EHI_035750 | lecithin:cholesterol acyltransferase domain-containing protein

_IDPredictionOTHERSPmTPCS_Position
EHI_035750SP0.0093160.9904000.000284CS pos: 13-14. TWG-KV. Pr: 0.4767
No Results

  • Fasta :-

    >EHI_035750 MFFLYLLLSITWGKVVQKSELKKDTCDSRSPVVLIPGLMASIIEAKINVADDFQPWPKSG KCEKNKDWFRAWVNVDIAVPWKSECYINYLSGIWNNQTNKLETIPGIDLRIPEFGSTYAC DQLDPVFLIGSFTNSFHKIIEHLKSVGYKDQIDMFGASYDWRTVDLPKTYFEGVKGLIYE GFKNSGKKVVIISHSMGGFVSYKLFDYLGKDFCDKYIQKWIAISAPFIGTGVVPKQMTVG ENLGLPIKAEYARDLSRSIESVLALSPNEEKWNDDILVRIKSNGKTYTAKQLREVYKQIP ELKDKTDYILDTEMTPLYKKWNWTIPNGVKMDCVYSHGKETPYSIEFDTEDLTKGYTVNY SDGDNLVNINSLESCKIFTDSVTNLGKHGHLLILNSNDIWNYIKPKVCGNYD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_035750.fa Sequence name : EHI_035750 Sequence length : 412 VALUES OF COMPUTED PARAMETERS Coef20 : 4.206 CoefTot : -0.076 ChDiff : -2 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.259 1.629 0.055 0.599 MesoH : -0.518 0.302 -0.386 0.253 MuHd_075 : 23.334 15.401 6.120 5.149 MuHd_095 : 18.521 10.533 4.956 3.392 MuHd_100 : 18.032 5.381 4.499 3.325 MuHd_105 : 20.043 7.481 5.304 4.067 Hmax_075 : 14.467 14.467 2.312 5.660 Hmax_095 : 17.800 18.200 2.353 6.360 Hmax_100 : 15.400 15.700 1.563 6.110 Hmax_105 : 17.500 16.900 3.210 6.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8172 0.1828 DFMC : 0.8225 0.1775
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 412 EHI_035750 MFFLYLLLSITWGKVVQKSELKKDTCDSRSPVVLIPGLMASIIEAKINVADDFQPWPKSGKCEKNKDWFRAWVNVDIAVP 80 WKSECYINYLSGIWNNQTNKLETIPGIDLRIPEFGSTYACDQLDPVFLIGSFTNSFHKIIEHLKSVGYKDQIDMFGASYD 160 WRTVDLPKTYFEGVKGLIYEGFKNSGKKVVIISHSMGGFVSYKLFDYLGKDFCDKYIQKWIAISAPFIGTGVVPKQMTVG 240 ENLGLPIKAEYARDLSRSIESVLALSPNEEKWNDDILVRIKSNGKTYTAKQLREVYKQIPELKDKTDYILDTEMTPLYKK 320 WNWTIPNGVKMDCVYSHGKETPYSIEFDTEDLTKGYTVNYSDGDNLVNINSLESCKIFTDSVTNLGKHGHLLILNSNDIW 400 NYIKPKVCGNYD 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_035750 14 LSITWGK|VV 0.081 . EHI_035750 18 WGKVVQK|SE 0.076 . EHI_035750 22 VQKSELK|KD 0.053 . EHI_035750 23 QKSELKK|DT 0.226 . EHI_035750 29 KDTCDSR|SP 0.098 . EHI_035750 46 ASIIEAK|IN 0.065 . EHI_035750 58 DFQPWPK|SG 0.067 . EHI_035750 61 PWPKSGK|CE 0.058 . EHI_035750 64 KSGKCEK|NK 0.072 . EHI_035750 66 GKCEKNK|DW 0.095 . EHI_035750 70 KNKDWFR|AW 0.096 . EHI_035750 82 DIAVPWK|SE 0.077 . EHI_035750 100 WNNQTNK|LE 0.059 . EHI_035750 110 IPGIDLR|IP 0.086 . EHI_035750 138 FTNSFHK|II 0.070 . EHI_035750 144 KIIEHLK|SV 0.112 . EHI_035750 149 LKSVGYK|DQ 0.108 . EHI_035750 162 GASYDWR|TV 0.130 . EHI_035750 168 RTVDLPK|TY 0.071 . EHI_035750 175 TYFEGVK|GL 0.065 . EHI_035750 183 LIYEGFK|NS 0.065 . EHI_035750 187 GFKNSGK|KV 0.074 . EHI_035750 188 FKNSGKK|VV 0.163 . EHI_035750 203 GGFVSYK|LF 0.068 . EHI_035750 210 LFDYLGK|DF 0.072 . EHI_035750 215 GKDFCDK|YI 0.073 . EHI_035750 219 CDKYIQK|WI 0.066 . EHI_035750 235 GTGVVPK|QM 0.082 . EHI_035750 248 NLGLPIK|AE 0.058 . EHI_035750 253 IKAEYAR|DL 0.194 . EHI_035750 257 YARDLSR|SI 0.168 . EHI_035750 271 LSPNEEK|WN 0.070 . EHI_035750 279 NDDILVR|IK 0.086 . EHI_035750 281 DILVRIK|SN 0.082 . EHI_035750 285 RIKSNGK|TY 0.061 . EHI_035750 290 GKTYTAK|QL 0.082 . EHI_035750 293 YTAKQLR|EV 0.187 . EHI_035750 297 QLREVYK|QI 0.075 . EHI_035750 303 KQIPELK|DK 0.076 . EHI_035750 305 IPELKDK|TD 0.064 . EHI_035750 319 EMTPLYK|KW 0.059 . EHI_035750 320 MTPLYKK|WN 0.104 . EHI_035750 330 TIPNGVK|MD 0.060 . EHI_035750 339 CVYSHGK|ET 0.059 . EHI_035750 354 DTEDLTK|GY 0.062 . EHI_035750 376 NSLESCK|IF 0.064 . EHI_035750 387 SVTNLGK|HG 0.058 . EHI_035750 404 DIWNYIK|PK 0.057 . EHI_035750 406 WNYIKPK|VC 0.073 . ____________________________^_________________

  • Fasta :-

    >EHI_035750 ATGTTCTTCCTGTATTTATTACTTTCTATTACATGGGGGAAAGTAGTTCAAAAGTCAGAG TTGAAAAAAGATACTTGTGATAGTAGATCGCCAGTTGTGTTAATTCCTGGTTTGATGGCA TCCATTATTGAAGCAAAAATAAATGTTGCAGATGATTTTCAACCATGGCCAAAATCAGGG AAGTGTGAGAAAAATAAAGATTGGTTTAGGGCATGGGTTAATGTAGATATTGCAGTTCCA TGGAAGAGTGAGTGTTATATCAATTATTTGAGTGGAATATGGAATAATCAAACCAATAAG CTAGAAACTATTCCTGGTATTGATTTAAGAATACCAGAATTTGGATCAACTTATGCATGT GACCAATTAGACCCAGTGTTTTTAATTGGTTCTTTTACTAATTCATTTCATAAAATTATT GAACATTTGAAAAGTGTAGGATATAAAGACCAAATTGATATGTTTGGAGCTTCTTATGAC TGGAGAACAGTTGATTTACCAAAAACATACTTTGAAGGAGTTAAAGGACTTATTTATGAA GGCTTTAAGAATAGTGGGAAGAAAGTTGTTATTATTTCTCATTCTATGGGTGGTTTTGTA TCTTACAAATTATTTGATTATCTTGGAAAAGATTTTTGTGATAAATACATTCAAAAATGG ATTGCAATTTCTGCTCCATTCATTGGAACAGGGGTAGTTCCAAAACAAATGACAGTTGGA GAAAATTTAGGACTTCCAATCAAAGCAGAATATGCACGAGATCTTTCTAGATCAATTGAG TCAGTGTTAGCGTTATCTCCAAATGAAGAGAAGTGGAATGATGATATACTTGTTAGAATT AAAAGTAATGGAAAAACTTATACTGCTAAACAATTGAGAGAGGTATATAAACAAATTCCA GAGTTAAAAGATAAAACTGACTATATTTTAGATACTGAAATGACACCATTATATAAGAAA TGGAATTGGACTATTCCAAATGGAGTTAAAATGGATTGTGTTTATTCTCATGGCAAAGAA ACTCCTTATTCTATAGAATTTGATACGGAAGACTTAACAAAAGGTTATACCGTTAATTAT TCTGATGGAGATAATTTAGTTAATATTAATTCATTAGAATCATGTAAAATATTTACTGAT TCTGTGACTAACCTTGGTAAACATGGACATTTATTAATTTTAAATTCTAATGATATTTGG AATTATATTAAACCTAAAGTATGTGGTAATTATGATTAA
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  • Fasta :-

    MFFLYLLLSITWGKVVQKSELKKDTCDSRSPVVLIPGLMASIIEAKINVADDFQPWPKSG KCEKNKDWFRAWVNVDIAVPWKSECYINYLSGIWNNQTNKLETIPGIDLRIPEFGSTYAC DQLDPVFLIGSFTNSFHKIIEHLKSVGYKDQIDMFGASYDWRTVDLPKTYFEGVKGLIYE GFKNSGKKVVIISHSMGGFVSYKLFDYLGKDFCDKYIQKWIAISAPFIGTGVVPKQMTVG ENLGLPIKAEYARDLSRSIESVLALSPNEEKWNDDILVRIKSNGKTYTAKQLREVYKQIP ELKDKTDYILDTEMTPLYKKWNWTIPNGVKMDCVYSHGKETPYSIEFDTEDLTKGYTVNY SDGDNLVNINSLESCKIFTDSVTNLGKHGHLLILNSNDIWNYIKPKVCGNYD

    No Results
No Results
No Results
IDSitePeptideScoreMethod
EHI_035750266 SVLALSPNEE0.995unsp

EHI_035750      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India