EHI_037190 | serine carboxypeptidase (S28) family protein

_IDPredictionOTHERSPmTPCS_Position
EHI_037190SP0.0855670.9095520.004882CS pos: 13-14. AYA-SL. Pr: 0.3665
No Results

  • Fasta :-

    >EHI_037190 MFLFILLFLSAYASLTLHQKQFYKRLSHSLKSDIPNVKTLTYTVPLDHFNANNQIDFDIQ YFISTDYLDNNSPNAPLFVLLGGEGPEDETGLQNYFVVTDLAKKHKGLMLSVEHRFYGAS TPSLEMDKLIYCTAEQALMDYVEVISHVQEENNLVGHPVIVLGGSYSGNLAAWMRQKYPN VVEGAWASSAPVEAVVDFYQYLEVVQNALPKNTADLLSFAFEQWDKMTTTEEGRKELGKI FNTCTEFGEKDIQTFAESIGTALSGYVQYNSSNWKPSYESTDSICAEINEDIVNKYPLFI KEKYNPEWADKECTPSSQEESYKTLQNTSTYAEGNEDASGRSWFFQTCIAYGYYQAVSEQ SSVKWGKLNQLQGSIDMCKDIYGIDKDTLYNAVDHINVRYGGKKPCVTNVAFTNGNTDPW HALGVTESDHQEGNLVQLIDRTSHCSDLYSEKENDVPELKKARHNELKFFAQVLANVPQN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_037190.fa Sequence name : EHI_037190 Sequence length : 480 VALUES OF COMPUTED PARAMETERS Coef20 : 4.563 CoefTot : -0.392 ChDiff : -26 ZoneTo : 46 KR : 5 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.312 2.212 0.350 0.784 MesoH : -0.470 0.228 -0.407 0.249 MuHd_075 : 30.785 17.729 8.143 7.785 MuHd_095 : 38.739 33.000 13.531 10.147 MuHd_100 : 30.499 28.164 10.967 8.701 MuHd_105 : 29.040 26.455 10.601 8.190 Hmax_075 : 9.450 11.667 0.465 4.643 Hmax_095 : 14.900 17.000 2.860 5.980 Hmax_100 : 8.500 14.300 0.676 5.260 Hmax_105 : 2.000 17.267 0.130 2.450 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3079 0.6921 DFMC : 0.3302 0.6698 This protein is probably imported in chloroplast. f(Ser) = 0.1087 f(Arg) = 0.0217 CMi = 1.08225 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 480 EHI_037190 MFLFILLFLSAYASLTLHQKQFYKRLSHSLKSDIPNVKTLTYTVPLDHFNANNQIDFDIQYFISTDYLDNNSPNAPLFVL 80 LGGEGPEDETGLQNYFVVTDLAKKHKGLMLSVEHRFYGASTPSLEMDKLIYCTAEQALMDYVEVISHVQEENNLVGHPVI 160 VLGGSYSGNLAAWMRQKYPNVVEGAWASSAPVEAVVDFYQYLEVVQNALPKNTADLLSFAFEQWDKMTTTEEGRKELGKI 240 FNTCTEFGEKDIQTFAESIGTALSGYVQYNSSNWKPSYESTDSICAEINEDIVNKYPLFIKEKYNPEWADKECTPSSQEE 320 SYKTLQNTSTYAEGNEDASGRSWFFQTCIAYGYYQAVSEQSSVKWGKLNQLQGSIDMCKDIYGIDKDTLYNAVDHINVRY 400 GGKKPCVTNVAFTNGNTDPWHALGVTESDHQEGNLVQLIDRTSHCSDLYSEKENDVPELKKARHNELKFFAQVLANVPQN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_037190 20 SLTLHQK|QF 0.067 . EHI_037190 24 HQKQFYK|RL 0.077 . EHI_037190 25 QKQFYKR|LS 0.164 . EHI_037190 31 RLSHSLK|SD 0.125 . EHI_037190 38 SDIPNVK|TL 0.061 . EHI_037190 103 VVTDLAK|KH 0.055 . EHI_037190 104 VTDLAKK|HK 0.086 . EHI_037190 106 DLAKKHK|GL 0.082 . EHI_037190 115 MLSVEHR|FY 0.231 . EHI_037190 128 PSLEMDK|LI 0.057 . EHI_037190 175 NLAAWMR|QK 0.098 . EHI_037190 177 AAWMRQK|YP 0.079 . EHI_037190 211 VQNALPK|NT 0.072 . EHI_037190 226 AFEQWDK|MT 0.067 . EHI_037190 234 TTTEEGR|KE 0.071 . EHI_037190 235 TTEEGRK|EL 0.105 . EHI_037190 239 GRKELGK|IF 0.075 . EHI_037190 250 CTEFGEK|DI 0.064 . EHI_037190 275 YNSSNWK|PS 0.076 . EHI_037190 295 NEDIVNK|YP 0.058 . EHI_037190 301 KYPLFIK|EK 0.058 . EHI_037190 303 PLFIKEK|YN 0.064 . EHI_037190 311 NPEWADK|EC 0.062 . EHI_037190 323 SQEESYK|TL 0.063 . EHI_037190 341 NEDASGR|SW 0.150 . EHI_037190 364 SEQSSVK|WG 0.061 . EHI_037190 367 SSVKWGK|LN 0.069 . EHI_037190 379 GSIDMCK|DI 0.087 . EHI_037190 386 DIYGIDK|DT 0.064 . EHI_037190 399 VDHINVR|YG 0.110 . EHI_037190 403 NVRYGGK|KP 0.059 . EHI_037190 404 VRYGGKK|PC 0.091 . EHI_037190 441 LVQLIDR|TS 0.075 . EHI_037190 452 SDLYSEK|EN 0.063 . EHI_037190 460 NDVPELK|KA 0.065 . EHI_037190 461 DVPELKK|AR 0.091 . EHI_037190 463 PELKKAR|HN 0.108 . EHI_037190 468 ARHNELK|FF 0.100 . ____________________________^_________________

  • Fasta :-

    >EHI_037190 ATGTTCTTATTTATCTTATTGTTTCTTTCTGCTTATGCATCATTAACCCTTCATCAAAAA CAATTTTATAAAAGATTATCTCATAGTTTGAAATCTGATATACCAAACGTTAAAACATTG ACTTATACTGTTCCATTGGATCATTTCAACGCTAATAATCAAATTGATTTTGATATTCAA TACTTCATCAGCACTGATTATTTGGATAACAATAGTCCAAATGCACCACTTTTTGTTTTA TTAGGAGGTGAAGGACCTGAAGATGAAACTGGTTTACAAAATTATTTTGTTGTAACTGAT TTGGCTAAAAAGCATAAAGGATTAATGTTATCTGTTGAACATCGTTTTTATGGTGCTTCA ACTCCATCACTTGAAATGGATAAATTAATTTATTGTACTGCAGAACAAGCATTAATGGAT TACGTTGAAGTTATTTCTCATGTTCAAGAAGAAAATAATTTAGTTGGACATCCAGTTATT GTTCTTGGTGGATCATATAGTGGTAATTTAGCTGCTTGGATGAGACAAAAATATCCTAAT GTTGTAGAAGGAGCATGGGCATCATCTGCTCCAGTAGAAGCTGTAGTTGATTTTTATCAA TATCTTGAAGTTGTACAAAATGCACTTCCTAAAAACACTGCAGATTTATTATCATTTGCA TTTGAACAATGGGATAAAATGACTACTACTGAAGAAGGAAGAAAAGAATTAGGAAAGATT TTCAATACTTGTACTGAATTTGGTGAAAAAGATATTCAAACATTTGCAGAGTCTATTGGA ACAGCTCTTTCTGGTTATGTTCAATATAATTCTTCAAATTGGAAACCTTCATATGAAAGT ACTGATTCAATTTGTGCTGAAATTAATGAGGATATTGTTAATAAATACCCATTATTTATT AAAGAAAAATATAATCCAGAATGGGCTGATAAAGAATGTACTCCATCTTCTCAAGAAGAA AGTTATAAAACATTACAAAATACTTCTACTTATGCTGAAGGAAATGAAGATGCTTCTGGT AGATCATGGTTTTTCCAAACATGTATTGCTTATGGATATTATCAAGCTGTTAGTGAACAA TCATCAGTTAAATGGGGTAAATTAAATCAACTTCAAGGAAGTATTGATATGTGTAAAGAT ATTTATGGCATTGATAAAGATACATTATATAATGCAGTTGATCATATCAATGTTAGATAT GGAGGAAAGAAACCATGTGTAACCAATGTTGCATTTACAAATGGTAACACTGATCCTTGG CATGCTCTTGGAGTTACTGAGTCTGATCATCAAGAAGGTAATTTAGTCCAGTTAATTGAC AGAACATCTCATTGTTCTGATCTTTATTCAGAAAAAGAGAATGATGTTCCAGAATTAAAG AAAGCAAGACACAATGAACTTAAATTCTTTGCTCAAGTCCTTGCTAATGTCCCTCAAAAT TAA
  • Download Fasta

  • Fasta :-

    MFLFILLFLSAYASLTLHQKQFYKRLSHSLKSDIPNVKTLTYTVPLDHFNANNQIDFDIQ YFISTDYLDNNSPNAPLFVLLGGEGPEDETGLQNYFVVTDLAKKHKGLMLSVEHRFYGAS TPSLEMDKLIYCTAEQALMDYVEVISHVQEENNLVGHPVIVLGGSYSGNLAAWMRQKYPN VVEGAWASSAPVEAVVDFYQYLEVVQNALPKNTADLLSFAFEQWDKMTTTEEGRKELGKI FNTCTEFGEKDIQTFAESIGTALSGYVQYNSSNWKPSYESTDSICAEINEDIVNKYPLFI KEKYNPEWADKECTPSSQEESYKTLQNTSTYAEGNEDASGRSWFFQTCIAYGYYQAVSEQ SSVKWGKLNQLQGSIDMCKDIYGIDKDTLYNAVDHINVRYGGKKPCVTNVAFTNGNTDPW HALGVTESDHQEGNLVQLIDRTSHCSDLYSEKENDVPELKKARHNELKFFAQVLANVPQN

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_037190317 SCTPSSQEES0.996unspEHI_037190317 SCTPSSQEES0.996unspEHI_037190317 SCTPSSQEES0.996unspEHI_037190362 SSEQSSVKWG0.995unspEHI_037190450 SSDLYSEKEN0.995unspEHI_03719029 SRLSHSLKSD0.993unspEHI_037190277 SNWKPSYEST0.996unsp

EHI_037190      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India