Hmax_105 : 19.100 15.900 3.021 6.170 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9506 0.0494 DFMC : 0.9680 0.0320
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 444 EHI_030720 MSILFIITFLLIFSFSKQTTNTNEIIKIKFETYWSKWKSDNKKVYNSISEELTRKAIFLSNLKRINQLNSQRIDTDDAVF 80 GINAFSDLKPEEFARRFNKINLKSLKPKQTTHYKLPVPSGEVPTQYSACLQNKLLGQNSSNNIDLCGGIVMDQGDCGNCY 160 AVSNAHELQLKYANLTLTQRGKVEYEMFSPQQLMDCTENSYYCEGGTSDEPLMSSHYVVFEKDYPYISYSNTLVNNSCIH 240 DKPTPMMVSFSLFDSAQNFEVLKRIIYHYGSFITSVKASSDWLYYHSGIYSHSCTKNVITNHVIEVIGYGNQNGKEYLIA 320 RNSWGKNWGIDGFIKISAKSLCGIGGDDGGMYPVSLVQHADFSDIPKGVYGKKSYKQEVQPKLYNGTDKYDIYEQFPEVS 400 GNSFIDIIINFIVTIALYVGLICWVICVIVILVMSCVVIYLKKN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_030720 17 LIFSFSK|QT 0.061 . EHI_030720 27 NTNEIIK|IK 0.061 . EHI_030720 29 NEIIKIK|FE 0.065 . EHI_030720 36 FETYWSK|WK 0.067 . EHI_030720 38 TYWSKWK|SD 0.083 . EHI_030720 42 KWKSDNK|KV 0.075 . EHI_030720 43 WKSDNKK|VY 0.110 . EHI_030720 54 ISEELTR|KA 0.078 . EHI_030720 55 SEELTRK|AI 0.074 . EHI_030720 63 IFLSNLK|RI 0.054 . EHI_030720 64 FLSNLKR|IN 0.136 . EHI_030720 72 NQLNSQR|ID 0.073 . EHI_030720 89 NAFSDLK|PE 0.056 . EHI_030720 95 KPEEFAR|RF 0.097 . EHI_030720 96 PEEFARR|FN 0.149 . EHI_030720 99 FARRFNK|IN 0.155 . EHI_030720 103 FNKINLK|SL 0.088 . EHI_030720 106 INLKSLK|PK 0.060 . EHI_030720 108 LKSLKPK|QT 0.097 . EHI_030720 114 KQTTHYK|LP 0.061 . EHI_030720 133 SACLQNK|LL 0.072 . EHI_030720 171 AHELQLK|YA 0.070 . EHI_030720 180 NLTLTQR|GK 0.079 . EHI_030720 182 TLTQRGK|VE 0.059 . EHI_030720 222 HYVVFEK|DY 0.067 . EHI_030720 242 NSCIHDK|PT 0.070 . EHI_030720 263 QNFEVLK|RI 0.064 . EHI_030720 264 NFEVLKR|II 0.187 . EHI_030720 277 SFITSVK|AS 0.072 . EHI_030720 296 YSHSCTK|NV 0.075 . EHI_030720 315 YGNQNGK|EY 0.067 . EHI_030720 321 KEYLIAR|NS 0.096 . EHI_030720 326 ARNSWGK|NW 0.084 . EHI_030720 335 GIDGFIK|IS 0.067 . EHI_030720 339 FIKISAK|SL 0.107 . EHI_030720 367 DFSDIPK|GV 0.088 . EHI_030720 372 PKGVYGK|KS 0.077 . EHI_030720 373 KGVYGKK|SY 0.139 . EHI_030720 376 YGKKSYK|QE 0.057 . EHI_030720 382 KQEVQPK|LY 0.065 . EHI_030720 389 LYNGTDK|YD 0.073 . EHI_030720 442 CVVIYLK|KN 0.056 . EHI_030720 443 VVIYLKK|N- 0.085 . ____________________________^_________________

  • Fasta :-

    >EHI_030720 ATGTCAATTTTGTTTATCATTACTTTTCTGTTAATCTTCTCTTTTTCTAAACAAACAACT AACACAAATGAAATTATAAAAATAAAGTTTGAAACTTATTGGAGTAAATGGAAAAGTGAT AACAAGAAAGTATATAATTCTATATCTGAAGAACTAACTCGTAAAGCAATATTTCTTTCA AACCTTAAAAGAATTAATCAATTAAATTCTCAAAGAATTGACACAGACGATGCTGTATTT GGAATAAATGCTTTTAGTGATCTAAAACCTGAGGAATTTGCAAGAAGATTTAATAAAATT AACTTAAAATCACTTAAACCAAAACAAACAACTCATTACAAACTTCCTGTTCCAAGTGGA GAAGTTCCTACACAATATTCTGCTTGTCTTCAAAACAAACTATTAGGTCAAAATTCTTCA AACAATATAGACTTGTGTGGTGGAATAGTGATGGACCAAGGTGATTGTGGTAATTGTTAT GCTGTTTCTAATGCACATGAACTCCAACTAAAATATGCTAATTTAACTTTAACTCAAAGA GGAAAGGTTGAATATGAAATGTTCAGTCCTCAACAACTTATGGACTGTACAGAGAATAGT TATTATTGTGAGGGAGGTACTTCAGATGAACCGTTAATGTCTTCTCATTACGTTGTATTT GAAAAAGATTATCCATACATTTCTTATTCCAATACCTTAGTTAATAATTCTTGTATCCAT GATAAACCTACACCAATGATGGTTTCATTTTCATTATTTGATTCAGCACAGAATTTTGAA GTTTTAAAAAGAATAATATACCATTATGGCTCTTTTATTACTTCTGTAAAAGCATCATCT GACTGGTTGTATTACCATTCTGGAATTTATTCACATAGCTGTACAAAAAATGTTATCACT AATCATGTTATTGAGGTTATTGGGTATGGCAACCAAAATGGAAAAGAATATCTTATTGCT AGAAATTCTTGGGGAAAAAATTGGGGTATTGATGGTTTTATAAAGATTTCTGCTAAATCA CTCTGTGGAATTGGAGGTGATGATGGTGGAATGTATCCAGTGTCTCTTGTCCAACACGCT GATTTTAGTGATATCCCAAAAGGTGTATACGGAAAAAAATCGTATAAACAAGAGGTTCAA CCTAAATTATACAATGGAACTGATAAGTATGATATTTATGAACAATTTCCTGAAGTGTCA GGAAATTCGTTCATTGATATTATTATCAATTTTATAGTTACAATAGCATTATACGTTGGT TTAATTTGTTGGGTAATTTGTGTCATTGTCATTTTGGTAATGTCTTGTGTTGTTATTTAT TTAAAAAAAAATTAA
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  • Fasta :-

    MSILFIITFLLIFSFSKQTTNTNEIIKIKFETYWSKWKSDNKKVYNSISEELTRKAIFLS NLKRINQLNSQRIDTDDAVFGINAFSDLKPEEFARRFNKINLKSLKPKQTTHYKLPVPSG EVPTQYSACLQNKLLGQNSSNNIDLCGGIVMDQGDCGNCYAVSNAHELQLKYANLTLTQR GKVEYEMFSPQQLMDCTENSYYCEGGTSDEPLMSSHYVVFEKDYPYISYSNTLVNNSCIH DKPTPMMVSFSLFDSAQNFEVLKRIIYHYGSFITSVKASSDWLYYHSGIYSHSCTKNVIT NHVIEVIGYGNQNGKEYLIARNSWGKNWGIDGFIKISAKSLCGIGGDDGGMYPVSLVQHA DFSDIPKGVYGKKSYKQEVQPKLYNGTDKYDIYEQFPEVSGNSFIDIIINFIVTIALYVG LICWVICVIVILVMSCVVIYLKKN

  • title: active site
  • coordinates: Q153,C159,H302,N322
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_03072047 SKVYNSISEE0.991unspEHI_030720374 SYGKKSYKQE0.99unsp

EHI_030720      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India